Array 1 124558-122942 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDR01000004.1 Clostridium sp. AF37-5 AF37-5.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 124557 36 97.2 29 .................A.................. CGACTAAAGTTGCCTCCGCTTCAGAAGCT 124492 36 97.2 29 .................A.................. TCCTCTACGGTACGTTCCACGTCCTTTTG 124427 36 97.2 29 .................A.................. TTTGAAGATATAGTTTTTACCAAAGATGG 124362 36 97.2 30 .................A.................. AATCACTTCTAAGGTACTCAATACAGTAGA 124296 36 97.2 29 .................A.................. ATACAAATGTAAAAAGTGCAGAAATGGCA 124231 36 97.2 30 .................A.................. GAAGATGATGTGATTCTACATTTGGGGGAT 124165 36 97.2 30 .................A.................. TAAAGTTGTGCAGAAAGTAAACAAAAAATG 124099 36 97.2 30 .................A.................. TATTGCCTTTGGCAAGCATCCCCGACTGTC 124033 36 97.2 29 .................A.................. CCACCAAGCAATTCATTTAACCCTTTAAG 123968 36 100.0 30 .................................... AGATTATCGCAGGACACAAGAGACACCGCG 123902 36 100.0 30 .................................... TAAAAGAGTATTAGAAAGCAGGTGGTAACA 123836 36 100.0 30 .................................... GAAGTAGTCAAGATTACACCAAGCAAGACT 123770 36 100.0 30 .................................... CACTTTACAACGTACCATCTTTGATACATG 123704 36 100.0 30 .................................... ATGGTAAATTTTATTTATCAACCGATATGG 123638 36 100.0 30 .................................... AGTTTAGTCATGCGGCTAAAAAAGCACTCA 123572 36 100.0 30 .................................... CCGTTTGCAAGTATAACTTTGTGCAATTCG 123506 36 100.0 30 .................................... AGTATTTTAGTCTTGGTTTTGAACAGTTGG 123440 36 100.0 30 .................................... CAGTTTGCAAATATAATTTCGTGCAGTTCG 123374 36 100.0 30 .................................... AAGCATATTCTTCATTCATAGCAGTTTCGA 123308 36 100.0 31 .................................... TCTGTATCTGTAAACACACTTCCGAGAATGG 123241 36 100.0 30 .................................... GGTCTCCATGTTCGTGGCTTACAATGCATC 123175 36 100.0 30 .................................... AGAATTTAATTACTACTTTGTCCGGCAAAG 123109 36 97.2 30 .................A.................. TCAGAAAAGATTGGGCGCGACATTTCCCCA 123043 36 97.2 30 .................A.................. TCTTGAATGGTTGCCCTTCTGTCTAATAGG 122977 36 83.3 0 .............A...A.C....C...T.A..... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 98.1 30 GTTTTAGTACCTGGAAGGATTGAGTTATCGTAAAAC # Left flank : TTTAAAAAATATAGAAACGTTATTGACTGCAAGAGAATATAAAGAGTTTTGTGTATTTATAAAAAGGTATATCAAGGAAACTTCTGTTTGGATAATATTGTCAATAATATTAAATGAATACGTTGATTTTTCCGTGGAGTATTTTCATGGGATAAATGTTGTTAATGATGGAGTTTTTTGTTTTCCGACAAAGGAACGTTTAGAAGAATTCCTCGAAAGAAATTATCCGTCGAATTTGTTTCGAAATAAGAATGTAGATAAACTTATGTGTGAAATTGTACATAAAATTGGCAAATCAAATAACAGTATATTATTTGATTCATTTGTTATTCTTAAATTATTGAATAAAACATTATGTATTAATCAAGGGGAGATATCTGGCTTGAATAGTATGGAGTATGAGTTTTTGCACGATAGTGATTTTTGAAATAGTGTTGCGATTATTAAATATGTAATATATAATTATAATAGTATTAAAAGTGAAGGGGGGCAAATTTGAT # Right flank : TATGATTAAGGATAAAAATGCGCTGAAGAAGTTTGGTTATTGTAAAATTTATCAAGTTCAATATAATAGCAATTATTATTTTTGTATCAAAGAACGCATTATAGATATACAAATGATAAACAATAATATTTTATATATAGAGTAGAAAAAAAGAAAGAGAGGAATATACTATGGAAAGTATTTTAACGGCATTGCTATCTTCTGCTGCTTTGACAGCAGTGTTTATGAAACTATTTAGCAATTATGAAGAATTAAAATGTGAGGTGAGGTCACTCCCCTTGTGGGAGTGTGGATTGAAATAATTCAGCACATATATTCATACAGGAGGTTGATTGTCACTCCCCTTGCGGGAGTGTGGATTGAAATGCCTTTCTGCCAACTCCCCTTGCCACCCACCCCCAACTCATGTTACACTAAGACCAAACATTTCAACCGAAAGAAGGTGGCTGCTATGGGATTTTTTAAGAAAAAAGAAAAGGCTGCACCAAGTGGAGATTTTG # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTGGAAGGATTGAGTTATCGTAAAAC # Alternate repeat : GTTTTAGTACCTGGAAGAATTGAGTTATCGTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //