Array 1 44870-46459 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMM01000006.1 Acinetobacter bereziniae strain TUM15247 sequence006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 44870 28 100.0 32 ............................ TATTTTAAGGGTGCATATCCTGCATTAGAAGC 44930 28 100.0 32 ............................ AGTACCGTGTGAATGCGAGTTTGAATTCTTTA 44990 28 100.0 32 ............................ TTTAGTTAAAAATAATTTAGATGAATTTTGAG 45050 28 100.0 32 ............................ TTTATTCATTCCGTTCTCAGGTGTGAATTCGC 45110 28 100.0 32 ............................ ATCCAGCTCGATGTCGATTACAAATGTCGTGA 45170 28 100.0 32 ............................ GAAACATGAAACGTGGGTATAACAATGAAACC 45230 28 100.0 33 ............................ TCTTAATTAATACGGCTTAATAAAATTTCCCAA 45291 28 100.0 32 ............................ GCAGCGTGGACAGATGTCGGGGGTCAGTCTCC 45351 28 100.0 32 ............................ AACCAATGAAAACCCCGAGACAAATAGCAACG 45411 28 100.0 32 ............................ ACAGTATGGTTGAACTCGTTGGCTACGGTGAA 45471 28 100.0 32 ............................ GCTTGAAATCATCACCTCGCGAACGTTATCCG 45531 28 100.0 32 ............................ AACCCCGATTAAACGCCCCCATTCGATTAACG 45591 28 100.0 32 ............................ GTGACGGGTTAGAATCTTCGGTCTATCTGAGT 45651 28 100.0 32 ............................ GCCCTGAGATCGTAAAGTTAAACTAATATCCT 45711 28 100.0 32 ............................ TTAGCTGTATTGGACCAGTTAATTCCTGTTTG 45771 28 100.0 32 ............................ TGAAGGGTTTGTTTTTGTGCCGAAAGAATTGA 45831 28 100.0 32 ............................ TCAACGCACCCATGCGGTGTGGTACGGTCGAC 45891 28 100.0 33 ............................ TGTTTGTGTTCCAGTGTCAGGGTCAGTTTTATT 45952 28 100.0 32 ............................ GACAGTCCAGTTAATAAGACGAATATCAGACA 46012 28 100.0 32 ............................ ATTGTGCGGGGGTGGACCTTGTACTTAATTGA 46072 28 100.0 32 ............................ TTGAACGGTATAGATCGCAATAAATCCAGATT 46132 28 100.0 32 ............................ TTGCCAGTCCCAACGAATTAGATAATTCCAAT 46192 28 100.0 32 ............................ TCAACAGGTAGGCTAGAGATCGTTGCACTATC 46252 28 100.0 32 ............................ TACAACCAAGCATGTCGCTATCACATTGGCAA 46312 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 46372 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 46432 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCTAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATCAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 40-1508 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMM01000068.1 Acinetobacter bereziniae strain TUM15247 sequence068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 40 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 100 28 100.0 32 ............................ TAAACTTGCAGTTGAACATCTGCTTTAGCCGC 160 28 100.0 32 ............................ TTAAAAATTTGATAAGAGAAAAAAGACAGTGT 220 28 100.0 32 ............................ AGACTTAGAAAAATCGGGGGTGGCTGTCTTAG 280 28 100.0 32 ............................ TTGTAGCTCCAAAACTGTTCGTTTCATGACAA 340 28 100.0 32 ............................ TTTATAAAGTGATTTTGGTTCTGCTGGCTGAT 400 28 100.0 33 ............................ AACCCAAGTAAGTGCAGAAGGACCAAGTTTTAC 461 28 100.0 32 ............................ ATTCAACGATCAACAAAAGTTGCATGGATTCG 521 28 100.0 32 ............................ TGAATGTAATATGTATACATGTTCAAAGCAGG 581 28 100.0 32 ............................ ATTTTCTGGTCGGGAAAACGGCATTTTAATAA 641 28 100.0 32 ............................ AATCTAATCAGAATTTGATTCAAGAATGAAAC 701 28 100.0 32 ............................ TTTCTCAAATCTTGTTCTGCTCTGCTCAATCG 761 28 100.0 32 ............................ TTCATCCGTGCATATGTCTGAGGGGCTTCACC 821 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 881 28 100.0 32 ............................ AAAACTTGCAGTTGCACATCTGCTTTAGCCGC 941 28 100.0 32 ............................ AATAATATGACTGAGTAATTGAAGCGGATATG 1001 28 100.0 32 ............................ TTGTTATAATAATAAGCAACGCAAAAGCCCAT 1061 28 100.0 32 ............................ ATTTTCAAAATTTAATGTCGCCGTTTTGGTCG 1121 28 100.0 32 ............................ TTGTACAGCTTGTGATTCATCACTATTTCCAC 1181 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 1241 28 78.6 32 .C...C.G...T.....C.......G.. TATACGTCATGATATTGAGCAAATATTACTCA 1301 28 92.9 32 .....C...................C.. TTGCAAAAGCAGCTTTGGCTAGTGCAATGGAA 1361 28 85.7 32 .....C.G..A......C.......... ATATTATTTTTAGGGGAATAACAATGAATGAA 1421 28 89.3 32 .....C.....T............A... ACTACGAGCTGATAAGGGGATAGACATATCAC 1481 28 75.0 0 .....C.....T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 96.9 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TTAGAAATTCATCCGTGCATATGTCTGAGGGGCTTCACCG # Right flank : ATATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACATATGGAATAATTTTTACAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAATACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.10,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 434-46 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMM01000094.1 Acinetobacter bereziniae strain TUM15247 sequence094, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 433 28 100.0 32 ............................ AGTGAATCACGCATGAATATATAATCAGATTT 373 28 100.0 32 ............................ TTGGTCAGATACGATCTTCGCCACAGTTTCAA 313 28 100.0 32 ............................ AGTGTAATGCGTTGGAACGGATTCAAAAGGAT 253 28 100.0 32 ............................ ATTTGTTGCTTGGTTATTGCGAGTTGCTCAAG 193 28 100.0 32 ............................ GATATCATGACTTTTTTTAAAAAAATCTTGCG 133 28 100.0 32 ............................ GATTTGACATGCTGTTCCCCTGAATTTAAAAA 73 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTGGTAGACTATGTTCATATCACTCAACCACGAGAAGTTCCAAAAACAAAAATCACTGGATATGCCCATTATTTCCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAGCATTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGTTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAATGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTCCACTCTTTAACAACTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTAATCTAAAATTATA # Right flank : ATTGAGGGTCATTCTATGAAAGCTCTTGATCATGTTCATTACCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1650-780 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMM01000100.1 Acinetobacter bereziniae strain TUM15247 sequence100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1649 28 100.0 32 ............................ CAAGACTTCAAGAATGGGTTAAAGGTCTTTTA 1589 28 100.0 32 ............................ AAAAGGCTAAAAGCAAATGAGCGTAGATAGTA 1529 28 100.0 32 ............................ AGTGGCTCAATTGGTTGCTTTGGATTTTACAG 1469 28 100.0 33 ............................ AATTAAGCTTCTGTGGGATTGATACAGATACAA 1408 28 100.0 33 ............................ ATGTACACCCTTACAATCTCGGGTGAAAATACA 1347 28 100.0 32 ............................ AAAGACTACAAACCAAGCTGCAGACAATCACA 1287 28 100.0 32 ............................ ATAGCTGTATGAGATGTAGGTAATCTTTCCCA 1227 28 100.0 32 ............................ AAGCGTTTGCAATGTCGTTTGCCATATCCTCA 1167 28 100.0 32 ............................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 1107 28 100.0 32 ............................ AACAACGGCAGAATTAGAGGGTACAGCTTTAT 1047 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 987 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 927 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 867 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 807 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTTGCTTAGAAACCTTACCAAAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //