Array 1 249568-247476 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMFV01000001.1 Mesorhizobium sp. Root552 contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 249567 32 100.0 38 ................................ TGTCCAGCCGCCTCCAGCTTGTTGCTGCAAATGATGAC 249497 32 100.0 35 ................................ GCCTCCAAGCACATCAGGCAGGATATGGTCGACCT 249430 32 100.0 34 ................................ TTTCATTAGCCGATATAGCGAGCCGGGCACTTGG 249364 32 100.0 34 ................................ ATTGCATGGGTAGGCTGTCAGGATCGTTGCTGGT 249298 32 100.0 35 ................................ ATCACGCCGGAAGAACTGGCATCGAAAACAGGCTG 249231 32 100.0 37 ................................ TGGAGCGCTCCGCCCATGACTAACCTCATCGCCACGC 249162 32 100.0 34 ................................ TCCGCATAGCGGCGCTTGCAGACGAACACGTCAA 249096 32 100.0 34 ................................ TGTTTCGTAGACGCCACTCATACCGCCTCCAGGA 249030 32 100.0 34 ................................ GCGGCGCTGTTTGTCTTCTGACCGTAAACGGTTG 248964 32 100.0 33 ................................ TTGGCTAGCTCAATATTTGCAAGCGAGATTTGC 248899 32 100.0 34 ................................ CTCTTTCTCGCGCATGAGCCGGGCGACGTGCTTG 248833 32 100.0 34 ................................ TCGGTTCGGGATATAATGTTCTGCATCTGGTCGG 248767 32 100.0 34 ................................ TCCTGTGGGAATGGCATCAAGGAAAGCGGCGTAA 248701 32 100.0 34 ................................ AGACGAAACGGCACAAGAGGCTGCGCAGGCCGTT 248635 32 100.0 35 ................................ GCAAGCAGGTGTCTGATGCGGTGGGGGCGCTGGAG 248568 32 100.0 35 ................................ AATGCCATTGCTTTGCTCCATTCCTGACAGCCGAG 248501 32 100.0 33 ................................ ATGGGCGGCTCGACAGTGGTGCGCATCATCCGT 248436 32 100.0 34 ................................ TTCGCCTTCATGGCCCGTCGCCGTGCATCCCGTA 248370 32 100.0 34 ................................ CATGCGGGGGCATGACGCTCCGCGACTGGTTCGC 248304 32 100.0 34 ................................ TCCTGTGGGAATGGCATCAAGGAAAGCGGCGTAA 248238 32 100.0 35 ................................ GTCGGATGATTAACAAGCTCCATAAAGGTTTCGTT 248171 32 100.0 33 ................................ CGGTCTTGCCGCTCGTTTTTGAAGGCACGTAGC 248106 32 100.0 35 ................................ GAGCGCTTCAACGGCTCGCTCGATGTGCTCAACCG 248039 32 100.0 35 ................................ GCTGTTGGTGTGTTCACCAGCATAGTTGGCGCAAT 247972 32 100.0 34 ................................ AACGACCATTTGAAATCCATCAGCCCACGAGAGG 247906 32 100.0 37 ................................ TCGCGCTCAAGAGCTTCGAGGCGGTCGGCGGCTTCGC 247837 32 100.0 34 ................................ AAGCTGTAGAGGCTGGACTTGGAATTCTCGACGG 247771 32 100.0 34 ................................ ATCGCGACATGCGCGAGGCCCGCCCTTCGGCAAG 247705 32 100.0 33 ................................ ACGGCAATACCGCGAACCTCGTTCTGGGCACGG 247640 32 100.0 34 ................................ ATCGAAGCGCTCTTGGGGTTCGCTGGGCCGCTGG 247574 32 100.0 35 ................................ TCCGCAAACTAGTCAAACGTTTCACGAAAGGAAAC 247507 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 32 32 100.0 34 GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC # Left flank : TTCTTGTCACCTACGATGTCGCCACCAGTGGGGGCAACGGCGCGGCCAGGCTGCGCCGGGTGGCGCGGGCCTGCCTCGATTTCGGGCAGCGGGTGCAATATTCCGTCTTCGAGATAGAGGTCGACCCTGCCCAGTGGACACGGTTGAGGGCACGGCTGGAGGGGCTCATTGACCCGCAGACTGACAGCCTACGCTACTATTATCTGGGTTCCAACTGGCAGCGTAAGGTGGAACATATCGGCGCCAAGCCGGCGGCCGATCTGGGCGGCACCCTGATTGTCTGAGGCACGGGCGGACGCTTGCGACCTCACAACGCATGCCGGCGCGAACCCCAAGCGTGCCGGAAAATCCCGGTAGGTTCGCACCTCGGCCAGTTCTTTGAAATAGTGAAGCTTTTTTGGTCCCCGCCGCCTGGAATCGGTGATGCCTGTGCATTTCTGCCCGGGTTCGCGCCTGACACCCTATTTACCCCGTCTAGCCACTGGGTTAGCTCTGTGACA # Right flank : AGTGAGATTGCAGATGGGGACGTTTAGGCTCATGCTGCGGGAGGTTGTCCAAGCCGCATGACAGTGGCTGAAAAGTTTGACCCCAGACTCTTTCTCCCGCCGTTATGCATCACAAAAGTACGACTCGAACGACGAAAATAACTCTGCATTTACAGTGGCTTGCAACTCCGTACCAAATCCGCGCAGTCAAGAGGTTTGGAGAATATCCGCCAGGAGAGAGCAAAATTGGCGATTCGGGCAGACAGCGCAGTCAACAGCTTTGGGCCGAAAACCCGCAGTTCTGCGCCTTTCCGGGCGTCAATATTGGCGGCAGAGAATATTGGATCGTATAGGACTGGCGGAGAAGGAGGGATTCGAACCCCCGATACCCTTGCGAGTATGCCGCATTTCGAGTGCGGTGCATTCAACCACTCTGCCACTTCTCCGCGGGTCGTGGTCGCCATGTCGGCGCGGCGCACTAGATAGCGGCAGTATCGCCTAGAGACAAGGCCAAATCCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.70,-4.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //