Array 1 39146-36596 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALAB01000027.1 Alishewanella aestuarii B11 155.AEST.1_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 39145 28 100.0 32 ............................ TGCCAGAAACCCGTTGCAGCCGCAACCGTTAC 39085 28 100.0 32 ............................ TGATCATCAAGGTTTAAGTCTCCCTTGATAAC 39025 28 100.0 32 ............................ TGCGCCTCCAGCTCCAAAATCCGCTGCTCTGC 38965 28 100.0 32 ............................ GCAACACCGATGCCAACCTTCAAAAGCACATC 38905 28 100.0 32 ............................ TGACTGCGCTCAAGTAGCGCGATGAATGACAA 38845 28 100.0 32 ............................ TGCAACGGTAACGTAAGATGGTTCAGACTCCT 38785 28 100.0 32 ............................ GCCACGTAAAATTTCGCGGTACTTGTTATAGG 38725 28 100.0 33 ............................ CACTTGGGTCACGCTTTACCTGTGGTTCGCCGT 38664 28 100.0 32 ............................ ACGCAGCGGGATCAGATATTCACCGGCCGACA 38604 28 100.0 32 ............................ ACGAAACCATATACCTGGTACCAACCGATTAC 38544 28 100.0 32 ............................ CTGCTGAACCAGCAGAACCCGAACCTGAATGT 38484 28 100.0 32 ............................ AAGCTGCAAAAGGCGGCTTTTGTGCTTGTAAT 38424 28 100.0 32 ............................ GCGCACGGAAGAGACTTCTTCTTGTATATACA 38364 28 100.0 32 ............................ TTGAATGGTAACACGACCAACAAAAGTATCTT 38304 28 100.0 32 ............................ ATAACTTCAACAGCGTAACCGGCCAGCGCCAA 38244 28 100.0 32 ............................ CCTCCCGGACGCCCCACAAATCTAGGCTTTTT 38184 28 100.0 32 ............................ ATTACCTCGACAGCGTAACCAGCCAGGGCTAA 38124 28 100.0 32 ............................ TTTGCAGTGGTTGAGGCGTTTCAGTTCGCTTT 38064 28 100.0 32 ............................ TGCACTGAGGATCGCGGTAAGGAGCTGCGCAT 38004 28 100.0 32 ............................ TCGAATTGCGCCTGAAGTTTGCAGCACAGCGT 37944 28 100.0 32 ............................ AATTCCGCGCAGCTAAGCGAAAAATTCAGCAG 37884 28 100.0 32 ............................ TGTGCGACGCTAACCTGTGCGGCGCTAACCTG 37824 28 100.0 32 ............................ TCATAGACGCCATCATCACGTAACCACGTAAC 37764 28 100.0 32 ............................ TGTACGGCGTTGTTAATTCTCGCTTCTGCATC 37704 28 100.0 32 ............................ ATATTGGCGTCAACAGAAAGCACCTGCTCCCA 37644 28 100.0 32 ............................ TGCAACATGGCTTCTGCTATGTCTTTTAGCCT 37584 28 100.0 32 ............................ AAGCTAACCATATGCCTAATGGCCTTTTTAGT 37524 28 100.0 32 ............................ TCAGCAGCCAGCCTTCCGTCCTTTGTGACGTT 37464 28 100.0 32 ............................ AGTTTAGAGCGTACAGCCGCCGCTGTTTTACC 37404 28 100.0 32 ............................ TATGTCGGGCCAGGCCGTTGCATTGCCTACCC 37344 28 100.0 32 ............................ ACTAGCAAACCCCCGAAACAGTGGTCGGCTGC 37284 28 100.0 32 ............................ GGATCAAACTGCATGGGGATGGATCTTTGGAT 37224 28 100.0 32 ............................ TGCTCGGATGGCGAGTCCGGAGTCGAGCAGGC 37164 28 100.0 32 ............................ GTTTGGCAGGATCAGCCCGTGGCTTTGGTTCC 37104 28 100.0 32 ............................ AATGGCACCATTGGCACCTTTATGGCCATGCT 37044 28 100.0 32 ............................ TCTCGCGGCAACCGCGCCCGCACTCATTGCAG 36984 28 100.0 32 ............................ AACACCACAGCCGAACAAGTGGCACAAGATAA 36924 28 100.0 32 ............................ ATGCTGAACTAAACCGAACTTGGATCCAGCGC 36864 28 100.0 33 ............................ CCTGGACAATCTATTTCATTAAGAGCTACTGCA 36803 28 100.0 32 ............................ AGCACGACGTACCCGACGACTAACACCCTGAT 36743 28 100.0 32 ............................ TGGCTGAGCTGCAAAGCCGGCAGATGATCACG 36683 28 100.0 32 ............................ TATCTCGTCAATCAGGTCACGTATCACATCAC 36623 28 71.4 0 .G.....A......GA...AT...T.G. | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.3 32 CTTCACTGCCGAACAGGCAGCTTAGAAA # Left flank : TGGAAAAGCTGATGGCTGAAAATTGGCTAAAAGGGCTCAGAGATTACTGCCAATGCAGTGCGATACAGCCAGTCCCTGCTAATGCCAAGCAGCGTTACTTTGCCAGACGGCAAGTAAAAAGTGCACACAATAAGCGTCAGCGTTCAGTCAGCAAAGGCTGGTTAACACAGGAGGAGGCATTGGATAAGATCAGTGACGAGTCGCAAAAACTTTTGAAGCTGCCATTTTTGCAATTAATCAGCCGAGGTAATAAGCAGCAAATGAAAGTGTTTATAGAACAGGGACCGGTAGTTGAGCATGCAATAGTAGGTAGTTTTAACTCATACGGGTTAAGTCGATTATCTGAAAAAATAACAGTTCCTTGGTTTTAACCCTTTTTTTGACCAATCGCTGGCAGCCCTTACCATATAAGGGCTGCTTATTGCCTCTGTAAAAAGGGTAAATCAGACATAAAGTATAATGTTCTTTAATAATCAGGTTATTAGTGCTTAAATACGCTA # Right flank : TCGTAAAATTCTGTTAAAAAGGGATTATGGAATTAATTTATAAGCACGCCGGTAGTGTTAAATAAAGCAGCTAATGGCGGGGGTCGAACCCGCATAAACGATCATAACACCGCCGCTTTACCATTAAGAGTACACTAGCTGCCCCAGTAATATAGAATATGGCCAAAAAGAGTGCTACAGCTTTAGTGTAATAATTGAGGAGCTGTGTAACTTCGATGCATCCTTCGCATGCTCCGGGTTAGTTGATATCGCGGGAATTCGGAGCGCTATATTTCAGTGGAAGCACGATGAGAATGAAAAGAGTAACGAAGTATTGCCAAAAGCAGCTGCCAAGCAATCCCAGCTTGATAAAAGCTGAGTTTGTTTCCATAAACTCAGAGATCCTTGCTACAGATTCGGGGTTGACAGCCTGGCAGTGCGCAGTTCTTACCTCTCGTTTAGACGATTACAAAAAAGATCCAGAACAAGGTGAAAACTGGGATTCTGTTATCACTGAACTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9612-8529 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALAB01000029.1 Alishewanella aestuarii B11 155.AEST.1_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 9611 37 100.0 32 ..................................... GAGAGAAGTGACTGCCGTACACTCTCACACTA 9542 37 100.0 32 ..................................... ATAATGGAATTAAGTTGCCTGCAGGAGTTAAG 9473 37 100.0 32 ..................................... ATAGAATTTATCCGCTGGTACAGCGCATCCTG 9404 37 100.0 33 ..................................... TTGGCTCATAGCCTCCGCCATAGCCGGATTAAC 9334 37 100.0 33 ..................................... GGCCCTGGACGTGGGCCTGAATATCGACTAAAT 9264 37 100.0 35 ..................................... CGCATGATGATGTGGAACAATCTATCGTTGATGGT 9192 37 100.0 32 ..................................... TTGGTTATACCACGACCCCCCGCATATTTCAT 9123 37 100.0 33 ..................................... CTATGCCGCCAACATCATACGCGAGGCTTACGG 9053 37 100.0 32 ..................................... GAGGTCGCGGGTTGAGCAGGAGCTGGTTTAGC 8984 37 100.0 35 ..................................... GTAGTGCTTTATCTGCTAACACTTGAGGAAGTAAA 8912 37 100.0 33 ..................................... TTCCTGCGCTTGTGGCAGATACCGTGGGTTATC 8842 37 100.0 32 ..................................... AATTTCAACCAGGTTTAGTACGTTCATATTTC 8773 37 100.0 33 ..................................... TCGATCCGTGAGCCTCGGTCTTAACTTGCTTTG 8703 37 100.0 32 ..................................... GTAATGGCAGAGATAGTAAAGCTGGCTTGTAC 8634 37 100.0 32 ..................................... TATAATTGCCGCAGATCATCTCATAAAGCAGC 8565 37 67.6 0 ..........C...............TAAGCGTCCGG | ========== ====== ====== ====== ===================================== =================================== ================== 16 37 98.0 33 GTCCAACAGCTGCCCCGACATAACAGGGGATTAAGAC # Left flank : AAATCTTGAGGTAGTGGCATGAAGTGTAAAGAGCACTGGTATCTAATTAGCTATGATATTCGCGAAAAACGGCGGTTGGCCAGAGTGTACCGCTACTTAAAGCGGTTCGCTTTTATGCTGCAAGAGTCGGTGTATTTATTCGCTGGCGATAAAGCAGCCTGGCAAACGCTAAAGCAACAGCTGCTCAAACGCATCAAAAAGTCTGAGGATGATGTTCGGGTATATAAGTTAGATAAAGATAGCTGTTTACACTTTTTTGGTAGCACGCCCTGGCCGCAAGGAGTGTATTTTGCTGGCTACCCTCGCCATACTTTTACACCCTTGCCAGAAGGTAATAAAGATACTGTGGTAATTGGTTGAATTAATACTACAAAGTAGTATAGTTAGACTGCTCTTTAATAAATTATACGCTCAAAAATTAGCCAATTAACTGGTTAAAAAGTAATCAGTTATTTTCTGTTGGAACTAATTGTTTTTTAAAATAAAAAAATCATGTTAGA # Right flank : CGATCACAGGTAGGTGTTCTAATTTAAGTGTCCGCTTAATTTTTAGTGGACACTTAGTGTCTTAGATAGCATCACCTGCTGGGTGATTTCGTTTTGGTATAAGGCATTGCAACCGGCATAGGTATTCATAAGTCTCACAGTTGGCAAAAGTGAGCACTATGATGCGTGATCAGTTAGCAAATAAAAGATGTGTTCGCCAGACGCTTACAAACTCTGAAGGTATACGCCAGCTATAAATTAATAATTATCGATGCAAATATTGATGCGGTAATTGTGCTAAGCTTTTATAGGGCACTGAAATTACGAGTTTTAAAGAAATATGCCTAGCTCAGTTATTGATGCAATTATTGATTTTTTACGGCGTGAACCTGCAAATTCAAGCGAAATCGCCAGCTTTTGTGGTTGCGATCGTTCAACGGTGACACGGCATCTGAAGCGACTTGAAAAGCAACTCGTTACGACAGGCCGTGCCCGCTCTACACGTTATTATTTACGCAAGG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAACAGCTGCCCCGACATAACAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.00,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 29594-28640 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALAB01000029.1 Alishewanella aestuarii B11 155.AEST.1_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================================== ================== 29593 37 100.0 35 ..................................... AACGGTTGTTAACGCTTTCACAGCACCTGCTTGAT 29521 37 100.0 34 ..................................... TTACTGACGCTGTATCAAAGAATGTAGCAGCATG 29450 37 100.0 32 ..................................... ATTTCTTGATACATACGAAGTTCTTCCTCTGT 29381 37 100.0 32 ..................................... AATAAACATTGAGCAAATCGCTCAGTAATAAA 29312 37 100.0 33 ..................................... TGTGGGACCGGGTAAACCCAGTTGCCTGAATAT 29242 37 100.0 35 ..................................... ATGATAGGACAATAAGTCCTAATACTTGCTCATCG 29170 37 100.0 32 ..................................... CTTTAAGAGGCGCTGCCAATCCAAGTCCGCGC 29101 37 75.7 103 ...................CAC..T.C...GC...TG TGGAACCGCTTTAGCGGGCCCCGTAGGGGTGAGCCACAGGATGTGGCGAATACTTCACAGGGGATTAAGACTCGCATTCCGGATCTACTGAGCCCCAAAACGC A [29072] 28960 37 70.3 104 ...................CAC..T.C...GCGC.TG TGGAACCGCTTTAGCGGGTCCCGCAGGGGTGAGCCACAGGATGTGGCGAATACTTCACAGGGGATTAAGACTCAATCGAGTTTACATACCCAACACCAAAGCCG A [28933] 28818 37 75.7 104 ...................CAC..T.C...GC...TG TGGAACCGCTTTAGCGGGCCCCGTAGGGGTGAGCCACAGGATGTGGCGAATACTTTACAGGGGATTAAGACAAACTATTTCGCGAAGTGTCGTTCGATGGATTG A [28791] 28676 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================================================================================== ================== 11 37 92.9 54 GTCCAACAGCTGCCCCGACATAACAGGGGATTAAGAC # Left flank : CTATTGGCTGCACAGGCCAGAAGACGCTTAATGCAGCTGTATAAATACTGGGTATCAGAAGAGCCAGAGCAGTTAGAGGCGATAAGCCAGTTGCCGCTTGACCTTGGGCAGAGCCAGCTTAGTAACAGTCTGTACTTTGAAGACTGGCAACGGTTCTCGTTAAAACAGCAGGAGTTTATTCCACTGGGTGGTTTTAAAGGAGTGATCACCATTAGCCGTTGCAGCCCGGGTTTGTCTCAGTGGTTAAAAATCGGTGAGCAGCTACAGCTGGGTGGCAAAACCACCTTTGGTTTAGGCAGCTATCAACTGGTACCGGCAATAAATAATAGCTAAGGTTATAACGCCTTAAGCTATACAAGCTAAAGCCTTTTGGCTAATATAGTTTTGCTCTTTAATAATATGCAGATTTGTATAAAAATTAGCCAAATCACTGATTAAAAAGTAATCAGTGATTTTCTGTTGGAACTAATTGTTTTTTAAAATAAAAAAATCATGTTAGA # Right flank : TCAATCGAGTTTACATACCCAACACCAAAGCCGGTCCAACAGCTGCCCCGACCACACTGCAGGAGCACGTGTGGAACCGCGTTAGCGGGCCCCGCAGGGGTGAGCCACAGGACGTGGCGAATACTTCACAGGGGATTAAGACGGTCAATCATGTTTCGAAAAACGCCCCGTTGGGGTCCAACAGCTGCCCCGACCACACTGCAGGAGCACGTGTGGAACCGCTTGAGCGGATTCTGCAGGGAGAGCCATAGAATGTGGTGGTTGGTTTGCCTATTAAGCCCACATGCTGGCTTACGGCTCTTGGTGGCTGTTAAGGATAACTGCGCTTACGAGGTAAAGTTTATAAGGAAATAAAATACGATGAGCATAGGGCAATACTTATTAATAAGTGTGTTAACTTGGGTAGCGGTGGGGTATTTAGGCTACAGATTTTTAATAAAACCCAAGCTTAAATCATATGGTAAAGAATAAAGCCGTATTTGCCTAACGCCTTGCCAATT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAACAGCTGCCCCGACATAACAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.00,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //