Array 1 70340-67789 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHOB010000001.1 Azonexus hydrophilus isolate Isolate_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 70339 37 100.0 34 ..................................... GGCATCAAGGATGACTAATGGAAACGTTGACTAA 70268 37 100.0 35 ..................................... CGGTTTTGCCAACAATCCAAAAACCCCAACGAGGG 70196 37 100.0 34 ..................................... GTTGCGCTGGGGGCGGGGCTGTCAGGGGCGCCGG 70125 37 100.0 35 ..................................... ATTACCTCGTTCACCTGCTTGGAGTCATTCGCCAA 70053 37 100.0 35 ..................................... AACAGGGTCGCACGTTCCGCCGGCTTGCGGGCCAT 69981 37 100.0 34 ..................................... AATCCGCCCGCGTTTGACCCAATGCCAGCCGGAG 69910 37 100.0 34 ..................................... TGTTCGTCCATCAGTAGATCTCCATAAAACCGCG 69839 37 100.0 36 ..................................... CTGGCCTACGCGAAGCATTGCAGCGCAAAGCGCACC 69766 37 100.0 36 ..................................... CAGCTTCGGCACAAATTTTGCCCACATGCTCAAATC 69693 37 100.0 34 ..................................... ACCCAGGAATTCCGCAATGCGCGAGACCCGCCAC 69622 37 100.0 35 ..................................... TGGCTGATGATGAGGTCGCCCGCCAGAGCTTCGGG 69550 37 100.0 37 ..................................... TTCCACCTGCGGACCAGTAAGATCGGCTGGATTTCGG 69476 37 100.0 35 ..................................... GGTCCATTCCGCAACCGGCGGCACTTGCTCATGAG 69404 37 100.0 36 ..................................... AGATTCACCAGAAGCCGCTTGCCGTTTTATTGCACA 69331 37 100.0 35 ..................................... AGGTAATGGAAATCACAGACAAACGCCACGGGCAG 69259 37 100.0 33 ..................................... CGGTCTGGCTTCTGTTGCCGGAACAATTGCCGG 69189 37 100.0 34 ..................................... TTCCCCACCACCACGCCTGCGTTTCCGTCGTTGC 69118 37 100.0 34 ..................................... GGCTATGGCGGCGGTGCCTGCCGACGTGACCACG 69047 37 100.0 34 ..................................... AAGGCCACCGACACTATCGGCGAGCGCGTCTGTC 68976 37 100.0 37 ..................................... ATCGGTATCACGTCCGTTGTTTACCTGTTGTTCCAGG 68902 37 100.0 35 ..................................... GCTACTCCCTTACACAGCAACGGTCGGACAAAAAT 68830 37 100.0 36 ..................................... GCGTTGAGGTTCCACTGAAACGAGAAGACGGCGAGG 68757 37 100.0 33 ..................................... GGCTTGACTGTCAGCCAGGCTGGCGGATTCGGC 68687 37 100.0 35 ..................................... TCTTTCTGAGTTCGAGGAACAGGCGATGTTCTACC 68615 37 100.0 35 ..................................... CACTGTTCGCCCGCCTGCGTGGCTTGTCCGGCGGG 68543 37 100.0 34 ..................................... ATTTGTTTCTCCGGGTAATCTCTTTGTCTATCAG 68472 37 100.0 35 ..................................... CCTGCGGCCCGGGCCATCAACTACTCGGTGGACGT 68400 37 100.0 36 ..................................... TTCGCAAGCGGATCAGTCGCCGGATCACGGGCGTAG 68327 37 100.0 37 ..................................... AAGAGCCCCAGGTCTGCTTGGCTAGGCGCATAACCTG 68253 37 100.0 35 ..................................... CTGTCGGCTGCGTCCGCAAGGTACAGGACAACTCC 68181 37 100.0 34 ..................................... AAAACGAGTATCACATCCCGCGCGGTCGTATTCT 68110 37 100.0 34 ..................................... TACCCCTCACACCATGGGGCGTGGCTTACGCCAG 68039 37 100.0 35 ..................................... CCGCTTTGTGTTAATGGCGCTGCCTGGGCAGGTGA 67967 37 100.0 34 ..................................... ATCCCCACCCGCGCAGCACGGCGGGACTCCGATG 67896 37 100.0 34 ..................................... GAGCACAGAAGAACTTGCACTTTCTCGGACACTG 67825 37 94.6 0 ...........................A........A | ========== ====== ====== ====== ===================================== ===================================== ================== 36 37 99.8 35 GCTTCGCCTCCCGGCAACGGGAGGCGTGGATTGAAAC # Left flank : TGAATATCTTCCCTACCTGGTGCGCTGATGCTGGTCATCGTCTGCTACGACGTCAATACCGAAACCCGAGAAGGCCGACGCCGCCTGCGCCGTGTCGCCAAGCTGTGCGAAGGCATCGGCCAGCGGGTGCAAAAATCGGTCTTTGAATGCCAGGTCGACCGAGCGCAGTTTGAAGCGCTTGAACGCGACCTGATCGCCGAAATCGACCCCAAGGAAGACAACCTGCGCTTCTATCGCATTGCCGAATTGCGCGGCTACGAGGTCAAGGAACATGGCTGCTTCCGCGCCACCGACTTCGACGCGCCCCTGGTGCTGTGATGGCGCGCGAACCCCGAGTGCACAACTTTTTCCCGGTAGGTTCGCGCGGGCGACAAGGCACTGATTTGTCGGAGCTTCCATCCCGGCGCGAGCTTCACGTAAGATGCCGGCTGCTCAAAAAGGACGAGGTTCGCGCAATGCGGCCGAATTGTTCTTTGATCTCCTGTAGTTGCAGGAGATGA # Right flank : ATCTCAAACTTCGACACAGGAAGGGCAGTGAGGTCTATCGTATCGTGGTGCCTGTTTCGTAGTGATTTTGCCCATTTGCTACCATCCCCCCCATGAATTCATCTTCCCCCCATCCCTCCGACCCCTCTGCTTTGATCGACGCCAGCGGCCAGGTGCATGCTCCGGCGGGGGAGGGCGCGCGTATTGTGTCGTTGGTGCCTTCGTTGACCGAGCTGGTTTGCGATCTTGGCTTACGTGCGCAGTTGGTGGGGCGTACCGGGTTTTGTGTGCATCCGCGTGAGGTTTTGCGGGATATTCCGAAGGTGGGGGGGACCAAGGATGTCCGGCTGGAGGTGGTGCGCGCGCTGGCGCCGACACATTTGCTGGTGAACGTTGACGAGAATACGCGGGAGACGGTGGCGGAGCTGGCGCGTTTCGTGCCGCATGTGATCGTGACGCACCCGTGTACGCCGGCCGATAACCTGACGCTGTTTCGCCTGCTGGGTGGGGTGTTCGGGCGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCGCCTCCCGGCAACGGGAGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.70,-18.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA //