Array 1 118656-110617 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP037977.1 Rathayibacter toxicus strain WAC7056 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 118655 29 100.0 32 ............................. TCTGCGCACTGGGCCATTACTGGGCAGCGTCT 118594 29 100.0 32 ............................. TAACCAACCGACCACCATACATAGATTGGACC 118533 29 100.0 32 ............................. ATCTGGTTGGGTCGCCTGGTTTTGGGCGCGTT 118472 29 96.6 32 ............................T GAGGTTCGGGGAGAGTCCTCTAGAGCAGCTAG 118411 29 96.6 32 ............................G GGAAAGCACATTGTTAGGCTCGTTCTCAGCTC 118350 29 96.6 32 ............................A AGTATGCTCCTCCGTCAAATCGGCCTCAGCGC 118289 29 100.0 32 ............................. CTCGACGGTCTTGCCGACGGCATTACGAGTAT 118228 29 100.0 32 ............................. ACAATAGCCACACTCACCGGCTCGGCCAATGC 118167 29 100.0 32 ............................. AAAACCGAGTGCATCAACGGTCACCCGTTCGA 118106 29 96.6 32 ............................T TAGCCCTTCTTTCTAAGATACGGAGTGTCGAC 118045 29 96.6 32 ............................G GCGGCTTTCGGAACCGAGATCGATTTCAGTGA 117984 29 96.6 32 ............................T GTTAAACGTGATCCAGGCCCCGCAGATGATAA 117923 29 96.6 32 ............................T GCGAGTCGAGGCACCGGCTCACCTGTCGACCC 117862 29 96.6 33 ............................G GATTCGACGGCTTCATCCGACAGAACGTCAGGA 117800 29 96.6 32 ............................A ATTTAATCCCGCGGGCGCGGATACTTTTACTA 117739 29 100.0 32 ............................. AAGAACGTCATCCCCGGCTTTAGCGTCAACCG 117678 29 96.6 32 ............................T TCGCCTCGGCTGGCCATGTATGAGGTGAGTAG 117617 29 100.0 32 ............................. GATCGGCCCCGCTTTTTTAGGCCAACCTTTTT 117556 29 96.6 32 ............................T ACCCGCCCCGAGGAAGAGGTTAAGCGGTCTGA 117495 29 96.6 33 ............................G TCGACAATGTCGGCGTTGGTGGTCATGGTGGTC 117433 29 100.0 32 ............................. CCCTTCCCGTCACGCTGCACCCTCGTGTTTTC 117372 29 100.0 32 ............................. TCTGCGGTAGTCATCTCACCAAACGTATCCAA 117311 29 96.6 32 ............................T TGCACATCGCCCGTCGCGCCGAGGTTACCGGA 117250 29 96.6 32 ............................T ACTGATGTGGTCGCGATTGAGCTGAAGATCGA 117189 29 100.0 33 ............................. GAAGCACAACTCCGCCAGCAAGACACTTATGTT 117127 29 100.0 32 ............................. TTTTCCGGCAATCTCCGCGATATTGGTCTGGA 117066 29 100.0 32 ............................. GACAAGGCGGTCCACCGGAATAACTTGTTTAG 117005 29 96.6 32 ............................T TCCAGCGCCTTCTGAAGCTTTTTGCTGGCGAG 116944 29 96.6 32 ............................G ACGGGATGTAGTAGTAGTCCCGTCCCCCTACC 116883 29 96.6 32 ............................G CCCATCTAGAATGGGATATAAAGGGTCTCGTT 116822 29 96.6 33 ............................G AGGATGGTGGCCCGCAGGATGCTCGCGATTCTG 116760 29 96.6 32 ............................G GAATACCGACATAACCTGCGCATAAGAAGATG 116699 29 96.6 33 ............................T CCGTCAGGCGAAGCGTCGCCCGCTGTCGTCTTA 116637 29 96.6 32 ............................T AGCCGCGAGAACCTCGGCCGGTGCGCCCGCAC 116576 29 96.6 32 ............................T ACGCAGCACCCTATCCTTCAAAATCACCATTT 116515 29 100.0 32 ............................. AATACACCCGAATACAAAACAGTTAAACCGGC 116454 29 96.6 32 ............................T AGCCGTGCGTATTGGCCGGGGGTGGTTCGCCG 116393 29 96.6 32 ............................T AAATATCGAGACCCGCGAACTTATCCTTCGAC 116332 29 96.6 32 ............................G AGTGTCGGCCACTTCGCCGGGGAATTTTGGGA 116271 29 96.6 32 ............................T TCACGCGGAGAATAATCTGACTAACACTTTCG 116210 29 96.6 32 ............................T AGCGTCACCAGAATCGCGACCATCCTGCGGGC 116149 29 96.6 33 ............................A CCAGGGCCTAGCCGGAGGGCCAGGAGGAAACGG 116087 29 96.6 32 ............................T ATTTTGGGAAAAACTTTCAAAACTTTTGTAAA 116026 29 100.0 33 ............................. TTTAGCGGCAATCTGCGCGATATTGGTCTGGAA 115964 29 100.0 33 ............................. GTTACGCTCATCAGCCATACCACCGAGCTCAGC 115902 29 100.0 32 ............................. TTAAAGGTGCCGTTACGCCCAATAAGGACGTG 115841 29 96.6 32 ............................G CTATCTGCTCACAATGGCAGACCAGCACGGCG 115780 29 96.6 32 ............................G TCCGCCGGGAGGCGCAGGCGGCTGGTAGCGAA 115719 29 100.0 32 ............................. ATACGCCTAAAAGACAGAACCCGACCGAAATT 115658 29 96.6 32 ............................T TGTATTAGCCTCATCATAAGGATGACCCATTT 115597 29 100.0 33 ............................. AATCGGCCCCCGTGGATACTGGGGCTTATCGTG 115535 29 96.6 32 ............................G GCGACAGGGGCGCGCGCGACATCCCCGAATTT 115474 29 100.0 32 ............................. TTAAATCGGTTCTTGTTGACATGAGTTCTCAA 115413 29 96.6 32 ............................G CTCGTGGATGTGGTGTATGATATCGATTTTTT 115352 29 96.6 32 ............................T AGGGGTAGCGACAAAGGTTATTCAGTCGCTCG 115291 29 100.0 32 ............................. GATTGTTCGACGGAACATCATCCCAGTGGCAA 115230 29 96.6 32 ............................T GCGGGCGACTGATGAAATAGTCATGCAAAGAA 115169 29 96.6 32 ............................G GAACACAACGCGGGGAGGCATCCTAAAGGTAG 115108 29 100.0 32 ............................. AGTCTCGTCACAACCCGCCGCAATCACCGACG 115047 29 100.0 32 ............................. GCTGCGGTCGTTGCGGCGCGGCATTATCCCGA 114986 29 100.0 32 ............................. GGATTTTTCGCGGTACGTGTACAGTCGTCGGT 114925 29 100.0 32 ............................. ATCAGCCAACTATCAGAAACCCCCCCAAACGG 114864 29 96.6 32 ............................G TAGTGCCGCGAGAAGCGGTGACCCGGGCGGGA 114803 29 96.6 33 ............................G TAAAGCCCGAACAAGACTCGGGATCACCCCGAA 114741 29 100.0 32 ............................. CCGCTGACGACGGGTAGCTGGCCTTCTATCCT 114680 29 96.6 32 ............................T GCCGCGCCGCAACGACCGCGGCGTTAGGTTCT 114619 29 96.6 32 ............................T ACCTGCTCAAGATAGCAGACCAGGTGGCCGCA 114558 29 96.6 32 ............................T ATTGTAGATGTTCTTACAAAAATCCTGAAAAA 114497 29 96.6 32 ............................A TTCGTGGGTTCGCGCCCGTTTCGGGCTGCCCG 114436 29 96.6 32 ............................G TCTTCGATAAGATCTTCCGCATACTCGACGAT 114375 29 100.0 32 ............................. TCCACGGCCACTAAAACCTTCGATTTTTCTAC 114314 29 100.0 32 ............................. CGCAAGCGCTTCCACCATCAGATCGGCTACCT 114253 29 96.6 32 ............................G TGCGCTTAGCGTGGATTTGCGGGAAGCATTCC 114192 29 96.6 32 ............................T TTTGGCGAGAAGGCTCCAGACGATTTGGCCGG 114131 29 96.6 32 ............................T TTGGTCCGCTATTCTCCTCACTGATGTGACAC 114070 29 100.0 32 ............................. ACTAGGTGAAGTACCGATTCGAGACACCAGCA 114009 29 100.0 33 ............................. AAGGTGAGGGCTCGATTTTTCTACGACAACGAA 113947 29 100.0 33 ............................. GACCGAGTATCCCATTAGAGACCAGTGCCAGTG 113885 29 100.0 32 ............................. ATCGACAGGTGCCTTTATGGAACCTTCCCCTA 113824 29 96.6 33 ............................A CGCTTTAGTGGTGGTGGATCCTAAGAACGCATC 113762 29 100.0 32 ............................. CTCGCGACTGCCCGCTATTATCAGTGCGGCCG 113701 29 100.0 32 ............................. CTGCGGATCTTCCCTGCGTGCCCTGTCAAAAA 113640 29 96.6 32 ............................T TCGCCGGGTGGTGAAGTCTTTGAAGGCATTAG 113579 29 100.0 32 ............................. GGTTAGCCAGATTATTCTCCGAGTGAATTCGC 113518 29 100.0 32 ............................. ACGCACTTCGTGTGCACCGCATAGTGGCCTGG 113457 29 96.6 32 ..G.......................... CCTTAATATAGGCCCCGTCGGTCGGTCGGTGC 113396 29 96.6 32 ............................T AGTTGGCTTACGTAAAATGGTAGAACAGAGAC 113335 29 100.0 32 ............................. TCTAGGGGCAATCAGCTTCCCGGGCGTATTTT 113274 29 96.6 32 ............................T CGGTTCTTGTTGAGATGTCTTCTCAACAGTGG 113213 29 96.6 32 ............................T GCCGGGCTTGTTGAGCATAGGGACCAGAAAGA 113152 29 100.0 32 ............................. AAAACCTCGGCGCGCCAGGAAACGGCATCTCC 113091 29 96.6 32 ............................A CCGCTTCGCAGTACAAGACAAATTCACAGACT 113030 29 96.6 32 ............................T ACAAAAGGAATACCCAAGCCTTCGATTCTTTA 112969 29 100.0 32 ............................. GAATCTAACGTTACCAGGATCTCAAAGACCGC 112908 29 100.0 32 ............................. AGTTCGGGGTCTATCTCAGGCTTTGCGCACTC 112847 29 96.6 32 ............................G CAAAACACCAATTTTAGGCGTCACATATGTCT 112786 29 100.0 32 ............................. GGCTTGATGTCCTTTTCTTCCTGAAGGATTTT 112725 29 96.6 32 C............................ CCTGCGGCCCGGCCGGTTCCCATCCTTTATAG 112664 29 96.6 32 ............................T CCTTTCGAACCTCGCTCGTGAGGCGAAGAATA 112603 29 96.6 32 ............................G TTAAAGCTTTTTGCACAATGTCATCCCGGCGA 112542 29 96.6 32 ............................T AGGGAGCCTAGCGTATTGTGTAGTACCATAAA 112481 29 96.6 33 ............................A AAGGGCGACCGGATTATGGTTTTAGATAGCAAC 112419 29 96.6 32 ............................T CCTGCCGCGGGGGTTGCGCCGACTACAGTGCA 112358 29 96.6 32 ............................G TCCAATCCGCGTCCCCAGCTTTATCCCTATAG 112297 29 96.6 33 ............................T CGGAGATGAAAGCGTGCGTCTCTCGGATGGCTG 112235 29 96.6 32 ............................G TTCACCGAGTGGTTCGGGATAATGCCTCGCCG 112174 29 96.6 32 ............................T CTTTCGTGGAGGTTGCCGACGCTTCCGTTGAG 112113 29 96.6 32 ............................T TGTCACACATTCCGGGGGCGCGGTTCCAGATT 112052 29 96.6 32 ............................G TAATCTGGCCGCCGCCTACGGAAGCGCTCCAG 111991 29 100.0 33 ............................. ATTTTCCGCGCCACCAAATGGGTTACGTATTTA 111929 29 96.6 32 ............................G CCTTAGCTTTTGCCAGGGCTGCGTATGCGTCC 111868 29 96.6 33 ............................G GGGCATGCCACTATTCTTGACTATCCAGCTCAG 111806 29 96.6 32 ............................T CGTTTCCCGGCCCCCGTATATAAAGATATTTT 111745 29 100.0 33 ............................. GTGAGCATAACTGAAGCGCAGGCGTTCTCGTCG 111683 29 100.0 32 ............................. ATTGGCTGCGACAACAATCGAGTCAATCTCAG 111622 29 96.6 32 T............................ AACAAACGCGGCAGTAGCGACAGCAGACAAAC 111561 29 96.6 32 ............................T AGCCGTCAGGGCTCTTAGCGACACCCAACAAA 111500 29 96.6 32 ............................T ATTTCGGCGTTTCTTCAAACACTTATGGCACT 111439 29 96.6 32 ............................T ATCTCATACGACCTCACAATACTCGTATGGGA 111378 29 100.0 32 ............................. CCAATACTATTAATGCGCAATCCAAGAAAACG 111317 29 100.0 32 ............................. AATCTTGTCAACATCATACGAGGCCGCAAAGG 111256 29 100.0 32 ............................. CTTCCCACTAACCTCACCCGCGATAGTGCCGG 111195 29 96.6 32 ............................G AAACCATCGACCTAATCCTAGAGGCAGGCGAG 111134 29 96.6 32 ............................G GTGATCCATCACTATCAGAAGACAGCTGTGCG 111073 29 100.0 32 ............................. TAAGTTCGGGGTGGGAGCCTATAAGAACTTCC 111012 29 100.0 33 ............................. TGGTAATCTGGCGCGGGCTATAGGGAGGTCCGC 110950 29 96.6 32 .C........................... GCTCGACCGCGCTTCTTTAGACCCACCTTTTT 110889 29 96.6 32 .............G............... ATCGAGAGCCGCGAACGCGTCCTTCGACAAAA 110828 29 100.0 32 ............................. TACGTCGCTAACCGGCGACAACTTCCTTACGG 110767 29 96.6 32 ............................T CTTGCCGAAGAGTGGGTGTTGTCTAGCTTGGC 110706 29 93.1 32 .............G..............G CTCCGCAAGCAGGTCGCCGCCGACGACAAGGA 110645 29 72.4 0 ..CG.....A...G.........CAC..T | ========== ====== ====== ====== ============================= ================================= ================== 132 29 97.7 32 GTATTCCCCGCGCAAGCGGGGATGGTCCC # Left flank : GGGACGGTGCGGAGCGGACCGTGGCTTCGGGACGAAGCTATGGGGAAATCGACGACGAGGAGCCCCCGGAGGACCTCCTATGATTGTGCTTGTCCTCACCGCTTGCCCTTCTGGACTTCGGGGCCATCTTTCGCGGTGGCTTCTCGAGATTAGCCCTGGAGTATTCGTTGGTCACATCTCCGCACGGGTGCGCGACTTACTCTGGGAGCGGGTTCTGGAGCTGGCGAAGGACGGGCGCGCCATCCTCATTCACTCGACGAAGGGCGAGCAACGCCTGGCTTTTAAGGTTCACCGGCATGACTGGCAACCGACCGACTTCGACGGAGTGCAGCTCATGCTCCGGCCAGCGAAGCCCTCTGAGCAGCCCACCCCAGCCTTACGGAAAGGGTGGAGCAACGCCAGCCGGTACCGGGCCGCAGCACGCCAAAAACGCGATGGCTAAACGATCCAAACTACGTCAGAATGGGGGTCCGTCGACGAAAAATCCCTGGTCAGGAAGA # Right flank : CAGTTCGGCCACTGCCGATAACATCGCACACCTCGGGCACCGAACTAGGGCGAGCGGCACCTCTCAAGCGATGTTGCCGGTCGTCGCGGGGGTGTCCACCGCGATCACCCTCGATATGAGCGCGATCGTGTCTTCACATACCTGCGCGACGGCCATCGACGGATCCGTTCGCCTGCGTCGCATATCACCCTCCTAACTTGGGAGGCAACGTCATTGGCGCACTCGTCGAAGCTGAAACCTTTGTGACACATGGCGCTGTTGGCGTCAGCGCTGCCGTAAACACGCTAATCGCCCGCGGATTCCACTCCTCAGACCGCCCTCATCGGCGCGGGCTCGGCGCGCCTTGTCATCGTGATCGTTCTCGGCGCGACAACTGTAAAAGCAATTGTTCCTCGCAGCCGGCGGAGGCATGATTTCCTTCACGAGCGTAGTTGTTGCGGCGCCCGTGGTGCTGCCAATTGTCCTTTGGTCAGTCATTGCAATTTTGCGAAGCAGCGTCA # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCGCGCAAGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //