Array 1 84864-86904 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWSH01000044.1 Lactobacillus acidophilus strain WG-LB-IV Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 84864 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 84925 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 84986 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 85047 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 85108 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 85169 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 85230 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 85291 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 85352 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 85413 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 85474 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 85535 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 85596 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 85657 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 85718 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 85779 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 85841 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 85902 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 85963 27 100.0 34 ........................... TAAAATGTTGAAACTTATTGTCCGCTTTAACGTA 86024 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86085 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 86146 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 86207 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 86268 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 86329 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 86390 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 86451 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86512 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 86573 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 86634 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 86695 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 86756 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 86817 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 86878 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 34 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //