Array 1 46393-47213 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JVXA01000088.1 Staphylococcus epidermidis strain 125_SEPI 733_67612_1336062_534+,...,416+, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
     46393	    36	 100.0	    34	....................................	GACCAATCACAAAGACATATTAATCAAGGCGGTA   	
     46463	    36	 100.0	    36	....................................	TAAAATGTATGACATATATATTAAACCTATAGTTAC 	
     46535	    36	 100.0	    35	....................................	AAAAAAACCTGTTGACAATATCTAACATATAATGC  	
     46606	    36	 100.0	    36	....................................	AATATAAGCGTAAAAAGTATTGTCTTTATATTGACT 	
     46678	    36	 100.0	    36	....................................	TTCTGAAAGCCAACAATTATTTTAAATTCTTTTCGC 	
     46750	    36	 100.0	    37	....................................	CTTTAAGGTAACTGAAATTGATAACACTCTTCCAGAT	
     46823	    36	 100.0	    35	....................................	CATTTCAATCATATCCTTTTTAATAATTTTTTTAT  	
     46894	    36	 100.0	    37	....................................	TGTTCGTCTATGCCGTCATAATGTAAATCACTTACTA	
     46967	    36	  97.2	    34	...................A................	TTCAATAGCCCAATTAATAACATCTTTCTTCAGT   	
     47037	    36	 100.0	    35	....................................	TTAACTTCATTTTCACGACCTACTAATGGACCTTG  	
     47108	    36	  97.2	    35	...................................T	ACATCGTCAGCCATGTGGTTTGGTAAGTTTACAAG  	
     47179	    35	  86.1	     0	..........T.................G.-...GT	|                                    	
==========	======	======	======	====================================	=====================================	==================
        12	    36	  98.4	    36	GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	                                     	       

# Left flank :   GCAAAAATGGATTTTCGTTTCTTATGATATGCAATTAATCCTCCAAAAAATTAAGCATAATGAAAATTGTAAGTTTCATGCGGTTCCTCATCTTAATTTCTATGAAATGAGGTACGACCTGAGGAGTAGGTTTACTGAGAAATAATGTATTTACGCTGGGGCTTCAAGTCCAATTTAGTTTTTACATTTCATACTTGCACATTATCAAACAAAATCAATTATTAAAATAGATGTTTAAGTATTTTTCTTCTTGTAGTGAGGGAACGTCTAATTTTTATTCGAAATATAAAAAGAAATGAAAGGTTAAATTAATATTAATTTTATTAAATGAATAGGCTAAACCATCTTAAATGTAGTATACTATTAATATAAATGTAATTATTATAAAATTTGTCAAAAAAAGTGACATATCCTATAATCTTGTACTAGTGATTGTCATATTTTTTGACAGCAAAAATGATGCTTGAAATATAGTTGTGATGGCATTTGTTAAAGTATCT
# Right flank :  TGTAAATCTAACAACACTCTAAAAAATTGTAGATTTTGAATAAAATACGCATTGATTAATTTCTAGGGGATGGAAAAATGAAAGATGTTATTTATGTAGAAAATCATTACTTTGTTACTGCGAAGGAAAATAGCATTAAATTTAGAAATGTCATAGATAAAAGTGAAAAATTTTATTTGTTTGAAGAAATTGAAGCTATTATTTTTGATCATTATAAAAGCTATTTTTCACATAAATTGGTAATTAAATGTATAGAAAATGATATTGCGATTATATTTTGTGACAAAAAGCATTCTCCAGTTACACAGCTCATTTCTTCATATGGCATGGTTAATCGTCTTAAAAGAATTCAAAGTCAATTTCAGTTATCGGGAAGAACAAAAGATAGAATTTGGAAAAAGATTGTTGTAAATAAAATTTTTAACCAAACACGATGTCTTGAAAATAATTTACATAATGAAAATGTTAAGCTGATGTTAGGTTTTGCAAAAGAAGTGAGT

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [15,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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