Array 1 232508-232870 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 232508 25 100.0 41 ......................... TTTCTCTCTCTTTCACACTACGTACATGGATACAGATATAT 232574 25 100.0 44 ......................... TAGTGACACGAAGTTCACTGTATTCGACATTAAGGTAGACTATA 232643 25 100.0 41 ......................... TTGTTTGGTTGAGAATCTGCTCAATAGCGGAGTAAGCCGAT 232709 25 100.0 44 ......................... ATGAAAAATTCATGTTAAATTAATTAGAAAAATCATGATTTTCA 232778 25 100.0 43 ......................... TTCACAGTCGGTAACTGCCACACCTGGTTACCGTTAAACCCCA 232846 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================ ================== 6 25 100.0 43 CTTTCTAATCCCTTTTGGGATTTTC # Left flank : TACTGGATACTACGTATGGTCCCATTACCATGTGGATTGAGTTCCAGTGGGATCCAGCTATTCACGTATTTCTTGACGCTGAGATAATTAAAAAGAATGGTAAACTGAAGTTCATTAGGAAGCCAGGAAGGAAGGCTGTTAGGCCAGATATAGTACTAGTTAAGGGAGCATTCGATAACGTGAATGCCTTAATGCAAGCTAATAAAGATATTGACGTATTAATAGAGTGTAAGACCTTGCCTTACAATGAATGGGCTTCTGATGCGGATGAACAGGTAATGCAATACCTAAGTAACTTCAGACCCAAGAATATGGCATTAATCACAAGGTACGGCATACCAATCAACATTAAGAATAAGTTGACGAAATATGGAATAAGGGTTATAGATAACGTAAAACCAAGTAGCATGATAGAGAATGAATTAAGTAATTTCATTCAAAACGCCTTTAGCAGTCTATAACACCATGCCCAGCACATGGCCTACACATACTTTGATGAC # Right flank : CCGATTTATTGGCTTTTTTAGGGTTTTTAAATTTTACCCTATTACTTGCTTTACTCACCATCAGCACACACCATTCCACCATCCCACACCCCCACATTACTGTGCTGATGATAAACCATAACCACCCAATGGTTGTGCTAATTGAAAGAAATGAAGAATGAAAATGAAACTGTGCCAATGATAATATATAGAATATATATTCAATAGTAGGAGGATGGCCAATGTAAATGGTGAGTGTTTTGGTGATTGTGGATATAAGTGAGTGTGTTGGTTTAATCATTATAAGGCCTTATCTAGCCATAAGGTGTCTTATGCTTAATGCTGGAGTTGGGGGTTGTTGATGTGCTGATTGGTATAGGCCTTAGGCTGGTTAACATGGTATGAGGGCTAATGGTAGTATGGTTATGGATCCTAGTGGTGATGCTATATTACTTAAGAAGACTATTAGTGGTATTGTACTCCATGAGTGTTGCAATGCTTGACTTCAATTATATTAACAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTAATCCCTTTTGGGATTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 370264-370424 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 370264 26 100.0 43 .......................... ATGCAAATTCCGAATCAGAAGCAAACATTAAAGAAAATACTAA 370333 26 100.0 40 .......................... AAGCTCAGGAAACCAGCCACGATTCAAGAACTCATTTTAC 370399 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== =========================================== ================== 3 26 100.0 42 TCTTTCTAATCCCTTTTGGGATTTAC # Left flank : ATGTTCTAGGCCTTAAGGACGCCCACACCACCGAGGTTAACCCAAACACCACCCACCCAGTGATAGACATAACCCCAGAGGAGAAGAGCATTAACAAACTAGGGGGCACTATGATACTTGGTGATAGGGAAATAAGTATTACCGAGGGGAGTATTCTTCATGGAATCTATGGTTCATTAAGGATTAGGGAAAGGCATAGACATAGGTATGAGGTTAACCCAGCCTACTTTAAGCAGCTTCAGGAGGCAGGCTTAGTCTTCTCAGCCATGAGGATTGATGTACCTAGAGTGGAGGCTATTGAACTACATAACCACTACTTCTTCATAGCAACCCAATTCCACCCCGAATTCAGAAGCAGGTTAACTAGACCACACCCATTATTCACCGCCCTACTAAAAGCCGCATTAGCAAGGAAAATGGGCCTTGAATCACCATACACCGGTGTTAAACCATAACCAAAACACATCCTAATTCCTTTACTTTCAATCCCTTATTCTTTC # Right flank : CTGATTCATTAGCTTTTTTAGGGTTTTTAAGTTTTACTCCATGGTTTGCTTTGTTTACCATCAGCACAACCATTCCACCATCCCACACCCCCACATCACTGTGCTAATGGTGTAATGAAGCCCCTCAATGGTTGTGCTAATTGAAAGAAATGAAGAATGAAAATGAAACTGTGCCGATGAAAATATATAGACTATATAGTGGATGTGCTTTGGATTAAGAGGTGGGGGGTTCATTATTTTAGTGCGTTTGTTGATTATGGTTGAGGTAAAAATCTAGAGGGATGAAGGTTATTTTAAGTGGTCATTAAGGCTTTTCTTCAATAACTGGGTTTCTTAAAATACCTATGCCCTCGACCTCGGCTTCGACTAAGTCACCATGCTTTAGGAACTTGCCCTTGGGGAATCCAACACCAGATGGGGTGCCTGTGGATATGTAGTCGCCTGGTTTAAGTGTTATGCCTTGGGTTGCCCAGTGTATTAAGTCAGGTATCTTGAATATT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTTCTAATCCCTTTTGGGATTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 780147-780308 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =============================================== ================== 780147 25 100.0 40 ......................... GATTCCCTATGGAAAACTTCATGATGAGAATCCAGGAGCA 780212 25 100.0 47 ......................... TCCTCGGTGGCTGCTGCAGTCTACCTTATTGCGAATAAGAAGGAGCA 780284 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= =============================================== ================== 3 25 100.0 44 CTTTCTAATCCCTTTTGGGATTTAC # Left flank : GGAATTCCTCAGCCTCATCAGTGGCCTCCCTAGCCTTGAGTACTATTAATGCCTCAATCCTAATACCCTTGAAGACGCTGCCATTAACACTGAAGCTTAATGAGTCATTAATTATTGCCTCAGGTATGTAGACGTCCAGTAGATTCTCCATTAAATCAACCCTAACAACCTCACCATTAACAACAACCTCATAATACATTCCACCAAAGGCATTGAAGCCGTAATCCCAATCAAACTCCCTAGCAATACCCTCAAAGAACTCAGCATCAGTTAAAGTACTCTTATTAGTTAGGAATAAGTCAACATCATGAACAACCCAATCAACACCATAGGCAAGTGGAAGAATCAAACTACCAACAACAACAAAACCAACACCCCTCCCACCCAACACACCACCAACCCTAAGCAAAGCCAATGAATAAACCCCAACACCCACAAAAACCCAAAACAAAAAACCTTAATCAACCTAACTGATTATTAACCACCTTCTAATCATTTTT # Right flank : CTGATTTATTGGCTTTTTTAGGGTTTTTAAGTTTTACTCTACTGCCTGTTTTGTTTATCATTAGCACACACTATTCCACCATTCTGTGCTCTCACATCCCTGTGCTGATGATGCAATGAAGCCCCCTAATGGTTGTGCTAATTGAAAGAAATGAAGAATGACAATGAAACTGTGCCGATGACAATATATAGAATATATATTTAACTCAATGAAAGAAGATAAGAATCATAAACAAGAATAAAATTCACATACATTTGCAGGGAAATTATAAAAGGAATTGGGGAGTTTAAGGGATGGGGGATGATGTCATTTGTTCAGGTATTGTGCTGGCTTCAACTGTGGATTTCTCCACTAGCCTATACACATATACTGTGCTTGAAATGTTTCCGTAAACGCTCATTAGGGAGTTGACTAATTTATTAGATAATTCTATTGCAAGTATGGGTGATGTATCCCTTACACATGACTTAAACCTACCACTCAGTACTACATTGCCTTCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTAATCCCTTTTGGGATTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 1258730-1259356 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =============================================== ================== 1258730 25 100.0 45 ......................... TATGGAACACATGTATAGATAGAGACCTAGAAACCTACACGAGTT 1258800 25 100.0 40 ......................... TATCCGTTTAGTGTTCCCCTTGCTTCCACGTGGAGGATTC 1258865 25 100.0 43 ......................... TTCCCACTTCCTTAATGTACTCATAATTTTTTAATTATTTTTT 1258933 25 100.0 47 ......................... TTCTAAATAATTTAATGAATCCTGACACAAGTGACTTAATGATTCCT 1259005 25 100.0 40 ......................... TCAAAATTGAGCGCACTAAAGATGGCGGTAGGTAATTAAG 1259070 25 100.0 39 ......................... CAATATTATCATGGTTTATGCATAAAGTTACAGGTTCTA 1259134 25 100.0 43 ......................... GTAATTATATATATCACTTAACGTTACTTCGTTAAACGCGTAG 1259202 25 100.0 40 ......................... CTGATGTATCCATATTTCTGCAGAATAGAGTCCGGTATTT 1259267 25 100.0 40 ......................... TTTCCTTGATTATTGACTTGACTACTTTCTCTGTTTCCCC 1259332 25 88.0 0 ......T....G....G........ | ========== ====== ====== ====== ========================= =============================================== ================== 10 25 98.8 42 GAAAATCCCAAAAGGGATTAGAAAG # Left flank : ATACTGCTCAAGGGCATTTGGATCAATTATTAACGTATCCTGAATCTCCGAGTAAGCCATAATGTAACTCTCCACAGAACCTGAAGATGCTACAACACACTTAATACCCAACTTAGTACAGGCATCAAATACACAATCCACCGATGAACCCCAAGTACTTAGCCTCTTTAGGAAGCATTCCCCAAGTTCATTATACACGGAGTTTTCTTGAGACATCCCACAACCACCTGGGGAACACGGGGGTTGTGTTGGTTTGTGGTTTTATTCTTGTTTGTGATTCCTGTCTTCTTTCATTGAGTCAAATATATATTCTATATATTGTCATTGGCACAGTTTCATTGTCATTCTTCATTTCTTTCAATTAGCACAACCATTAGGGGGCTTCATTACACCATCAGCACAGGAATGTGAGTGCACAGAATGGTGGAATGGTTGTGCCAATGATAAACAAAACAGGCAGTAGAGAAAAACTTAAAAACCCTAAAAAAGCCAATGTATTA # Right flank : GGTAAGGAATAGAAGGTGTGAAAATGCTTAAAAATGATCCTTAAAGGGGATTAATTCTAGGGTGTCTGCTATTGATTTTAAACTAGGTTCAAGGTATGATCCATTGAAGGTTGAGGAGGTGGTGTTGAAGTTCTGGGATGAAGCTAAGATACCTGAGAAGTGGAGGAGTTTTAAGGGGGAGGGGTTATTCACTTTCCTTGAGGGTCCGCCGACAACTAATGGTTTCCCTCATGTTGGTCATGTTAGGGGTAGGACGTATAAGGATATTGTGTTAAGGTATATGAGGCTTAAAGGTTACTCGCTTTGGGTTCAGGGTGGTTGGGATGAGCAGGGGTTACCTGTTGAGATTGAGGTTGAGAGGAGGCTTGGGGTTAAGACTAAGAAGGATATTTTCGATAAGATAGGGGCTGAGCGATTCTCGGAGGAGTGTAATTCACTTGTGGATTATTACCTTAAGTACTGGGTTGAGGATGGTACGAAGAGGCTTGGGCTTTGGCTTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAAATCCCAAAAGGGATTAGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 5 1583088-1583382 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================== ================== 1583088 25 100.0 40 ......................... ATGAAAAAGCCATAATTGTTACAGGGAAAAAGGAAAATAA 1583153 25 100.0 46 ......................... GGATGCATTCCCCTACTCCATAACAACCGTGAGGGGTTTGATTAAT 1583224 25 96.0 43 .............C........... TTAATTATTAAGTCTTTATCCTTAATTTTTTAATTCGAATTCC 1583292 25 96.0 41 .............C........... TGGATTGATTTAAGCGGTAACGGTTACAATGCAGTATTCGT 1583358 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================== ================== 5 25 98.4 43 CTTTCTAATCCCTTTTGGGATTTTC # Left flank : CTGAGGCATTAGGTTAACCGGGTATGTTAAATTAACCACCCACTCAACACCACCCCTTAACCCACTCACTGAAGTAGACTTAAGCAATATTGGGTACTGCATTGAGGTCGCATTAGCAATAATTAATGTTAACCTCAAACCAGCCACACCAAGCCATGGAGCCGTAACATTCTCCTCATTAATCAATATGCCGTAGGCTAATGGGTGAGTTAACTTCAGTGAATCAATGTAGCTTAATGGCGGTTCACCGTGGGTTAGATTCATTGAAATAATGTAAACCTTACTAACATACACAACGGGCAATGGCGATGATGGAACATAAACCGCTAACGTAACTACCGCTAACACTAATAATAAGGTAATGGTAATCAGTATCACTAAGTTACCTGACTCCATAATTATGGAGTATTAATTCAGTTAAAAACTTTATTCAAACCCAGCACCAATATTAAAGCTTTACAACACCATGCAGGCTTAACACTATTAAAGCAACATGCGTA # Right flank : CTGAGCTATCAGCTTTTTTAGGTTTTTTAAGTTTTTCTTCATGGTTTGCTTTGTTTATCATTGGCACAACCATTCCGCTATTCCTCACTCCCACATCCCTGTGCTGATGATGCAATGAAGCCCTCTAATGGTTGTGCCAATTGAAAGAAATGAAGAATGATAATGAAACTGTGCCGATGAAAAAATATAGAGTATATATTTGACTCAATGAAAGAAGACAGGAATCACAAACAAGAATAAAACCACAAACCAACACAACCCCCGTCAACCCCCGTGTTCCCCAGGTGGTTGTGGGATTTCATAAGGAGTTCCACTGAGGCTGGTTCATATATTGAGACTAGGGGTATTTCTAATCCCTCTTGGGATTTTCTAAACTATTGGTTTTAAGATTTTTAAGTTTTTCTCTATTAGTTGTTCACAAGGGTAGGCATCAATTAGCTCAGGTTGTGGCGTATGCGTTGGCTGTTGAGGAGACGCTTAAGGTTACTGTTGATGAGGCG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTAATCCCTTTTGGGATTTTC # Alternate repeat : CTTTCTAATCCCTCTTGGGATTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 6 1588509-1589276 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================== ================== 1588509 25 100.0 43 ......................... CCGCAGACGTTGCTCAGCTTGTTTAACAGTTTAGCGAAGCCGC 1588577 25 100.0 42 ......................... GATAAGGCCACGGTTTCAAGTACATTGAGGAATCGTTACAAT 1588644 25 100.0 42 ......................... TGTATGATAATTCCACCTTAGTGCTAGTTCCCCATGAACCTA 1588711 25 100.0 39 ......................... GGCGTATAATTGAGTACCGTTACTGAACATGAACTTGAG 1588775 25 100.0 39 ......................... TGTAGTAACGTGGAAATAAAGGTACACTTGTAGCAGGTA C [1588781] 1588840 25 100.0 40 ......................... TTGTGGTCGTAGAAGTCGAAACCTAACCCTATTAAGTCTC 1588905 25 96.0 46 ...........G............. TTTACAAAATCCTCAAATCCCTCAAATTTTTCCATAGGGAATCAAG 1588976 25 96.0 43 ...........G............. TAATTACAGCTGTGAACTCAGGAAACATAAAATATATATCACT 1589044 25 96.0 43 ...........G............. GCTTATGATGATTGCCGTTGATGGTAAGACATAATTAATCACT 1589112 25 96.0 46 ...........G............. TTATCACTACTCCAATGCAATGAACCCAGCAAGTCTTCATACTCAT 1589183 25 96.0 44 ...........G............. ATAACTTATGCTAGGTATTTCAATTACCCAATGGTCATGCCTAT 1589252 25 88.0 0 .T.............A.......G. | ========== ====== ====== ====== ========================= ============================================== ================== 12 25 97.3 43 GAAAATCCCAAAAGGGATTAGAAAG # Left flank : AGTGATGGGAGATTAGGGATTGAGACCTCCCAAGAGCCTTAGTAATCTCCTGAACAGAGGATGAACCATGATTAAGGAGAAAAAGCACAATCTCAAGCCTACTCCTATCTGATAATGCGGTAAAGAACATCTCCAACGCCATCAACAACGGCTCCCTCCCACTCATTAAACCATGAGAACCTTAGCATTTAATAAATCTTTCGCACCGCCACACACAACACCCAACGAAGACCTACAGTAATCTAAAAGCAGTACAAAACATATTCCTCCTTCTAATCCCTTTAGAATCTCAATAAAATTAAATATATACTCTATATATTATCATCGGCACAGTTTCATTATCATTCTTCATTTCTTTCAATTAGCACAACCATTGGGGGGCTTCATTACACCATCAGCACAGGAATGTGAGAGCACAGAATAACAGAATGGTTGTGCCAATGATAAACAAAGCAAACCATGAAGAAAAACTTAAAAAACCTAAAAAAGCTGATAACACA # Right flank : GGTATTAAATCGGCTAGGATGTTGGTTTATGATTGTAGTGTGTTTATTAGTTTCTGGATCCATTCTCTGGGTTTTATGATGCCTTCTTCGTTAGTTACTAGACCTCTTTCTATTAGGTCGTTTACGTCTATTCCCATTTGCTTTAAGATGTTTTGCAGTGTTCCGTTGCCTATTATTTTTAATGCCTCTATGTATTTTTCCTGTATTGTTAGTGGTAGTTTCGGTAATTCCACTATGCTTTTGAATGATTCATGCATGTAGATTATTTTCCAAGCACCGGTTAATTGGGCTACTAGGGCTATATACGCTGTTTCTGGTTTATAGCCTGCTGTGGCATTGACTACTACCTTGTACCCACTACGTGTTTTGTTTATTATTAGTCTGGCGAATTTATTCACTAGTTCTATTAATCCTTCGTTAAACCAGTTTATGTCTCTTCCAAGATCCTTTACGACTATTGGTTCATCAACCTTAGGTTTAATGTTGATTCCAGCCTTCTG # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAAATCCCAAAAGGGATTAGAAAG # Alternate repeat : GAAAATCCCAAGAGGGATTAGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 7 1611612-1612094 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =============================================== ================== 1611612 25 100.0 42 ......................... TATTGCATAATCAAGCAATTTAGCATAACCCCATCCGCTTAC 1611679 25 100.0 47 ......................... ATATTGGTATCATTGAGTTCACCAATACGTTTTATAACAAGTGACCT 1611751 25 100.0 44 ......................... GTCAGGTGGGTTGATAACCAATTCAAGCCCATAGATATACTTGA 1611820 25 100.0 44 ......................... TGTTTCCGAAGGCGTTGCTCCACGTTAGGTACCCGTTGATAATC 1611889 25 96.0 40 .T....................... CATGTAGGGGATAGATCCCTATGCACCCCGATTATATCAA 1611954 25 96.0 43 .T....................... TGCATTATGAGGGCGTCCGCTATTAAACCGTGGCCTGGGGTTA 1612022 25 100.0 24 ......................... GCATGGGGTGTAGCTGATATATCA Deletion [1612071] 1612071 24 76.0 0 ..G....T.....-.......GTG. | ========== ====== ====== ====== ========================= =============================================== ================== 8 25 96.0 41 GAAAATCCCAAAAGGGATTAGAAAG # Left flank : GTGCTTCCTAGCCCTATGGTCTATGTTTATCCCATTTCCGCTCAGTGCCCTTGTTATTAATGCATTTAGGAATAACCCATGCCACTTAGCAAACAACACAGGAGACTCTGGGATGAATCCCACAGTCACCTTGTAAAGCTTAACCACATACATTAATCAAACCCCTAATAATAAGCGTTCTCAATCATGGATAAGCTAAGCCTTAATAGAAACAGGCATTGCAATCGAATATATTCACAGTGGTTGTGTTGGTTTGTGGTTTTATTCTTGTTTGTGATTCCTGTCTTCTTTCATTGAGTCAAATATATACTCTATATATTATCATCGGCACAGTTTCATTATCATTCTTCATTTCTTTCAATTAGCACAACCATTAGGGGGCTTCATTACATCATCAGCACAGGAATGTGAGAGCACAGAATAGCAGAATGGTTGTGCTAATGATAAACAAAACAGGCAGTAGAGTAAAACTTAAAAACCCTAAAAAAGCTGATAACTCA # Right flank : GTTAGTTTACTTCTTATTAGGGTGCTTGAGAGTTTTACTCCGTAGCCGTCCTTAATTATTGGTATTGATATGATTACTAGTGGGTTTAAGCCGTTCTTGATCCTAATGTTATTTATCTCGAATGCCCTGGGTAGTGTTTCTAGGCTGACAACTATACCGTCTATGCTGTTGTCTGATACTGCAGGGCCGTATGGGTCGCTTATCTTTGATATGATTACCTTATCCTTATCAGTCTGTAGTTCTCTTGTTAACATTGTTAATAGTGCTTTAACCCTTTCTTCAAATGGCTTAACCTTATAGGACTTATACGATTGGGCGAATTCATCGCTGGTGACGCCGATGAGTATTCTTTCACCGTACTTAACAGCTGTGTAGAGTATCATAATGTGTCCACTGTGTATTGTGTCGAATGTACCACCCAGTGCGATCTTATGGAGCCTTAACATAATTCTCTAAATTCAATACGCCGCCTCGGTAATATTAACTTTATGCGTATTCAT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAAATCCCAAAAGGGATTAGAAAG # Alternate repeat : GTAAATCCCAAAAGGGATTAGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 8 1700150-1700374 **** Predicted by CRISPRDetect 2.4 *** >NC_009954.1 Caldivirga maquilingensis IC-167, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =========================================== ================== 1700150 25 100.0 41 ......................... CATTCCCCTACTCCATAACAACCGTGAGGGGTTTGATTAAT 1700216 25 100.0 43 ......................... TTAATTATTAAGTCTTTATCCTTAATTTTTTAATTCGAATTCC 1700284 25 100.0 41 ......................... TGGATTGATTTAAGCGGTAACGGTTACAATGCAGTATTCGT 1700350 25 96.0 0 .............T........... | ========== ====== ====== ====== ========================= =========================================== ================== 4 25 99.0 42 CTTTCTAATCCCTCTTGGGATTTTC # Left flank : CCTACCACCAGTCAATAACCTGGACCTCCTAATATACCCAATCACCCTACCCTCGTCAACAATGGGTAGGGTATCGAGGTTAAGCCTCCTTAACTCAGCCATAGCCTCCTCACTGCTCATTAATGGATTCAGTGAAAATGGGATTACTGGGTATGGTGAAGCATCCTTAACAGCCTTAACGGCGTTAACCTCATCGTTAATAGTCATGTTCCTGTGAATAACACCTACACCACCCAGCCTGGCTAGGGCTATGGCTAATGCATCCTCCGTCACAGTATCCATTGGTGATGAAACCAATGGTATGTTTATTGAAACACTTCTAGACACCTTGGTCGATGTATCAATGCTTATTGGATCCAGGGTAGCCTTACCTGGCAATAGAACTACGTCATTAAATGTTACCGCTAATCCCTTGATAGGAATCTTCTCCCTAAACATTATCCCCCATCCATAGTACCCCTTATAAACATATTGAGTTACTTCACATTCTAATCCCATTT # Right flank : CTGAGCTATCAGCTTTTTTAGGTTTTTTAAGTTTTTCTTCATGGTTTGCTTTGTTTATCATTGGCACAACCATTCCGCTATTCCTCACCCCCACATTCCTGTGCTGATGGTGGAATGAAGCCCCCTAATGGTTGTGCTAATTGAAAGAAATGAAGAATGATAATGAAACTGTGCCGATGGTAATATATAGAATATATATTTGACTCAATGAAGGGAGATAAGAACCATGAATAAGGATGAACGCTGTAATAGCATAGGATTTAGGCTTGAATTTACTCGCTCATTAATCTTCTTAGTTCATTTGGAATCTGAATACCCCATTCTTCAAAGGCTGAATATACGCTTATATACCTTGGATCGCTGGAGCCGTATTTCTTCCTCAATTCCTCAATGTAATTGGGATTCACCATTCTTTTAGCGTAGCCGATGTTATAGTCTGGGTGGAGTCTGGGTAAGTTATCCCAAGTCCACTTGGCGGTGATTGGGAATTTATCCAGTAT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTAATCCCTCTTGGGATTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //