Array 1 45514-44818 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHS010000003.1 Anaerocolumna cellulosilytica strain DSM 100423 Ga0415251_03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 45513 32 100.0 37 ................................ AAAATATTCACAGCAGTGAATTAACAGGAACACTAAC 45444 32 100.0 34 ................................ TTTGACTGGGTCTATCCATTTTTTAGGTGCTTTT 45378 32 100.0 35 ................................ ATCTATCGCACAAAGTACAGTAATATGCTTTAATA 45311 32 100.0 36 ................................ CCACTGCCTTTTACATCACTGTAGATATAAAGACCC 45243 32 100.0 33 ................................ CCGTTTACGCAGTTAACTAAATAAACATGAGCA 45178 32 100.0 33 ................................ GGTCAAGGGTACTGTTGATACTATATCTGTTGC 45113 32 100.0 34 ................................ AACCGCAATAAGAGAAATAGACTGGCAATTAGTT 45047 32 100.0 34 ................................ ATGGCAACACCTAGGTTATCCATCATGGTAAAAT 44981 32 100.0 33 ................................ GCATTTTTAGGGAGGTTAGTCGTGCGGATGAGC 44916 32 100.0 36 ................................ TTATTTATGCAAGGAGTATAAACTATCCCCTGATAC 44848 31 81.2 0 T....................AA.-...TC.. | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 98.3 35 GTCGCTCCTTACACAGGAGCGTGGATTGAAAT # Left flank : TGGATAATGCTTGTACTCATTACATATGATGTAAATACGGAAAGTGAAGGCGGGAAAAAGCGCTTACGGAAAGTTGCAAAACAATGTGTTAATTACGGACATCGGGTTCAAAATTCTGTATTTGAATGTATGCTGGATACAACACAATTGAGGCAATTACGTGGAATTTTAGAAGGTATCATTGATGTTGAAAAGGATAGCCTAAGGTACTATTTGCTTGGGAAAAATTATAAAGATAAGGTGATTCATGTTGGAGTGAAAGAAAGTTTGAACTTAGATGCGCCATTAATTCTTTGATGCATAATTCATTCCTACATGTGGAATCAACAAGGTGCGAATGTGAAGTGAACATGAAATCACTGGGAGATTCGCACTGAAAATTAGTGTTGTTTAATACTATTATATGATTTGATATTATGAGTTCCGAATGATATAGTATAGAAATTAGCAACTTGTACAAATATTTATTTCTTATAATAGATTTTTACTACATTTTTGCT # Right flank : TAGCCTTATTTTGATGATATGGCTACTTCTAAAGGATATCCGTTCCGATGATGTAGGGAAGGAAAATGCAAGAGTATCAAAGTCACTTGGTGAAGCACTGAAGGAAAACGGCATTTCGTATCCAAGCACTTCAAATCTTCTGGCTCTCACAAATCTCTATACGGTATCTTGGCAGAAGAGTTATTGAGGGAAGCTCAAGATTAGAATGTCAGCCATTTACTTTTGGAGCAGCCATGGAATACTGTAGCTCCTTAAAGAAGACCTCTAGGCCGTTTCCATACTCTTTTGTGTCTGCTATATAATTGTGGTAAAAGTCGTGAAGTCACTCCAATAGTCGGTCCACAGAAAACTTGTCTTGTCCTCTTCGCGGAATTGAGTGTATGCAGGTGAAAGAAAACCCAATATTCCAATACATTAATTTGCTTTGCTACACGTATTTGTGTATAGTGGTAAAACATTTAAGCGAAGGGGCAGGTTTGTAAATCAATGGGTGTAAATTT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACACAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 55999-54441 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHS010000003.1 Anaerocolumna cellulosilytica strain DSM 100423 Ga0415251_03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 55998 32 100.0 34 ................................ GCAGACGCAAATGGATTCCGGTAATGTTTTTTTT 55932 32 100.0 35 ................................ AATTGGTGATGCCCTTAACAATTGGTTTTCTGGCA 55865 32 100.0 33 ................................ ATTTGCCAATGGTGCGTTGAAATACGACAGCAA 55800 32 100.0 34 ................................ TCTAATAAACAAATTTAAATCCGCCAACATAAAT 55734 32 100.0 36 ................................ AATATTAGGCAAACCACTAAGGATAGAATCAACAAC 55666 32 100.0 34 ................................ ATCAGTATGCACAAAACTATACATCCCACGATAT 55600 32 100.0 35 ................................ AACTAAATCAAATATTGAAACAACAGATACTACTG 55533 32 100.0 34 ................................ ATGTTATAAAGAGATATAAAAATTACAGTGGAAA 55467 32 100.0 34 ................................ CGTAAAGTCTATATCCAATCCACCGTTTAACTCT 55401 32 100.0 34 ................................ TGAAATAAAATAAGCAAGCTATAAGCTTGCAAAA 55335 32 100.0 34 ................................ TCCATTATCAGGATTAATGTCCAAACAATGCAAG 55269 32 100.0 36 ................................ CCAATAGTCAGCATTGTAATTTACAGGCAGAGCTGT 55201 32 100.0 34 ................................ TATTTTGGTATAAATTTCACCGGCTGATTTATTT 55135 32 100.0 33 ................................ GTCTATTTCAACTTCTATTACTTGATTTTTAGC 55070 32 100.0 35 ................................ CACTTAGTCCTTCTGAAAAGGTGCAAATTGCATAA 55003 32 100.0 35 ................................ ATTTAATCCTCCACCGATATTTACTTGCCACCCCG 54936 32 100.0 33 ................................ CATATGTTAAAACCATACCAGAAGCGGTGCCAA 54871 32 100.0 35 ................................ TCCAAGAGCTAACCGCAGAAAATGATCGCAGACTT 54804 32 100.0 35 ................................ GTACTTTTACGATTGATATTAAACCAGGTTATAAA 54737 32 100.0 36 ................................ TAGATTTTAACAGTATTTCGTTTAAAAAAATAGGCC 54669 32 100.0 34 ................................ CACAATCTATTGGCAGTTAAACTTGTCAAATAAA 54603 32 100.0 33 ................................ TATAATGAATATTTGCATGTTATAACCGGCACT 54538 32 100.0 34 ................................ CTTGCTTGAATACTTAGACTTGTCCCGATAAAAC 54472 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 24 32 100.0 34 GTCGCTCCTTACATAGGAGCGTGGATTGAAAT # Left flank : TTTCCTGTTGATTGTGAGGAAGCATTAATTTTGTGAGCGAGCTTCTGCAAATTAAAGACTTAGCAATGAGGGGGAATGAACATGGGGTATGATGAATTGATACATCGCAGATATTGAGTAATAAAGTGATTTAACAGGATAAAAAGTACGTATATTAGAAGCGGACGGGGTAGCCCTCCCACAGCTGTAAATTATCTACCACAGCATATTTTATTGAATACCAAAGAAGGTTTTGATACAATAAAGGATTGTAAGATGTTTTAGAAATTCATATGAAGAAAAAGAGAAGGAATGCTTTCAATTCCTTGTTTCGAGTAAATGCAATTAATGGTGCGAATGTGAAGTGAACATGAATTCATTGGGACATTCGCACCTGTATTCTGGTACTATTTATAACTATTATTGAATTTGACTTTATTGCTGTCTGGTGCTATAGTATAAAAATCAGTATATTGCATAAATGTTTTCATTTATAAAGATATTTTCTAAGCATTTTTGCT # Right flank : TACACAAGGGATAATAAACAAATGTCCTTATTAACAACAATAAGATGTGACAGAGCCAAAGATTATATGAAAACTACTTCGACTTTCAATAATTAGGACCTTCGTTTAAATAATGGAGGTGCTTTTTATTTGTTGTAAAAAATATTTGCGTTAAAAAACATTCAATTCCTTTTATCTCATAATAATTGGGTAGTAATTAAAACAAAAAATAAATGAAATAATTATGGACATGTGTTCATAATTTGTACTATAATATCCATAAATCTACAAATTATTACCATATGTGGAATTGAAAATATCTGATATTATCTTACGTACGTGAAGGAAGGAGAAGGAATGGAGAGTGAAAGAATATATCCGGCACACTTTCGAATAGAGGATGAAACAATACAGTCTGTAGAAGAACATTTACAGGCAGTTAGTAATTTATGCGGAAAATATGCAGCAAAATTACAATTTGCAGAAACAGGAAGATTATTGGGTTTGCTGCATGATATAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACATAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 29085-21370 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHS010000019.1 Anaerocolumna cellulosilytica strain DSM 100423 Ga0415251_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 29084 30 100.0 35 .............................. GAAGAATCTGTGAGGGAATATATAGCAGAGGAAAA 29019 30 100.0 35 .............................. TTTACTGTTGTAGCGCCTGCTGAGTTATTAGCAGA 28954 30 100.0 36 .............................. AAGTTTGTATCTGATGGTATATCCGTTTCTAAATTG 28888 30 100.0 36 .............................. TCCCTTAAAATGATTTTTGGAAAGAAAGAAAAAATA 28822 30 100.0 35 .............................. AGTCTAGATTGGACAACCACCTGACAATTTAATTT 28757 30 100.0 36 .............................. TTTGCACAACCGCTACTCAATACCGGCTTCGATTGC 28691 30 100.0 35 .............................. TCCAATAATCCATATAATCTGAAACCGATATTTGG 28626 30 100.0 36 .............................. TACACAAGCAGATTGTTTCTTCCCCACAGCCTATAA 28560 30 100.0 35 .............................. GTAAATGGACAACTGATTTTGAATCTATGGCCAAG 28495 30 100.0 36 .............................. GGTTCTCGGTAAATCTGACTGCGGTTTTTTCAATTG 28429 30 100.0 37 .............................. AAGGCAGGAAAGATGTGGTTTGAGCGAATGAAATCAG 28362 30 100.0 36 .............................. GTGAAAAAATGACACTTGCCGAGGCTATGAGGTACA 28296 30 100.0 33 .............................. TGATGTTTCTAGATATAAATTCATGTTAGACGC 28233 30 100.0 36 .............................. ACTTATAGGATTAAGGGAGCACAGATTGATGTTTCA 28167 30 100.0 35 .............................. TTAAAAAATCACCTCACTTATTAAATGTCCGTTGT 28102 30 100.0 37 .............................. AATAAATTTATGTCTAATGCATGGTCTGGTACAAAAC 28035 30 100.0 35 .............................. TCACAAGACCGGCAGCATTACACCGACTAGCTAGA 27970 30 100.0 35 .............................. TTAGACAAAACAGAAGATGAGTTTTACAAACAGAA 27905 30 100.0 36 .............................. TCTTGACCTACTTTATATCTATTAAGCTTGGCTAAT 27839 30 100.0 34 .............................. GATGTTAAGCCCTACACCTAAAACTGCCATTACA 27775 30 100.0 35 .............................. TCTTACTGTTACATATTGTTCACCTTCTTTTATTA 27710 30 100.0 34 .............................. CGATAAGAATGAGGTCTAAAATTATTGCCATAAG 27646 30 100.0 36 .............................. GTTCCTGGCTATACGACTTATACAGCGGACAAGTGG 27580 30 100.0 37 .............................. AACAAATTTTATGCACGGATAGCAATTGTTGGATTAC 27513 30 100.0 36 .............................. AGAAAAGCGAGTGGGACACCTACATGGAAAAGCTTC 27447 30 100.0 36 .............................. ATTTACTATACTCATAATATGAGGGTAATGCCTACT 27381 30 100.0 35 .............................. GGGCATAGATGGAGACTATCGCCCGAACTTGCTAA 27316 30 100.0 36 .............................. CGCTTAAACTTTAGATAATGTCTCACTGCACTATCA 27250 30 100.0 35 .............................. ATTCTAGTTTTGATATCCGGTAATCGAGGTCGATA 27185 30 100.0 36 .............................. TTAAAAATCAGTTTATCATTCTTACATTTGATTTTT 27119 30 100.0 35 .............................. CAACTATGATGATAGAGGAACACATCTTCTCCAAT 27054 30 100.0 35 .............................. TAACATTAATACCCTCTGGAACGTTTTCTATACTC 26989 30 100.0 36 .............................. TTGATTAGCAAGTTCGGGCGATAGTCTCCATCTATG 26923 30 100.0 36 .............................. CGATTAAAAACATGTTCGATAGAAAGGAAACAGATG 26857 30 100.0 36 .............................. ATGTAAGCGTTTAAGTCTTTAGGTTCTGAAAAGCTA 26791 30 100.0 36 .............................. TGTCAAAACCTCTTTTCTTTATTTATTTTCTTTTAT 26725 30 100.0 36 .............................. TCTTTGACCATTTCAACATCGGCAATATATATTCCA 26659 30 100.0 37 .............................. AAAGCCTCATAACTTAAATTAGAACTTGATTGGCCTG 26592 30 100.0 37 .............................. ATGGTTTGGATTGCGCAGAAATCGTTTTGAAATTGAA 26525 30 100.0 36 .............................. TCCTCAGTTTGAGGCACTTTATTAACACTTGTAAGC 26459 30 100.0 36 .............................. TACCAGGAGGATATGCCTTTCAGCGAAGGTGGTGGA 26393 30 100.0 35 .............................. CCTTTCCCTATAATTTCGTAAATATCACCGAAACA 26328 30 100.0 36 .............................. CATCAAATAAGGCTAAGTCACCTGCAACACAGGAAA 26262 30 100.0 35 .............................. TGTATCGCTACAAAAAAGGGCGTATTCATTAGGAT 26197 30 100.0 36 .............................. TGTGATTTCCTCTCTTTATTTACATTATTTGTTGCT 26131 30 100.0 36 .............................. TCGCAAACAAAGCAGTATCAAATCTATACGGATACT 26065 30 100.0 36 .............................. TCTGGATAAGTTGTGCTTGTAGTTGTTTGCAGTATT 25999 30 100.0 36 .............................. CTGTTGAAAAAGGTTGAGCCATTTTGAGCTTTTAAC 25933 30 100.0 36 .............................. CACAAGTGCCTGAACAGTAAGAGCAAGTGCGACCTT 25867 30 100.0 36 .............................. CAGCAACATCATGCGCGGAACGGTCATTAGCCATAG 25801 30 100.0 36 .............................. ATAATATTTGACAAATTACAATATTATGTGCTAAAA 25735 30 100.0 36 .............................. CGATAAGAATGAGGTCTAAAATTATTGCCATAAGCG 25669 30 100.0 36 .............................. GTGTATACAAGGAAAGCTTATAGTTACTGGGGTTTC 25603 30 100.0 37 .............................. ACAAGAATTACTGTCAAAAAGCTAGTGCTGCACTCCT 25536 30 100.0 36 .............................. CTATCAAGAGTGTCTCAAGTTCAAATGGGGAGAAAG 25470 30 100.0 35 .............................. AATAAATATAGCATAGGAGGACAAGCAATGATAGT 25405 30 100.0 35 .............................. TATCAATAGACAGCTGGTCAACTGATTTTTGTATC 25340 30 100.0 35 .............................. CGATAAGAATGAGGTCTAAAATTATTGCCATAAGA 25275 30 100.0 35 .............................. GATATCAAGTAATCACTTATTTTCCTATCTATATA 25210 30 100.0 35 .............................. AAATTCAAGCCGTGAAAGCAAAATAAGGAAGTTTG 25145 30 100.0 35 .............................. GCTAAGAACGGCGGTCAAGATACTTTATACGGCAG 25080 30 100.0 36 .............................. CTCGAATATGCTTACAGAACTTAATATCAAGGATGA 25014 30 100.0 34 .............................. ACTATTGCTTCGGCTTCGTTTCTAGCCTGTTCCG 24950 30 100.0 35 .............................. ATATTTGGGATGGCTCAAAATTAAGTCCTGAATTA 24885 30 100.0 36 .............................. CTTAACTGGATTACCTTAAACTTATTATCCCTTGTT 24819 30 100.0 36 .............................. GTCAATTACAAAGCAATTTTATCATAAAGATATCGG 24753 30 100.0 35 .............................. AAATGCGAATATGGCTATGAATCAGAACAAGTTTT 24688 30 100.0 36 .............................. GGCAAAATCCAATGGATTAACAGTCGCAAAAATCTT 24622 30 100.0 35 .............................. AGGTATGCATTGAGTAAGACATATATGTTCAATGG 24557 30 100.0 35 .............................. CAAGTTGTATCTTATGGCAATAATTTTAGACCTCA 24492 30 100.0 36 .............................. ATGTTTAGGCACATCTAAGTATGTGCTGTGTACCAC 24426 30 100.0 34 .............................. GCTGAAAATGGTGGTCTAAATGCTGTAAGGCGAG 24362 30 100.0 36 .............................. CAAAGAAAATACTTATTACATCATAAACACCGATGA 24296 30 100.0 36 .............................. GACAAGAATAACCACAACATAGATGCAATAAGATAC 24230 30 100.0 35 .............................. ACCAGAACCGGTAAATCTACATTGTGCATTTTCTT 24165 30 100.0 36 .............................. TGGTCCCGAATGGTATCATGCTAAGTTTACAGGGAT 24099 30 100.0 36 .............................. AAAATACCACATATTGGTATTATGTGATACTGTTTA 24033 30 100.0 36 .............................. TTCTATTGATGATATTGATTATATTTTTACAGAGTC 23967 30 100.0 36 .............................. ATCGAAACAAGTTCAAGCTATTTCCGTATGGATGCA 23901 30 100.0 36 .............................. ATTGAATACATAACAGATGTATTAGTTAAATCATTA 23835 30 100.0 35 .............................. AGGGCTAGAGACCCTAACAGAGATAAAGCATATGA 23770 30 100.0 37 .............................. GTCCTTCCTGCTAAGGATTGTCTGTAAATCGGTTATA 23703 30 100.0 36 .............................. TGAAACAGGACGAGCAGAAGAAGTTTTTGATTGAAA 23637 30 100.0 36 .............................. TTCAGAGGCGTATAAACAGGGCATAGCAAGCAACCA 23571 30 100.0 36 .............................. TTTGCTGAATTGGATAAAGATTACTCGCCATTGAAG 23505 30 100.0 34 .............................. GAAGATATACCGTTTTGGGAGGAGGAAACGCATG 23441 30 100.0 36 .............................. ATTGTAGACTGGGGCGAAGCTTGGGAAACGGTTTTA 23375 30 100.0 36 .............................. TTGTTTGGTGATAAGAGAAGTAAAACACATTGGTTA 23309 30 100.0 36 .............................. TTGAATAATTCAGGTGACCTAGTAGGTGCCGCTCTG 23243 30 100.0 35 .............................. ACCCCTCCACCGTTGTGATATCCACTTTGTATAGT 23178 30 100.0 36 .............................. AAAAATACATAACAGACAACCCTTGTTATAAGCAGG 23112 30 100.0 36 .............................. ACTACTGGAAGTTCTTATGCTAAAAAAGGTGAGAAA 23046 30 100.0 36 .............................. ATGTATTCCCTCTTTTCTCCCAGCTCAACCTATAGA 22980 30 100.0 36 .............................. CAAGCAGTTGCCCGTTCTGTTCTATGATTAAGCATT 22914 30 100.0 35 .............................. ATGGTTAGTTTTGATAACGTGCAAATTCTTTCCAG 22849 30 96.7 36 ...................A.......... ACCTTTACCGGTGAAGCGGCAGACGCTTTTCTTGAA 22783 30 100.0 36 .............................. AAATAAAAAAGTGTTATGAGTGCGAATACTCCAACA 22717 30 100.0 37 .............................. TCTTTTGATTGAGATAATCGTTAATGTAGTTATGCAA 22650 30 100.0 36 .............................. ATATTGACAACCCGCTATATCAACACATGAAAAAAG 22584 30 100.0 36 .............................. GAACAAGTAAAGTGCAAATATTTAGAGCGCGTAGCC 22518 30 100.0 37 .............................. CTTATTATGCTGACGGCTGGAACGGTAATCAACATAG 22451 30 100.0 34 .............................. CCATTTCCGCAAAGTGTGACTGCCTTTCCATCGG 22387 30 100.0 35 .............................. TCCCTAACAAGGGTAATATGTAATACTGTTTCACC 22322 30 100.0 37 .............................. CTTATAAAATCCTCTATCCGGAACAACAGTTTTCTGG 22255 30 100.0 36 .............................. TCGTCTAGGGTGATAATTAATTGTTGCGAGATTGGG 22189 30 100.0 36 .............................. GTAGCCGTTACAAGCAAGTCAACAACCGTAGTTTCC 22123 30 100.0 36 .............................. CGAAACACAATAATTCTTCATATCTGATACCAAGCT 22057 30 100.0 36 .............................. TAAGGAGGTCTATAAGTATCAACCGTAGATGTAATA 21991 30 100.0 36 .............................. CTGTTAAAAAAGGTAGAGCCATTCTGTGCCTTAAGC 21925 30 100.0 36 .............................. ATCTATATTAGCAACCATATCTCCTATAGTGTTACC 21859 30 100.0 35 .............................. TACTAAAAAAGCCCTCTCCAATCCCCTGAAAAAGA 21794 30 100.0 36 .............................. AATATAACAGAATCTGTTAAGGCACCGTTTAGCATA 21728 30 100.0 35 .............................. CTACTACTGGGAATTTTGAACCACGAATTACCGAT 21663 30 100.0 36 .............................. GAGCCAATAGTATTTTTTTGCCTCTGCCAACTTATC 21597 30 100.0 35 .............................. CCAAATACGTTCACTTGATGTTACTGAACCGTTCA 21532 30 100.0 36 .............................. CGAAGTAAAACGGATAGCAAAAGCAGGGGACAGTAT 21466 30 100.0 36 .............................. ATATGCAATTATCGTAAATAATCAAACAAGTGATAA 21400 30 90.0 0 .........C..........T...A..... | A [21377] ========== ====== ====== ====== ============================== ===================================== ================== 118 30 99.9 36 GTTTTAATATAAACAGAATGGAATGTAAAT # Left flank : AAATTTGGTGGTGATATGTATGTGGTTCTTATATATGATATAGAAGTTGATGATAATGGTGCCAAAGCTTCACGTAACATATTTAAAATCTGTAAAAAGTATCTTACCCATGTCCAAAAATCTGTATTTGAAGGTGATATTACGCCAGCTCTATTACAGCAGTTGAAGTTAGAGTTAAATAAGCATATACGAGAAAACAGAGATTCAGTAATTATTTTTAAAAGTAGAGAAGAGAGATGGATGCAAAAAGAGTTCTGGGGGAAAGAGGATGATAAGACATCTAATTTCTTCTAAGCTGAATGGTAGTAGAGGTAAATTTATTAATTGTCGACCTGTCAAATTGCTTAAATCTAGGAGGCTCGACAGCTATAAGAAATGCTGTTATAATGTTATTTAGAAGTTATAGAAGATTGTATCGCTTAAATATCTGGATAAATTATTTAGAGGTAGACAGAAAATGTATGTATAAACCTCTTATAATGCCTATTTGAGTAATAAGG # Right flank : TTTCTATGCTGAGAATTATAAAGTATTACCCCCCGTGTAAGGGGGCATGGTTGTTTCTTTATATGTGTTTCTTATTCTTTTAGTTTATCTATAAAATCCGATATCACTGTGCGATTTTCTTTAGATAGACTCCAATAAGCGTTTAAAAATTGCTTAACAAATTTGTCATTACTTTTAACAATTTCATTTATAACTATGGATAATTCGTTATCAATTTCCAAGTGTTTCGTATACATTTCACCGTTACCAGTACGAAGCCAATCCTCATTTATTTGAAAGGTCGAACATATCATTTTAATATTTTGATCAGTTAGGGTATTTTTGCCTGTTTCAATCGAACTAATGGAGTTAGGTTTAAGTCCCAGCCTATCTCCAAATTTTTTTTGCGATAGGTTAAGGGATTTTCTAATTAACTTCACACGTTTTTCCATGTATAACACCTCCTTAGATAAAATTATCACTAAATGATATATTTGTCAATTAATGAAAGAATATATCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATATAAACAGAATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //