Array 1 182828-183757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBPD010000001.1 Enterobacter bugandensis strain IF2SW-F2 Enterobacter_cloacae, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 182828 28 100.0 32 ............................ CTTAATTGTATAGGGGGAGCTATGAAAACGTT 182888 28 100.0 32 ............................ TATAACTATCAATATACAAAATAAATGGTGCG 182948 28 100.0 32 ............................ TAAAAAGATAAGAGCAATGTTCGTCGATGAGG 183008 28 100.0 32 ............................ AGATACAACAATTATTTTAACAGATGATGGTA 183068 28 100.0 32 ............................ AGGCTCAATGGTTCCCTGCATGCTATCACCAC 183128 28 100.0 32 ............................ GTCAGACGCTCAATCGCAAGCTGCATTTTTGA 183188 28 96.4 32 A........................... GAAGTATGGGTCACGTTTAACCCGTATTTCGC 183248 28 100.0 32 ............................ TCTCGCACAAGGTCATTGAGTGGAGAGTGACC 183308 28 100.0 32 ............................ CTCAAAATAAAAACCCTGGGCTAAATGCTCCC 183368 28 100.0 33 ............................ CGCAGCGAAGCGAGGACTCAAAAAGCATTACGG 183429 28 100.0 33 ............................ CAGCTCGCGCCTTCATGCGCTTACGCGCATTCC 183490 28 100.0 32 ............................ AAAGCGACGCACCAAAACCGGCAGTAGTCACC 183550 28 100.0 32 ............................ TGATCTGGTGTGTGCTGATAGTGTGTTTCACA 183610 28 92.9 32 ............G.T............. GCCAGGAATGCGAGATTGCGGATATCAGTTGG 183670 28 92.9 32 A...........G............... AGGACAGGCCCATATCACAGGATTTCTCTGTT 183730 28 92.9 0 A......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCCCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCTTATCTGGAAGAAGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATTACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGAAGAAACGGTAATTCACATTATTTCCTAAGTGCAATCCAGGGCGTCGGGGGCGTTATTCTGACGCCATTGGTTTATACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATAGTGCGGATTTACGTTCCAGAAAAAAGGGTTTTAGGCGTAAAAGTTGATTATTTTATTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AGCCCCTTTGGGCTTTAATGCCGTGGAAATGGCGTTACTATCTCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTTGTCTATTTAAAAACGAAATACCATCATCCACACGCTATCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTTTAAAAATAATACTTTAAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 193311-194299 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBPD010000001.1 Enterobacter bugandensis strain IF2SW-F2 Enterobacter_cloacae, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 193311 28 100.0 32 ............................ AGCATTGCCGGGACTCTCAGCGTCGAATCCAG 193371 28 100.0 32 ............................ TAAGCCCTGGAAATCAATCTGTCCTCCTGTGT 193431 28 100.0 32 ............................ TTTTTGCTCATTGGTTTTTCAGCCTCAGTCTG 193491 28 100.0 32 ............................ GTGGGGCTCGAAGCTCTGGCTGCTCAGCCGTG 193551 28 100.0 32 ............................ AGCCTGATGGCAGCGCCGCAGCATGAAGTGAT 193611 28 100.0 32 ............................ ATATTGATACCATCCTCTGTGGTGGCGCTATT 193671 28 100.0 32 ............................ AAGAGGCCAGCTTCGTGAATCTGGCTTACGTA 193731 28 100.0 32 ............................ ATAACCCGAATGTGTGAGCGGAGCCCCTTTAC 193791 28 100.0 32 ............................ ACGGAGTACAGGTCAGCAACGTCAGCTGACGG 193851 28 96.4 32 ........T................... ATATTCTGCTAAATCAACCCCGGCTCAAACGT 193911 28 100.0 32 ............................ ATGAAGTCATTTACACACATTCAGCAGAAGGT 193971 28 100.0 32 ............................ TACGCGATTCATCGGGGTCAGGGAAATGACAA 194031 28 100.0 32 ............................ GAAGGGCGTAATACTCCAGGCCAAAACGATAG 194091 28 96.4 33 .G.......................... AGAGATTGAACAGCTGAGTGACAAGCGTCGATT 194152 28 100.0 32 ............................ TACATCACAGGACAATCATCAAACTCACCAGA 194212 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [194237] 194272 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 17 28 97.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCATTAATCCCTGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTGATTTTTAACGGTTTTGTAATCCATTGATTTTAAATGAGTATTTTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGATTAACCCGACCTTTTATATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTTCCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //