Array 1 1905597-1904801 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039734.2 Sulfurospirillum sp. ACSDCE chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 1905596 35 100.0 34 ................................... TGATTGATTTGTAATAAACCATTGTAATGTTTCT 1905527 35 100.0 37 ................................... AAGATAACATTGGAACTCCTTTTAATAATTTAATGAT 1905455 35 100.0 34 ................................... GTCAAAACAGCTAAAATAACTAGACGCATTTTCG 1905386 35 100.0 35 ................................... TGAGATTTTCTACCATCTTCTTTTACATTTACTTT 1905316 35 100.0 34 ................................... TAGAAGAATTTTTAGCTTAGGAAAAGGTTCATGA 1905247 35 100.0 33 ................................... TTTAATCATTTTATTTCCTTTTAATAAATTTTA 1905179 35 100.0 34 ................................... CCAACCATCAGAATCTTTTAAGTTTTCTGAATGA 1905110 35 100.0 33 ................................... ATCTCATCAAGCGTGCAATCCCAAGCATCACCA 1905042 35 100.0 34 ................................... ATAGTATTGTGGTTACTGTAACCCATAAATTCTG 1904973 35 100.0 34 ................................... ATTTCTTGTTCTTCAAAAAGAACATCAGCAGATT 1904904 35 100.0 34 ................................... GGATAAACCATAGCTTTTTCTACTTTTTGATTTG 1904835 35 85.7 0 ..............................TGCTT | ========== ====== ====== ====== =================================== ===================================== ================== 12 35 98.8 34 ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Left flank : ATGCAAGAGGAATGATTTTAGCACGTTATGAGAGGATACAGACAGTATGAAAAACTATCTTTTATGCTATGACATCAGCGATAAAAAACGCTTAGCCAAGCTTGCAAAACTTTTAGAAAAAGAGGCGTTTCGTATCCAAAACAGCATCTTTTTACTTTTAGAACCAACTTCTCATGAAGTGGACATTTTGGTACAAAAGATAGAACAATGCATCGACAAGGCACACGATGATGTCAGACTCTATACCATTAAATCAAATGGTTTTCATTTTGGTTCTGCAACCAATCTTGATGAACCGTTTCTTTTGATATAACTCTAAGAGAGAAAACTATACAATGCACTCTGTAAAGCAAGAAATGGTTAACGTGAAAGTTTCGTTTAAGAAATTATTGATGCAAAAAAGGGCGTTTGCAAGGCGTTTAACCTTAAAAAAGTGCCATTTTTCATCATGTAAGGTTTACCTAAGAAATGAAAGTGCGATAGTATCGGCATTCTCTGCT # Right flank : TCGAACCTAGAACATTTTAAAAATATAGTGAAATGTACGCCTGAAAAGCTCTATGCTATCTCAAGGTGCCCATTACTTCCACATCTTCTTGAAAAACTGCAAACTCTAGGTTTTATACTCTTTAAAAACTATCCTGATTCTGCTGATCAAAAGATTATAGATCTGATTACGTTGCAACACTTACTCCTCAATCCATAAATCTTTTTACATGTAAACATCTCAACTATCCAATTTCTCTCTATTTTTACCTCGCTTTTTGACAGTTTTTGTCTCACACTTACTCTACGATAGCACTCGACAAAAGGGAAAGAGTCTTTTGAAAGAGTGGTTTTTGTGGGCGATGACACGATTCAACATCAATAGAGTGCATGTAACTATGAGAAATCATACATGCATCATCAACAATAGTCTAAGGAATTGAAATGACATTTATACAACGCTTTTTAGTGGGTGGTGTGGCAATCGCTACTTTTTCATCACCTATCTTTGCAGAAGATTTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 1922408-1921962 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039734.2 Sulfurospirillum sp. ACSDCE chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 1922407 35 100.0 31 ................................... TTCAATTGGATCGTTGTACGATAGCATTTTG 1922341 35 100.0 33 ................................... TTTTTAAAATTTCTGCAGATCTTGCGTCTTTTG 1922273 35 100.0 34 ................................... GAGAGACCTTCCAAATTCTCCATTACCGCTTCAG 1922204 35 100.0 34 ................................... CTTAAAAAGATTGTTTTATTCTGCTGCTGATCCA 1922135 35 100.0 34 ................................... CATAAATGAAACAATCATTTATTCTCCTTGATAA 1922066 35 100.0 35 ................................... TACCAGAAGAAGAGAGATTGGCATAGAAAAAACCA 1921996 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =================================== ================== 7 35 100.0 34 ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Left flank : TATGGGCATTTTATTCCCAAATAGTAAAACACCTCTACTGAACTATATATAATATTGGCATTTTATTCCCACAAATAAATCTTATGACACTCTTATTTGCTATTATCTATAATTGAAAGAACATTTTTTCTTTACCAAAATAGAACTTTTTGGCTTTTATATCTTTTTTTGTGGTTATGCGGCAATGGTTTTTCTTTGATTCCTTCTTTACATGCAAAGGTGTTTATTTTCAACAAATAGTATTTTACATGACTTAAAAGTTGACAGTTTAACGCTAACTCTATATTTCAGTTATCTCCCATTTGAGAGAACTCTAAGATAGAAAAATATAAAATGGAGTATGTACAAGCATAAATCGATAAAACGTGAAAGTTTCGTTTAAGAAATCATTGATGCAAAAAAGGGCGTTTGTAAGGCGTTTAACCTTAAAAAAGTGCCATTTTTCATCATGTAAGGTTTACCTAAGAAATGAAAGTGCGATAGTATCGGCATTCTCTGCT # Right flank : TAATATGCAGTTGTATGCTCAACTTCTGTTACATTACATATTGACCCGATTTAACATCATCATTGCTTACATGTAAGAAACCATGGGAGGCAACTATCTTAAAAAATTTGCCGTATCTTTTCTCCTTTTTTACAAATAGCATACCTAACTAAGCAAGCTGTAATACTCTTTTTGGCTTAATACTTATTATCTTTATGGGGAGAGTTAAGTGTTACGTTTTATCAAAATCGACATCACTTTCTCCTCTTCTTTCACTACTTCATTAGACTTTCTTGGCTCAACTTTAAGGGGTGCTTTTGGTGTTGCACTAAAAGCGGTCTCTTGCCTCAATAAAACTCAGGAGTGCCAAGGGTGTTTTGCTACTCAAAACTGCCTTTATTATGATTTTTTTGAAATCAAAAATAGAGCGCATGCGTATCGCTTTTCGAAACCATTGCATGAAAACAATTACAATTTTTCTTTGTATCTTTTTGAGGCGGCATGTGAAAAACTTCCTTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 3 1929415-1929105 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039734.2 Sulfurospirillum sp. ACSDCE chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 1929414 35 100.0 33 ................................... CTGTGTGTATATCGATTTTCCTTCCTGTCTTTG 1929346 35 100.0 34 ................................... CTATTTCGCTCTAATTTAACCTCTTTAGTTTTTT 1929277 35 100.0 33 ................................... TCGATGAAATTGATTAATTCTCTAGATAGATAT 1929209 35 100.0 35 ................................... AAAAGCTAAACTTTTACTCTTACCGTCTTTTTTAA 1929139 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =================================== ================== 5 35 100.0 34 ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Left flank : ATAATAGCAAAGTTGTGTTTATTCCTACAGATCTTAAACATAGCCTTGAAGGAGCTACTGGAGGACTAGGGACGATTTTTTCACAAGTAAAGTAGACGCAATTTAGTAACTATTACATCGTTTTTTAGTTGTATTTCTACCTACGGCATTAAATCCATTATTTTGCGATAAAACTCGTAAGCCATTCTCTATAAGGGTACTTGGCATCACGCTTACGAGTTTCAATCTTAGCCATATTGGATGATACTTCTTAAGAGGTTATAAGACAATTCTTTGTTTCTGATTTTTTCTTTAACTTCTCTTTGAGAGAACTATAAGATAGAAAAATATAAAATGATGTATGTACAAGCAGAAATCGATAAAACGTGAAAGTTTCGTTTAAAAAATCATTGATGCAAAAAAGGGCGTTTGTAAGGCGTTTAACCTTAAAAAAGTGCCATTTTTCATCATGTAAGGTTTACCTAAGAAATGAAAGTGCGATAGTATCGGCATTCTCTGCT # Right flank : TTTTCGATGGTTTTTTCTAACAGTGGAAGATCTTAATTACATACTGACCCAATAATTTTTATGGATTTGCCATAAAAGTCTTCACAATAAATATATCCCAGTTTTTATTTACAAATTGACTATATTTGTCACTTCAATACTCTATTATTCCTTATTAAAACAAATAAAGGAAAAAAATGTTTAACGACTTTATAGTACACATTAACAATGCTCTTGGTGCATCGAATTCAAAAGTAATTGTTATAGCACTTGTCATATTTTTATATGTTTCTATTGGATGGTTTATCAATAGCTATGGAGAGAGACATTACCAGTACCCGGTTGTTTCTGAGAATTGGAATTACATTTTATTTCTAGCTGCGTGTATTGGCGTAGCAATATTTTTGGGAATATTAATCTCTTCAGGTACAGGGCTTCTTTCTGGTGAAGAGGTGATGAAATTAATTGTTTTTGGTATTTTGGTTGGATTTATTGCTTTGTATGTCAGAATATATAGAAAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //