Array 1 26360-27712 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPZ010000004.1 Anaerostipes hadrus strain MSK.22.35 NODE_4_length_145417_cov_334.457, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 26360 36 100.0 36 .................................... CCGCATCAGCGATCAGTGTTTTAATCATCTTTGCGG 26432 36 100.0 40 .................................... TGGTTTATAAACATTAAAATAAGTTAAATGTTTTTCTCCA 26508 36 100.0 36 .................................... GGGTTTATCATATATCATCATGCAAGACAAACTATT 26580 36 100.0 37 .................................... CTAAATCGTTATAGCGTTCTGCGATTTCATTCAATCT 26653 36 100.0 38 .................................... AATACTTTTTTAAATTTTTTTGATTTACTTTTTTGAGT 26727 36 100.0 36 .................................... GTAAAGGATCAATAAGTTCTCCTTGTTCATTCTCTT 26799 36 100.0 36 .................................... TTATAGTTGGTTTATGTAATTGTGTTTTATTTTCCA 26871 36 100.0 37 .................................... GGAGTTCCAATAATTCCAAAAATTTTATTAAGTGAGT 26944 36 100.0 35 .................................... GCGGTAGGGAACGCCTACTTTAGGAAAGATTTTTA 27015 36 100.0 37 .................................... CCACGCACTGGGCTTCTTATCATCTTCTTTCTTAAGT 27088 36 100.0 42 .................................... TCTTCTTCTGTGAAGTTATAGTTTTCATAAGCTGTTACAACA 27166 36 100.0 39 .................................... GCATTCATTGATTGCTTTTTTGTTTGACTTTTCGCAATT 27241 36 100.0 36 .................................... TGGTCCTGACTTTTTATAGTAGCTCGTCCCATACAA 27313 36 100.0 36 .................................... AGATACTTGATTTATATCTTGCATCCTTTTGACAGT 27385 36 100.0 37 .................................... CTTCGATCGGATCTTTAAATACAAAGCTTGTATATTT 27458 36 100.0 40 .................................... AAATCATGTAAATCGCTTCAAATACTTCCTTAGCGAATTC 27534 36 97.2 34 ..........................A......... GATCCATTGCATAAATAGTCAACAGCTTCTTTCT 27604 36 100.0 37 .................................... CCTAAATCTCCAGAAATATGTAATCTGCAATAATCTT 27677 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 19 36 99.9 37 ATTAAGAAAATAAAAGCCCCGATAGGGGACGAAAAC # Left flank : TTGACGAGAGTATCAATACGTATTATGATGAAACTATTCTGGATGCAATCAATCATTTTTTAGAAAGTTATTATCATTTTCTGAATGGATTTGGACCTGTTAATGAAGAACAGGATATTCTATATTTAGGCGGAGGAGCTGGTTTTGCAACGAAAACAATTCTTTATGGAATTTTCTCAAAGAAAGATGCCGTTCGTGTGATCAGTAAAATATTTGATAAAACTATTTTTAGGAAAAAGAATGAAAAACCGCAACATATAAATGATGTTCGTCTAGGTGTTTCACCTCATATTAAGAAGTGTACTGAGTATGCAGGACGTGAATATGAATTCGGTAAGTGCAAAGTTTATATAGAAGAAATATGATTTTGCCCCGATGACCTGTTTATGCGGTGTAGAGCCTTATTTTGAATAAGAAAAAGATAAAAATTTATCTCAAAATAAGTTTACACCGCAAAACATCTTTTTAACCCGCATAAATACAAGGATTGTAAGACCAGG # Right flank : CTAAAAATCATATATTTGATACTTACCTACTTTTCATTGTAATTCACTCAAGAGAACTCTAAAAAATTTTCATGATTAGTAGAGAAATAATCGTTCATTATTAAAAAATATGTTAAAATAACATATAGACACTCTGATAAGGGACGAAAAAAGAACAAATTTACTATAGTGTAGAAAAACCTTGAAGATAAAACACCCCGACAGGGGACAGGAGAATATAGCTTATTTTAGGAAAGGAGTGCCTATGTCATGTTTATATATTACTGAAAATGGATCTAAAGTCGCTGTAAAAGGTGGGCATTTTATTGTAGAATGTCAAGACGGATCAGAACGCCTTGTTCCGAAAGAAACGCTTGAATCAATCGTGATATTTGGAAATGTTTATTTGACAGTACCATGTATTAAGGAATGTCTGGAGCGAGGAATAGCAGTATCCATGTTTTCAACAAAAGGAAAATATTTTGGACGGATTGAATCAACAAATCATGTGAATGCAAAGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAGAAAATAAAAGCCCCGATAGGGGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 8117-5839 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPZ010000045.1 Anaerostipes hadrus strain MSK.22.35 NODE_45_length_9218_cov_219.488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 8116 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG TAA [8098] 8046 30 100.0 36 .............................. GTTGTTTGCTGCTTTGAACATTTCTTCTGATATAAT 7980 30 100.0 34 .............................. AAGATAGTCAATAAGTTCAAATGGATCAGAAGTA 7916 30 100.0 37 .............................. ACTAATGGGAAGACTGACTAGAAAGCCGGACATAAGT 7849 30 100.0 36 .............................. TCAATGTACGCCATGAAATCACTCCTTTTTATCCGT 7783 30 100.0 34 .............................. GGATCAATCGTTGCATATAAGGACTCTCATTAAG 7719 30 100.0 36 .............................. AGCTTTATAAGATTCAAGAGCTTCGATCACACATCT 7653 30 100.0 36 .............................. GCAGATAACCTTTTCAAATGAGGGTAATATAGCAAT 7587 30 100.0 35 .............................. CCTAAAGTGTATTTTAAAATTTCTCTATATTCTTC 7522 30 100.0 35 .............................. CTAATCACCTTTCCTTTTTACAAAATATTAAAATT 7457 30 100.0 36 .............................. CGAAGTAAAAGTAATTGATTGGGAAGCAGGAAAGCT 7391 30 100.0 37 .............................. TAGAAAGCTTAAACCAGTATGGAGAAAGGAAACAGAA 7324 30 100.0 35 .............................. GATTTTTGTATCGCAACATCTAACAATTATGTTTC 7259 30 100.0 37 .............................. AGATGAAGAAAAGGAGGAAAAATAAATGTCAGCAGCA 7192 30 100.0 35 .............................. GAGATTCAAAATGCTATCAATTCGTTAGCGTCTAC 7127 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 7059 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 6991 30 100.0 36 .............................. AAAAATAGCAGAAGAAGCAAAAAAACAGTGTATAGA 6925 30 100.0 36 .............................. AGAAGATAAGATTAATCATACGACAGAGTTAGACGA 6859 30 100.0 35 .............................. ATGATGATCGGGCGGAGTATCAATCTATCTGCGCT 6794 30 100.0 36 .............................. AATGAAAGAATTAGAAATGAAGGAGGACTTAAACGA 6728 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 6663 30 100.0 35 .............................. CGGATTAGCAGCCAGTATCGCATCTGTAATTATGA 6598 30 100.0 37 .............................. AAAAAAGGAGTAAACGTTGAGTGACTATATTTACATA 6531 30 100.0 36 .............................. TATGAGCGAGCTGATGAAGAAATACGGCTACGAGAA 6465 30 100.0 35 .............................. TTACTCATATCTTCTTTCAAGACATTTAAAACCAA 6400 30 100.0 35 .............................. CGAACGCTGTGATCGATTACGGACGAGAAAAAACA 6335 30 100.0 39 .............................. CTATCCTCATATTCACAGCCTTCATCAGCATAAGACTCT 6266 30 100.0 36 .............................. CTCTGATCACGAATTGGCGGTGCAAATACCTTGTAC 6200 30 100.0 36 .............................. ATATACGAAGTAAGCATCGGGAACGATGATAATTAT 6134 30 100.0 37 .............................. GATGGAAATGCAGCAGCTACAAGCTCAATGTCATTTA 6067 30 100.0 37 .............................. CTTCTGGAACAAAAAAACAAGTTGTAATCCCAACACT 6000 30 100.0 36 .............................. AGGAGCTTCAGGAGAAGTATGATCTTCTTGATGAAA 5934 30 100.0 36 .............................. CATACTTCACGTCTCTCCAAGCTTTCTGTAAGAAAC 5868 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 35 30 99.8 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCCAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATCGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTGAACAATTACTCAACTATTATTATACTTATTTTTAAATTCATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTTCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCATGGGTCGACAGAAACCCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACGGCTATTTTTAGGCTTATTTTCAAAAAAATAAAAATTAGGCACTTTTATGCAAAATGCCTAATTTTTATCATGCGTTTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //