Array 1 131090-130817 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKHQ01000008.1 Xenorhabdus sp. TS4 Xets_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 131089 29 100.0 32 ............................. GCCAGATTATGAGAGTACGACAGGTGCATAAA 131028 29 100.0 32 ............................. CTGTCGGCCGTCGCTTGGTCAAGATGCTCTTT 130967 29 100.0 32 ............................. ATTTACGGGCGCTGGCATTGGCTCCGAATGCG 130906 29 100.0 32 ............................. ACCTCATGTCTATTGGGGAGTTTGGAATATAA 130845 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGTTCCCCGTACTCACGGGGGTGTTCCG # Left flank : CCCTTAATTGAAGAAGTACTTGCGGCGGGCGAAATTTCCCCGCCACCCCCTCCTGCTGATGCACAACCTCCCGCCATTCCTGAACCGGTATCCATCGGTGACATTGGGCACAGGAGCCAGTAAAGATGAGTATGACGGTGGTCGTAACAGAAGCCGTTCCTCCTCGATTACGGGGACGTCTGGCTATTTGGTTACTGGAAATACGGGCAGGGGTTTATGTAGGTAATATCTCGCATAAAATCAGGGAGATGATTTGGCAACAAATCACGGAACTGACTGAGGATGGAAATGCCGTTATGGCATGGCAGACCAACACCGAATCTGGGTTTGATTTTCAAACCTTTGGTGAAAACCGAAGGGAACCGCTAGATTTTGATGGCCTGCGTTTAGTGAAATTTAAACCACTTTCTGAGGATCAGTTTGGGAAAGTTAAAGGCGATTAAAATGGTAAAGTTTTTTCTGTTGATAAAAGTTTTTTAGCACAATTGGTTATATTTAGT # Right flank : TTTTATAACGTGACCGGTGACCAGCAAGGATTGTGTTCCCCGTAAGCTCAATGAATAATTCCAATATGCCCCGCATAAAAAACATTAATATAACTATTGATTAAATAAGGTAATAGCAAACCAAAGATAAGATTATCCATTGTCGTTTAACAATGACTTATTGTGATAAGTCATATAAATAATAAATAAAATTAAAACATTTATAGACTATCCTCTTATTTTAAGTAACCGAAATAAAAATCAATATAAGAAATAATTTCAATATCAATTTATTATTTTTACTAACATCTTGGAGAGATAAAACTCGTTCTATTTGATGATAAAACAAACGAATATTCCAAATTGTGCAATATTACACCTACAAGCATAATTCGTTGATGATTGTCAAAAAGAGCTATGATAATCTACGCGCCTTTCCGTCTTAATTCGTTCATTTTATAGACAACCAAATATCAAAAATAGGAAGTGAATTCATTTATGAACTTAACTAACACTAGCAA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACTCACGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 46470-45891 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKHQ01000017.1 Xenorhabdus sp. TS4 Xets_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 46469 29 100.0 32 ............................. TAGACTTGAATGGAGACATTAACGTAACCACA 46408 29 100.0 33 ............................. GCTTGAGTTAGGCTTAACTCAAGCGGAGGCGGC 46346 29 100.0 32 ............................. AAAAAAGACAGCTCACCCAATACATTTGGGGT 46285 29 100.0 32 ............................. CCTGTTTACATGGAAACTCACATCTTCAATGT 46224 29 100.0 32 ............................. CCTGTTTACATGGAAACTCACATCTTCAATGT 46163 29 100.0 32 ............................. ATTCCAATGCTGATTTTGTAACCTATGTGCTC 46102 29 96.6 32 ..A.......................... TACCTCATATTCCTCGGATTTTGGGTAGCAGC 46041 29 100.0 32 ............................. CAGCTTGCCATTCACCCATCGAGGATTATTAT 45980 29 100.0 32 ............................. TGTAGTAACATCAATGCAGGATAGACAATCTA 45919 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 10 29 99.7 32 CTGTTCCCCGTGAGTACGGGGATAAACCG # Left flank : TATTCCAAATCAGAGGAGATGCACGATAAAGTGATAGGGACTTTCATCGAACGGGAATACTATTCTTTATAGGACAATCTAACCATTGGAGTCACGACCAACCGGCTGAGCGTATTGAGGTGGATATCAGCCATC # Right flank : CAATAGCGAGAGAGGTTCCCTTCTCTCATTTTACTGCTCCCCATACATACGGAAATAAATATAGTGTTTATCATATCACTTTGTTGCAGATAGAGGTGTTTATAGCCTGTGGAGAACTCAAGTCATGGAGGGCTTTTCAGTGTGATAGGAGCTTATGGTGATATATCAAACATCTTTTCTATTTAATCTTTGCAACTTATTGATAATCTGTATCGCTATAAAAATATCGTTGAGTCGTTGAGGTATAAGGGAATAGCGAGTTTCCAGCATGATGGGAGGGACATGTTATATCCTATTGAAAATAAGAAAGATAAAAAATGGTTGAAATCGTCCTATAGTAAACTATTTCCATCCGGTAAAATCCGGAGCAAAATAGGGCACGTTGTTATCATTCATAAAATAGTAATAAAAAATGACATATTGTCATTGTTTCAGCTTTCAATTTGGGCTTACTGCGTTTATGATGCGCGCTTCGTATTTTCAACCGGCGCCACTGGCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGTGAGTACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGTGAGTACGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2209-104 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKHQ01000100.1 Xenorhabdus sp. TS4 Xets_100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2208 29 100.0 32 ............................. TCATCGTGATCTTGCTTCTGGTTCTGCATGGG 2147 29 100.0 32 ............................. ATAGTATTCGTTATTATAGCCGGACTCATTGC 2086 29 100.0 32 ............................. CTCTTTTCTGCGCAATCTAATGCGCTCACCAA 2025 29 100.0 32 ............................. ATGATCAGTGCAATAACCTGAGCGGTCAATGG 1964 29 100.0 32 ............................. GCGGCTTTCAGTGCTTTTTTCATTGTGTCACT 1903 29 100.0 33 ............................. CCCAAGGCACACAGTGGGACGGATGCGCTATCC 1841 29 100.0 32 ............................. GCTTCCTCGGCGGCCTCAAGGTGGGCGGGTTC 1780 29 100.0 32 ............................. CAATAATTATGATGATGAAGTTTGCCTTCTCT 1719 29 100.0 32 ............................. GACTTCATCTTCTTTTTGCAGGCAAACATAAA 1658 29 100.0 32 ............................. GACTTCATCTTCTTTTTGCAGGCAAACATAAA 1597 29 100.0 32 ............................. GGATTATTTTTTATTTTTGTTACTTTTTCGGG 1536 29 100.0 32 ............................. CTCTTTCATATTGTTCCCTTCCACTATTATAT 1475 29 100.0 32 ............................. AATTATTTTCTTTATTATTTTCCTCTAAAATA 1414 29 100.0 32 ............................. GGATTTCCGTTTACTATTACTATGGGGTTGTT 1353 29 100.0 32 ............................. CTAAACCCACTTATGACACGGGCGATCTGATT 1292 29 100.0 32 ............................. CCATAGTAGCCCACCCGTTCACGGGATTGTTC 1231 29 100.0 32 ............................. ACGGTTATCAGAGTCTGGTGGATTTATTTAAG 1170 29 100.0 33 ............................. CTGCCCCGATGCGCGACACGCCCTTGTGCATAA 1108 29 100.0 32 ............................. TCATTAGGTTACTCGGCTTCGCGCTCTGGTAT 1047 29 96.6 32 .............G............... ACACGCTCCTTAGCACTCATGATTGCGGGATG 986 29 96.6 32 .............G............... CTGACAATTGGGCAATGCGCGCCCTGTTCACG 925 29 96.6 32 .............G............... AATCATAGAGTGCCTGAGTTTTTGGCCTCAGT 864 29 96.6 32 .............G............... CTCTCTACTATGGTGACAGGATTCCTTGAGTA 803 29 96.6 32 .............G............... CCGGAGACAGAATTGCGCGGATGACACTGGGA 742 29 96.6 32 .............G............... TAACCACTCGTGAATTTTGCGCCTCCGTGCAG 681 29 96.6 32 .............G............... GCTTCCAGTGCCAGCTCAGCCTGTTCCGCGCC 620 29 96.6 32 .............G............... TTCTGCCGTGGGCGGAATATCGCCTGTCAATC 559 29 96.6 32 .............G............... TCGCGCCAATGCCGCACCATCACGATTAGCAA 498 29 93.1 32 .............G..............C GACTGGAAAAGAGGGGCAGTTAATCGCAGGGC 437 29 96.6 32 .............G............... CCTCCGGCATTGATACGGAGTAGGCAGTCAAT 376 29 96.6 32 .............G............... TTCTGCCGTGGGCGGAATATCGCCTGTCAATC 315 29 96.6 32 .............G............... TCAGACAATGCTTTCTTATTCATGCAGTGGTT 254 29 96.6 32 .............G............... GATATAGATATGTCACATAATTTAATTGCGTA 193 29 96.6 32 .............G............... AGATTATAATTCATCCATTAAAGAATTATATA 132 29 96.6 0 .............G............... | ========== ====== ====== ====== ============================= ================================= ================== 35 29 98.3 32 CTGTTCCCCGTGAATACGGGGATAAACCG # Left flank : AGACGGAGAACAGCGCCGTGATCGCAACGGTAAGATCAAAGGTTGCCGAGTACCGCTCATTCATGAGGAGGAACAGTTGCAGTGGTTATCGCGCAAATTAGCAGGAGCGGCGCTGTTATCGACGGCTTGGGTAACACCGGAGTCCCCAATCTATTTTTACAAAGATGATATTAGGGGAAAAATTCAGCCAATATGTTTTGAAGGGCAAATCATCGTACAGGAAAATGAATCCTTTATTACTCTTTTAAGTCAAGGAATTGGTCCGGCTAAAGCTATGGGTTGTGGTTTACTCTCTTTGGGTTTGAGTTAGAGATGATCCTCGTAGCACAAATTTTTCGTATAGGGAATTTCGGTAGATCGGGATGGTTTAAGTTTTGTCTTTTTTAACATTTTGAAAAACAAATATTTTTATATTTAATAAAATGCGTTTTTTAAGTAAAAAACGTGGTGGAATTATTTATATCAAATAAGCTCTTTAAAAACAAATAGATATAATTAGT # Right flank : GGCTGGGTCACGCTCTCAATGATTAGATATTGTGATAAACTCCCTGCTTTTTATTATGGAGTGAGAGATGGCTAAAGTGGATGTGGTTTGTCGTTACTGTCATA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGTGAATACGGGGATAAACCG # Alternate repeat : CTGTTCCCCGTGAGTACGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGTGAGTACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 54645-58887 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKHQ01000054.1 Xenorhabdus sp. TS4 Xets_54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 54645 29 100.0 32 ............................. TGATTTTCGATGAGGTAAACGATCATCTGTTC 54706 29 100.0 32 ............................. AGGTCAGATTACGAAAGGATCTACGCTTTATT 54767 29 96.6 32 ............................A GTTACGAACCCCCCCAGTTACCTTGTCCTTTT 54828 29 100.0 32 ............................. AAATTATAATAATACAAATCCAGAGCATACAA 54889 29 100.0 32 ............................. AATGGTGCGCTTTTTCAGCGCTGTCTGTTAAA 54950 29 100.0 32 ............................. GCATCGCGGATTTCCTGTGCGAGCACCTTGAT 55011 29 100.0 32 ............................. AGAACCGAGTTAACCGACTGAATAGGATCATG 55072 29 100.0 32 ............................. CACCTGAATGAGGTGAAATTATGCCACCCAGA 55133 29 100.0 32 ............................. TCAACGCCTGAAAATAAAATTGATGGGCCATT 55194 29 96.6 33 ............................A GGGCTAACGCTTTGGTCGCTTCCGGCAACTCAA 55256 29 100.0 32 ............................. AGTGCATTGACGGTGCTGGTTACCCCCTGAAC 55317 29 100.0 32 ............................. CATCCACCTGTTTATTGCCGGTGATCTTGCGC 55378 29 100.0 32 ............................. CCCGCCCGGTACTGCACATAGTTTTTTGACCT 55439 29 100.0 32 ............................. GTACGCCTAATATCGTCGAAGGGACGACACCG 55500 29 100.0 32 ............................. TAATCAAAGCGCCGAATACGGCAGTGACTACA 55561 29 100.0 32 ............................. GCTATCTTGCTGTGATAATGATGGCATTGCTG 55622 29 100.0 32 ............................. TGTTAACGCCGTAAATCTGTTTGCAGGACAGC 55683 29 100.0 32 ............................. ACAATATGCTTTGCTGTTTCATGCCATCATTG 55744 29 100.0 32 ............................. GTATTCATCCCTCTTTGTTTCAATTACTCGAT 55805 29 96.6 33 ............................A GATTCCCGGCATTCCACGAGATCCAGATACGTT 55867 29 100.0 32 ............................. CGTTGCCGTTTGAGGGGGCGAATATTTTGGTT 55928 29 100.0 32 ............................. CGGTTGCGCTCACTACGTGAACACACCCACCT 55989 29 100.0 32 ............................. CGGATTTCATATTCCTGCCCGCTGACCCGCTC 56050 29 100.0 32 ............................. ATTTTTACTTCGGTGATCATTTGGCGACTCCC 56111 29 100.0 32 ............................. CGAGCCGTGGTGTAACTGGACTGCCACAGATT 56172 29 100.0 32 ............................. ATATTTTTCATTACTGAGATGCCCATTGTTAA 56233 29 100.0 33 ............................. GGGATTTAATAAATGAAATGCCAAATCACAGCC 56295 29 100.0 32 ............................. TTTCACTTCGGGTAATGATTTTGCTGTATCAA 56356 29 100.0 32 ............................. ACCGGGGCTTTTGATTTTAATGACATGCGTTC 56417 29 100.0 32 ............................. GTATTGCGTGATCAAATAGGAAATCATAGTAA 56478 29 100.0 32 ............................. AGCGACACTGGCAGCGGTTCTTGCTGCATGAG 56539 29 100.0 32 ............................. AAATATTAAGGTTACCCTCAAGAGACTGACTA 56600 29 100.0 32 ............................. GGGTAGGCAATATCGTGTATGAATGGACAGAT 56661 29 100.0 32 ............................. TACTGACTGAAATGCTCCCAGGTTCGAATTTC 56722 29 100.0 32 ............................. CGGTGCCAGGGGACGCATTCAGCGAACCACGA 56783 29 100.0 32 ............................. CCGCTCGCCATTCGCGAAACACTTTAAATATT 56844 29 100.0 32 ............................. CTATCTGAACAAGTTGCTATTAACACCACCCA 56905 29 100.0 32 ............................. GCGTTTAGCTTCACCACGTTTCAAAGTAGAAA 56966 29 100.0 32 ............................. GCGACAGCCGAGCAACGCCATTTGCTGCTGTT 57027 29 100.0 33 ............................. TTTCACACAACATTATTGGAATAATTTCCCCCG 57089 29 100.0 32 ............................. ACACCGGCATCGGGTTGGCTCTGGTGGGTAAT 57150 29 100.0 32 ............................. CAAACCCCGTTGCCTGCCTGTGCCGGGCGCTG 57211 29 100.0 32 ............................. CGCGGCGAGTACAAACAGCTTTATAGCCGCGT 57272 29 100.0 32 ............................. TAGCTAGGCATCCAGACAACATTAGCGTTGAT 57333 29 100.0 32 ............................. CGCATCCGGCGCTGTCACTCATCATGGTTGAT 57394 29 100.0 32 ............................. CCACTATGGAGTTTGGAGAAACCTTGCCAGAT 57455 29 100.0 32 ............................. TACGAAAAATCACAGGGCACGAAAGTGAGCAT 57516 29 100.0 32 ............................. CGCGGAAATGAGCTCATATTCAGATGACACGT 57577 29 100.0 32 ............................. GTAACACAATGGTAATGCCCTTAATTTTTTTT 57638 29 100.0 32 ............................. GCTAATGGGCGCCAGCTAACCGAAATCCAGCA 57699 29 100.0 32 ............................. AACGAATTCTCCCGCGCACTAAAAATATATCT 57760 29 100.0 32 ............................. TCACCGCCGCCCGTCTCGACCGTGAACAGCAA 57821 29 100.0 32 ............................. CGACTTGGAAATTAAAAAAAATGAATTTAGTT 57882 29 100.0 32 ............................. TATTTTTATAGTCAAATTAAAAAGGGTAAGCT 57943 29 100.0 32 ............................. TATTGCAATTGGATTACTATTACTTTCGTATA 58004 29 100.0 32 ............................. ATTGGGTGTTTGAATCCGTGCTTCCATCCATT 58065 29 100.0 32 ............................. CCTGTGTTCTTTGCCGTGGAATTGGCTCAGGC 58126 29 100.0 32 ............................. CGCCTCGAATATTCAACTATTTACACGCGTAT 58187 29 100.0 32 ............................. GATTTGATAGATGATGAATAATAAAAACAACT 58248 29 100.0 32 ............................. CTGATATTAATCCCCAGCTCGGCGCATCCAAT 58309 29 100.0 32 ............................. TTTGTTTAACAACATTTTTTTCATATTTTCTA 58370 29 100.0 32 ............................. ATTTAATTTATTCCATAACCGAAATCATCCGA 58431 29 100.0 32 ............................. TGTAGTTCTCTGCCTTTAAATTTGGGTTTTGG 58492 29 100.0 32 ............................. CGCCTTGGCATGCAGTTCGGCGGATTCTTGGT 58553 29 100.0 32 ............................. TGGCAGATACCTGATGACGATTTACAAAATCT 58614 29 100.0 32 ............................. TATTTCGTCAAGGTAGAACTAAAGCTGACTGG 58675 29 100.0 32 ............................. GCACACTGAATAACTCACCATCGCGATGAGGG 58736 29 100.0 33 ............................. ATGTTCCGGCATGGGCACAGGCAATTTTGTCCC 58798 29 100.0 32 ............................. CTGCTGGTCTGAAATTTACGCGATTCGACCAG 58859 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================= ================== 70 29 99.8 32 GTGTTCCCCGTGAGTACGGGGATAAACCG # Left flank : CCCCAACGAGGTCAGCAACATCTTGTAAAGCTGGGCGTTTTTTCTTCATTTTCAATGTAATGCAATCAGTTATTGATAGGTACAGAGGAATAACTCGCGGTTTTAACATATTTATACATCATTACAACACGCTTTCTAGTGAAAAATGCCAATATACTCGCATCTTATTTATCAGCAATTGCTGAAACTGTGATGACTTACACGTGCTTGAGTGAATATTCCAACATGTTGGTGGATATCCCCGCTACTCAATGCAATAGTTTTCAGACTCTTACTCTCTTTGTTGTTGAGTTAAGACCAACAGGTTCTTTTGCGATTTCAGCAATGGGAATCTCATAAATTGATAAGTAAGAGTTAAAAATATGGATGAAATGTGATCTGAATTACAGATGATAAATCGGAAGAATGAAAGAGAAAATTTGACTGACTTTATAGACTAAAAAAATGGTAGAATTTTTCCGCTCTAAAAAATTTTTATAAAACAGATGGATAAAATTAGT # Right flank : GTAATCCCTTGCCCTGCGGTAGATACCGACGACGTGTTCCCCGTAAATCAGGAAATTCTTATTATGAAATAATAACCTTAGTTAGCTCGGTTACTTTGTCGATAATGTCTTGAGGTGCTTTCTCAATAAATTTAACTTGACGATCTGAAAAGTCTAAGGATTTGACCTGATGGATAAGAATTGCACCTTGGGTCGATAATTCTTCGGGTAAGACAACTTCTAACATCATTCCCCTTACGGTACTGGTAATGGGGACCACAACAGCAAATCCGGTATGCTCGTTAAATATCTTTCGAGAGATCACAAACGCAGGGCGGCGTTTCATAATTTTTTTCCCTGCGCTCGGATCAAAATCCAATGAAACAATGTCTCCTTTGTCTGGTATGTACATCAAATCACTTCCTTACCAACAGAGTTAGCATTGATTCATTCTCTATCCTCATCTGTTACCGTGAAACATTCTTTAGGGCTTCCGGCTAACAGTAATTCCAACGTTAACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGAGTACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGAGTACGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //