Array 1 640320-634744 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042937.1 Methanothermobacter sp. KEPCO-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 640319 30 100.0 36 .............................. TCACAAGCCACCCCGTCTTCCTCCGCAGATTCGATG 640253 30 100.0 37 .............................. GTTGAATCTGACTGGATGAATTGCTTCAGGTCATCCT 640186 30 100.0 35 .............................. CTGGTCATTAAGTATCGCTGTGTCAAGTTCAAGGG 640121 30 100.0 38 .............................. GTTTTTACTTGAAGGATTTTATCCTTCTCATACTATAC 640053 30 100.0 38 .............................. TGCATAGGGTTGTAAAGCCCTGGCTTATTCTATGACTG 639985 30 100.0 36 .............................. AAGTCTCAAATGCCTCAGTAACTGGTAACATTTATG 639919 30 100.0 36 .............................. GAATGGGGCGATTGGCGGGGCTATCGCTGGATTCGG 639853 30 100.0 36 .............................. TTCATATGATTCGAGTGCTCCTGTGTTGTCTCCGGG 639787 30 100.0 36 .............................. GAATGGGGCGATTGGCGGGGCTATCGCTGGATTCGG 639721 30 100.0 37 .............................. CTTGGAAATTGAAGGATTAAGCCTGTTCCCACGGAAG 639654 30 100.0 37 .............................. GTCAATGATCATCGTATCCTTAACCCTCTCATAGATG 639587 30 100.0 39 .............................. GCAGCTTCACATGCGCGTCATTTGAGAGGTATGCGTTTG 639518 30 100.0 38 .............................. CGAGGATAGTGGAAGCCCAACCCCCCGTTGCACTATCC 639450 30 100.0 35 .............................. TCAAGGTACTCATCTGAGATTCCGGAGACAAATAA 639385 30 100.0 37 .............................. TGAATGTTGCGAGGTTCACATAGTCCCCGCTTCTCCC 639318 30 100.0 37 .............................. ACATATACTCTTCAGCTTCGACCTTCAATCATCCACC 639251 30 100.0 36 .............................. TTATGGATATGAGGAGCAAGTAGGGTTCTGGAAGAA 639185 30 100.0 37 .............................. TGTTTATCTGGTAGCTCATGGCGGTGGTGATCTTCCT 639118 30 100.0 35 .............................. TCAACTGTTAGGCAGACCCAATCAGCAGTCACCGG 639053 30 100.0 36 .............................. TCAGCACAGGAACACGGCAGGCCAGCACCGGTTTCA 638987 30 100.0 36 .............................. TTGAGACTTTGAATTGTTTCACTTCACTGCTCTCGC 638921 30 100.0 35 .............................. TGGATAGTTCAGGGTGTGGTTCCTGTGTCATCTTG 638856 30 100.0 36 .............................. CAGGTTACTGGGTCAGAGTGCATCCGATTACTTCGT 638790 30 100.0 36 .............................. GTACTCTGGTGGTGTGAAGCGGGCGCCGATGCAATT 638724 30 100.0 37 .............................. CAAATACGTACTCCCTACCCTCAAGGATGGATAGTAT 638657 30 100.0 34 .............................. TAATCAACAACGTCAAAGTTGAGGTCATGATCAA 638593 30 100.0 36 .............................. AATCGAAGGTGATAAGATCCGTGACAACCAGACCAG 638527 30 100.0 36 .............................. TATTTTTCACCTCTTACGGTTACTGACAGGGGTTGG 638461 30 100.0 34 .............................. TCTTATTAGATCCTCAACGGTTTTCCTGTAGCGG 638397 30 100.0 36 .............................. CATATACGAGTGCTCAGAGCGGCTCATGGTCCTCAT 638331 30 100.0 36 .............................. GCATCAACATTGGCGGATGCGTCCTCACCCTCACGA 638265 30 100.0 36 .............................. GCGACGAAGACGGGAAGACCATTAGGGAAACCTTGT 638199 30 100.0 36 .............................. ATGCCTGGGAGGAGCCAGTACCCGTTCTTCCTACCG 638133 30 100.0 36 .............................. AGATACGATCAGAGCCGAATATCACCATCCTCACAG 638067 30 96.7 38 .............................A TTTCTTATCAAGGAAGTCCTCGAGGATAGGCTCCCTGT 637999 30 100.0 37 .............................. GCTTATACACTGTCCTGTAATCTGCTATTGTGTCTGT 637932 30 100.0 36 .............................. TTTCCTGATGTAAATGGGGATTTTCGGGGCCCCATA 637866 30 100.0 37 .............................. ACAACTTTTGGTTTGAAGGGCACTTTCACTACTACAG 637799 30 100.0 39 .............................. CGAAAACCACCCCCAGGCCCTGGGTTGGAAAAAAAATAG 637730 30 100.0 38 .............................. AAAAAAAAGAGAAGAAAAAGGAAAGAAGAGGTGAAAAA 637662 30 100.0 34 .............................. TTCTCATGGGCTATTACGGTCCCGACCCATATGC 637598 30 100.0 35 .............................. CTGTCAGTGGGGTGACATTCATCTTCTTTGTCTTC 637533 30 100.0 37 .............................. GTGTGGGATGGTGAAACCTTAGCGATGGAGGGTGTGG 637466 30 100.0 37 .............................. CAGGACAACCCCGACCAGGGAACCCCAAACCAAAGAA 637399 30 100.0 36 .............................. GTATGATGGCCCGGATCGTCGGTTCATACCCTCTGG 637333 30 100.0 36 .............................. CGATATTCCCAACGACATTGAGTGCTTCAGAGTCAG 637267 30 100.0 39 .............................. GCAATCGGACAATATCAAGGAGATAAACCTTACCATTAC 637198 30 100.0 36 .............................. CATTAGGATTATTATCTCAATGAATACGGTGTCCAT 637132 30 100.0 41 .............................. GTGTGGGATGGTGAAACCTTAGCGATGGAGGGTGTGGATGA 637061 30 100.0 34 .............................. TTTTAACTGTCGATGGAATTTTACCTGTAGTCTT 636997 30 100.0 37 .............................. GTACCTCGCCGCAGCGGCGGCAGGTTTCGGTGACTGT 636930 30 100.0 35 .............................. GGGACTCCATTCTATCTCTACCTGACGAGGACCTA 636865 30 100.0 41 .............................. CATCTCCAGCTTCTACTGGCATCAGAGCATGGCTTCTGTTC 636794 30 100.0 38 .............................. ACTACGATGCGAATGCCCCGACTACCACTACAGAAGGG 636726 30 100.0 37 .............................. AACTTGTATGATATTTTACATTATCTTGAGTATCTTG 636659 30 100.0 39 .............................. ATCACATGCTCAACAATCCTCCTCTCGCGCGTCAAACGC 636590 30 100.0 37 .............................. GCGAAGGAGGTTGCAGCGGAGATACTATCGGAGCTCT 636523 30 100.0 35 .............................. AACAACAGGTGCCTTCTGCCTTCCTTTGACCCCAG 636458 30 100.0 40 .............................. TCGAGGATGTTTTCGAGGACTTCGATTAATGATTCATCGA 636388 30 100.0 37 .............................. CATTATCCCATGAAAGGGCCTCTATGTGGCCATTATG 636321 30 100.0 36 .............................. CAAAAACAGGGCCACCCCACCACAAACCCACCATGC 636255 30 100.0 36 .............................. TTTGTATCACCTCCTGTTCGTTATAGGAATATATAG 636189 30 100.0 37 .............................. TCAATTGTTTATTATATGGCTGGAATAACCTTAACAA 636122 30 100.0 39 .............................. ATACTTGTAAACGGATCCACATTACTATTTCCTGGTCAT 636053 30 100.0 36 .............................. TCTTCAGCAATCATCGGGTCCCCTCGTATGCGATTA 635987 30 100.0 36 .............................. TATTGTAAATTGTTTTTATAATAAGAGGCTTTATGA 635921 30 100.0 37 .............................. ATACTTTAATGGGAGGGGTGTATGATGACTGATGAGT 635854 30 100.0 36 .............................. ATACTTACACTTATCACAACAAAAAGTATTATCACA 635788 30 100.0 36 .............................. TCGGCACCTAGGGGATTTTATTGATGAGTATTTACA 635722 30 100.0 37 .............................. TCTTTTCGATCTCTTCCAGATTTCTGACTATCGCTAA 635655 30 100.0 36 .............................. CGTCAACTATCACCCCGAAGATGGCGTCGGGGTCAT 635589 30 100.0 40 .............................. TTACGATTGTATGGACGACTTTGTTGAATTCTTCAAGTGT 635519 30 100.0 37 .............................. TCCTTTTCCCCTTCTTTCTCGAAACCCCCTTTCTCAG 635452 30 100.0 36 .............................. TCTTCAGCAATCATCGGGTCCCCTCGTATGCGATTA 635386 30 100.0 36 .............................. TATTGTAAATTGTTTTTATAATAAGAGGCTTTATGA 635320 30 100.0 37 .............................. ATACTTTAATGGGAGGGGTGTATGATGACTGATGAGT 635253 30 100.0 44 .............................. TATTTTTTTAAGCCCGTATAACCCGTATTTTCTCAAAAAACGCC 635179 30 100.0 38 .............................. TACTGTGCGTGTTCATGAGTCCCGTAAGAAGTATTATA 635111 30 100.0 36 .............................. TATTTATTGATTCCTCCGCTAATCTCATGCAGTAAT 635045 30 100.0 34 .............................. CTCATTTTGTTTCACCTCAAATTTGTATTGTATT 634981 30 100.0 41 .............................. TCAGCAGGAAAAAATTGAGGCCCTGTCCTCAAGGGCCTACG 634910 30 100.0 38 .............................. TGCAGGGGCTTCAGGGTCGCATGGCTCATGCCATGCAG 634842 30 100.0 39 .............................. ATTACTGCCGGGTAGGGTTTGAAGTTGCTGTTTTCTATT 634773 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 84 30 100.0 37 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : AGGCTGTTAATGATCCATATGATTTCTTAAATTTTGTTTTTTTAGATTATAATGATTTAAAAGATTTTGATTCAGTGATGGAAATTCAAATAAACTCTATGAAATCATAAAACAGCCTTAATGATTCCAATAGTTTTATATCACACTAAAAATTATTTTTAAAGATTTTAATCAAATAAAATTATTTTTTCGGGCCATTGAAGTGATATCCTCCAGAAGTTTTTGACCATTTTCCAGCCAGCCTTTTATAATAACCCTATGTTATTTTAAGCTTATTTTATCATTAAAATGTCTAATAATTCATTTTTAACTTTTTATCTCGCTAAAATTTTGATTTTAATTTTTTAAATTATTCATGATCTTTATTTTTTAATTATAAAGCTCTACAACAAGTCGTCTGTCAATATAAATGAACTGCATTATTGGGGATCGACAAATTTATAAGTCTGAGAGGAGAAATTTCAGGGTGATACAGGCCAAATAGAGAAAAAATCCGCCCT # Right flank : TAAAGTGGATGAGAGGTGGTTAGATTGGTGAGTGATAAGACTAAGGAAATACAGGGATGTATATTTTTAATTCTATTCTTTTTGTTTTTGCTTTTCTTCGTTGGGAGCATGATATTTGGAGCATGATAGTTTTAAATAGATTATGATTGAATTGGGCCATTCTCTTAGTCTTGAAACCAGGTTTCATTTAAAATCAGGTCGAAGTGATTGTAATGCTTTATTGTGAATTTTCAAAAAAAGATGCTTTTAAATTAAAAATGTGTATAAATTCATTTAAAAAAATTTAGAGAGGTTAATGGTACTGAACCTGTTCCTCAACGCCACCCTTTGGTTTTATTTTTTCCATGGCCTCAAGGAAGTGTTTCATCGGGACATCCTCCGCGTCCATGTTCTCTCTGAGTGTCAGCATGGCGGCCTCCCTGCAGACGGCTTCAATGTCGGCACCAACGTATCCTTCTGTCTTATCCGCCAGTTTTTCAAGGTTCACGTCATCTGCAAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 2 1155538-1164678 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042937.1 Methanothermobacter sp. KEPCO-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1155538 30 100.0 36 .............................. CCTCAAGGATGGCGGATGGCATCTTAATAGTCATCT 1155604 30 100.0 35 .............................. AAAACAAAAACCAATAAAAACCAACAAAAACAAAA 1155669 30 100.0 35 .............................. GCTAAATCTAATTAAATATTTATTGCTGTCATTTA 1155734 30 100.0 36 .............................. GTTTATACTATCAATTATATCGCTGATCAATTCCTG 1155800 30 100.0 36 .............................. GATGCTGATAAGAATGATGCGGATGCACTGTGGAGC 1155866 30 100.0 37 .............................. ATGTATTTTATTATTGATATGTCTGTTTTTATTGCAT 1155933 30 100.0 40 .............................. GGATATTGGATATTAAATGTAAATTATTCTAAAAATATTG 1156003 30 100.0 38 .............................. GTTATTGTGTAGAATCTTGGAGTCCCTGATCCGGTTGA 1156071 30 100.0 36 .............................. GTTATTATGTTGCATTTGAAGAGTTGATACGCAAAT 1156137 30 100.0 36 .............................. TGAAAATGATTTAAGAGGGGTTATTTACCCGAATAA 1156203 30 100.0 36 .............................. GGATCACTGTGAGGTATTTTCTCCCCTCGTGATCCA 1156269 30 100.0 36 .............................. ATATGAGTATGCTCCCCCAGTCCTGTTCTTGCCAGG 1156335 30 100.0 36 .............................. TACTTCGTATGGGAGCTCTACTTTTCTTTCGTCTGT 1156401 30 100.0 36 .............................. TCAACTCAGAATACGTGGTGTTGGCAAGATCATTCT 1156467 30 100.0 37 .............................. GTTTATTGTTCTTTGCAGGATTTTCGGTTTGTTTTTG 1156534 30 100.0 37 .............................. TGAAAAACGGGTCAGTATCGATCTCACTGCTACGATT 1156601 30 100.0 36 .............................. TAAAAACGGATTATCCTTAACGAATAACTTCTCCTT 1156667 30 100.0 36 .............................. CATAGAATGCGAGTGGAGTGTCAACGAAGCCCGTGG 1156733 30 100.0 38 .............................. AAAAAATCAATGAAAATGGTGTGCATCACCCCTTTTTA 1156801 30 100.0 37 .............................. GTCAACGGTGTCATACTATGTTGAACTCAGCAGTTTC 1156868 30 100.0 39 .............................. TGAGGTCTTCGGTGACGACGCCGAAGCCCTCAAAATCCT 1156937 30 100.0 36 .............................. AAAGAAGATGGGAAGTCAGGGGCACAGCCCGATTTC 1157003 30 100.0 36 .............................. TCCTGAGCAGTTTCTCCGAGACTCTGATCCTATCCT 1157069 30 100.0 36 .............................. CAAAAACAGGAGGGTAACATCATCTCCTACCCCTAC 1157135 30 100.0 36 .............................. CATATGATGATGAGGGCCTCAGGGAGGCCCTCCTAA 1157201 30 100.0 36 .............................. GACTGCAGGGGGGTTGTACAGGCATGTGGCTGATAT 1157267 30 100.0 34 .............................. GATAGTCGATAAGGCGACACGTGGATTGCAGAGG 1157331 30 100.0 36 .............................. GTTTTCAGTTGCATCCATCATGAACCACCTCGTCTT 1157397 30 100.0 35 .............................. CAGCATCACGTGAGATGAGCAACAGCCTGATGAGT 1157462 30 100.0 37 .............................. CACAGGCAAGGGAATACTCCAAGGTAATCAGTGAAGT 1157529 30 100.0 35 .............................. AGGACTTGCAGGAGAAGGTGAAGGATCATGTTCTA 1157594 30 100.0 36 .............................. TAAAAGGTGATGTACGGGTACCATATGAAGAGTTGC 1157660 30 100.0 34 .............................. GAGATTTTGAAGGTGATGAGGCCCCCGGTGGTTA 1157724 30 100.0 36 .............................. CCTCAAATGTATCCGTCTCCTCGTCGAGGAGACGGG 1157790 30 100.0 37 .............................. TCAATTTTCGGGTTGAAACTGCTGAGTTCAACATAGT 1157857 30 100.0 37 .............................. AGGGCGATTAAGGAGACATTCACGGTTAAATCAGAGG 1157924 30 100.0 36 .............................. CTGCAGGGATGCTATTATCCTAGACTGCCTAGTAAC 1157990 30 100.0 37 .............................. TCAGCACAGGAACACGGCAGGCCAGCACCGGTTTCAG 1158057 30 100.0 35 .............................. AGTTCAGCATATCATCAGTCTTCAAGGCGGTTCCG 1158122 30 100.0 35 .............................. GGAAACGGGTTGAGCTCGCATTCAAGGGTTCAGGG 1158187 30 100.0 37 .............................. TATCTTTTCAGCATGTCCTTGAACGTTTCAATATTCA 1158254 30 100.0 35 .............................. TGGTGATCTACAGCAGGAAACTATACAAGGAGGTT 1158319 30 100.0 37 .............................. GTATAGGGGCTGTGTTCTCTGATTTCCTCTTCAATGA 1158386 30 100.0 37 .............................. TTATTCTTTTTCGTTTCGTTAGGGTGCATAGTTGTAC 1158453 30 100.0 37 .............................. ATAGGAAAGCATTATACTGGCTGCTGTGCCGCCCATT 1158520 30 100.0 36 .............................. TAAATCAGCTACTCTCAGGGGCACTCGCAAGGCAGA 1158586 30 100.0 43 .............................. TTAATAATCTGGATAGTGCAACGGGGGGTTGGGCTTCCACTAT 1158659 30 100.0 36 .............................. GTATTTCTGAATGAATTCGAGTATAAAGGCGTGAGA 1158725 30 100.0 37 .............................. AACGCCTGCACGGGGCCCTGCTGATGAACCTTAACCC 1158792 30 100.0 36 .............................. CTGTATGTCACTGTCTTTTTATTTTCTGTTTCGACG 1158858 30 100.0 36 .............................. AATCATGTTGCAGTCATGAGAATGACAACAAGTGGG 1158924 30 100.0 36 .............................. GGCGGAGGGAGTTCATCACTGAGGTCCTCGCCTTCC 1158990 30 100.0 37 .............................. TTTATTTTTTTGAGGGTGTACCCATCAATTCCCGTCT 1159057 30 100.0 36 .............................. CTGGGGCTAACCCGAATAGCTCGCCTTTACTGTTAT 1159123 30 100.0 36 .............................. TCTTTTAACAGGTTCACGATGCTCTTATCTAATTTA 1159189 30 100.0 37 .............................. AACTACCCTTATAGTCATACTTCAGGGCTGGGAGGGG 1159256 30 100.0 36 .............................. ACGGGATACCGAGGCCCTCGCAGCCAGATCAGAGAG 1159322 30 100.0 35 .............................. GGGGGAGACTATACCCCACCCCAGATGCTTAAACC 1159387 30 100.0 36 .............................. GAAGGGGTTCCGCCTCCTCTTCTTGGCCTCCTCCTC 1159453 30 100.0 37 .............................. TATCTCCATCAGATGGGACCCCTGTGGGGCTCCATGT 1159520 30 100.0 37 .............................. CTTAAACCGTTCGTAAAGCTGCTATGGTCCGCATCGA 1159587 30 100.0 35 .............................. GTCGGGGTGGAGTCGGACGCCGCCCCAGTGACTTG 1159652 30 100.0 35 .............................. ACTGATAGAAGAGGAGGTCAGGGATGCAGAGGAAG 1159717 30 100.0 36 .............................. CTTATGGAAAAATCATTCTCCCGCAGACCGGTGAAC 1159783 30 100.0 36 .............................. CTCATAGTTTCTCTGATGAAATACTACGTTATTTAT 1159849 30 100.0 36 .............................. TCTGCGCTGTCGATGGGCAGTTCAATGACTGCCCAT 1159915 30 100.0 37 .............................. TCATAGAAGAAAAAAAAGCCCTTGAGGGCGGTGATGA 1159982 30 100.0 36 .............................. ACGGACACGAAGACAGACACACATTTCAATCCCATT 1160048 30 100.0 37 .............................. ACCTCTTCAAGAAAGAGAACAACCGCGAACCCAAAAT 1160115 30 100.0 36 .............................. TCTTTCACTTCACACCATCCCAATCCAGGTGCTTGA 1160181 30 100.0 38 .............................. CAGCGAGGAGGCTCATGAGCTGGTATCTGCGTGCATAT 1160249 30 100.0 37 .............................. TATCTCCTCTCCATGTCCTTGAAAACCTCTAGAGTCA 1160316 30 100.0 36 .............................. CTTCACTGTCATCCTCCGCGAGATCGGGTACACGGT 1160382 30 100.0 38 .............................. TCTCCACGCGGCCTTCTATGGTTTCTTTTTCGTAGTAG 1160450 30 100.0 37 .............................. CATCTGGAGGGTCTCCACCTTCCACAGGCTCCCCCCA 1160517 30 100.0 36 .............................. GAGTGAAGATATTGATTCACTTATTCAGCTTAATTC 1160583 30 100.0 37 .............................. GATCATCTATATCCTCTCCTTCAGGTCCTCTCGGAGG 1160650 30 100.0 35 .............................. GGTTTGTTCATCCCCTCACACCCCCCCTCTGACAT 1160715 30 100.0 37 .............................. CTTCATAGTAGACGCTTGGGGGGTTCTTGGTGATTAG 1160782 30 100.0 36 .............................. TGGTAGAGGGCTTTGTCTGCGTATATGTCACCAATG 1160848 30 100.0 37 .............................. AAGAGGCTGAGAAGCGCAGCGAAACCCTCCAAGCCCT 1160915 30 100.0 36 .............................. ATGTTAGTGCGTATGACTTCGCCATCTCCCAGGCGA 1160981 30 100.0 37 .............................. TTTCAGCACATCATCCACAGTCTTCCGGTACTTGTGT 1161048 30 100.0 37 .............................. AAAGGGGAATTTGTATGTAAATACTACCAATTTGCTT 1161115 30 100.0 36 .............................. GATCATCCACATGATACCACCCGACCACCCCGAAAA 1161181 30 100.0 37 .............................. ATGATGAGATAGCAGAAAGGAATGAGTTCTATATCAT 1161248 30 100.0 36 .............................. TCTTCCCAGGCCTTTTCTTGCGGGGTCTGCGGGTTT 1161314 30 100.0 36 .............................. TGAGGCTATTACTGATTTCATAACCTCTCTACTTGG 1161380 30 100.0 36 .............................. CTCTGTTTCTTCACATCCCCCCCATGTGACTTATAA 1161446 30 100.0 37 .............................. TTGATCAGGGGGAATGGGATACCACCCCACCCAGCAG 1161513 30 100.0 37 .............................. TTTGGTTAGTGGTATCATTTATTCCACCTCCATTTCT 1161580 30 100.0 36 .............................. AGGATTTTCGGTTTGTTTTTGATTATCCTTTATATG 1161646 30 100.0 38 .............................. GTTCACACCACCCTCCAGGAGTTCATGGAGGAGGACTG 1161714 30 100.0 37 .............................. TTGTCTCTTGCGAATGATTTAACGTCTTCGACGCTAA 1161781 30 100.0 38 .............................. TAGAAATCTGCTCAAGTACTACCGCCAGAACCAACCCC 1161849 30 100.0 34 .............................. CTTGGAAGTAGCGTTTCAGTGGAGGGGTTGATGC 1161913 30 100.0 36 .............................. CAGAATCCTCTGGATGAGTTTCTGGGCGTGGGCCTC 1161979 30 100.0 35 .............................. AATGATGTTCTCCGCCAGGTCATCAATTCATCAGG 1162044 30 100.0 37 .............................. GAAAGCGCAGTGCAGAAGAAAGCCTTCGAGTACTATC 1162111 30 96.7 36 .....G........................ GATCTTCCATGATCTCATAGGCCCTGTCTTCCAGGG 1162177 30 100.0 35 .............................. CTCACAGATGTGCATGTGCAGCGCATCGAACACAT 1162242 30 100.0 36 .............................. GCTATGTGGATGGTGAATAAGAAGAGGAGGATATGA 1162308 30 100.0 37 .............................. AGGAGCTCTTAGACAAGCTCTACTTCCTTGACATCAT 1162375 30 100.0 36 .............................. TAGAAATCTGCTCAAGTACTACCGCCAGAACCAACC 1162441 30 100.0 36 .............................. GGATGTTCTCAGGGAGAAGTATGGGGAGGGGGATGT 1162507 30 100.0 36 .............................. CATGGGTCGTGCCATGCAGCCTCTAGGACCTGGTAG 1162573 30 100.0 37 .............................. TCTCTTTAAGTTCTCGAGATACCTCCGGGAGGCTTCG 1162640 30 100.0 37 .............................. GGGGGAATCTGGGCGATGCTACCTCCATGACATGATC 1162707 30 100.0 36 .............................. TGCAGGAGTTCTGCAGGCCTTTCTCACAGATTACAT 1162773 30 100.0 37 .............................. TAGGTAGCTTCCGCCTCTTTGGCATCTATTTAAATTA 1162840 30 100.0 36 .............................. AAGTTCCTCAATTTGTATATGCACTCTTTCAAATCG 1162906 30 100.0 37 .............................. GTTGTGTCTGGCTCTGACTGTAACTGCCGCTGGCTTT 1162973 30 100.0 36 .............................. CTGCAGCTGCCAGTCTCTCAATCTCATCCGCATAGC 1163039 30 100.0 37 .............................. GCGTATCTCATCGATACGGAATTGGACTTCGTCGTCT 1163106 30 100.0 37 .............................. AGGCCAGTGAAGCCACAGAGCTGCCAACTGTGAGCAT 1163173 30 100.0 38 .............................. TTAAATTATCAATATAAATTCGGGCGGCTTCTCTCCTA 1163241 30 100.0 36 .............................. GACCAAATTCTTCGTCTCCCCGCAGCGCACAGGTAC 1163307 30 100.0 41 .............................. GTTAACTTCTACGAGGAGTCCTACCTCCTCTACACGTTAAA 1163378 30 100.0 38 .............................. GGGGCAATTGTGGTGGTGGTTTCAGCGCTCCTAGCCGC 1163446 30 100.0 38 .............................. ACTACGCAGACACAAAGACAATCATGTTCCTCTCTGAA 1163514 30 100.0 38 .............................. AGGAAGAAACGGCGGAGTATCATGTTATCATTGTACTT 1163582 30 100.0 36 .............................. GCGTTATGATGCTTATGGTCGTTCTGTGTGGGTTAG 1163648 30 100.0 36 .............................. AATGGGGACTTTGAAGTGTCTGGCCGTGTTTACCCC 1163714 30 100.0 38 .............................. CAAAAATAATTTCAATGACGTCATAATCTTCAAAAAAA 1163782 30 100.0 38 .............................. CAAAAATAATTTCAATGACGTCATAATCTTCAAAAAAA 1163850 30 100.0 37 .............................. GTTTTTTATAAACAAAATATAATGAATGATGATCTTT 1163917 30 100.0 37 .............................. GATAGTACCATATTCCCCCCCATATCCTCCGCTTGAG 1163984 30 100.0 35 .............................. CTGTCTTCTTCGGGTTCTGTATCTCCTCCTGGACG 1164049 30 100.0 35 .............................. ACTCATATGTCGCATTAGCAGTGCGCCGAGAATAC 1164114 30 100.0 37 .............................. CAGGTTCGGCAGTTGATGTTGTGCTCTTTGTCTGTGT 1164181 30 100.0 37 .............................. ACATATGAAAATTATGTAAATGAACTTATAATACAAA 1164248 30 100.0 37 .............................. GAGGGAATGGTTCACAGGAGGGTACACCACCATCCCT 1164315 30 100.0 37 .............................. ACTGATTAGGAAGACCTCGCCATCAACCCTAAACCTA 1164382 30 100.0 36 .............................. TTGTAGGGCGCGAGGCTGTGCCAGGCCCCGCTGAGG 1164448 30 100.0 37 .............................. TCCTGTTTAAAATCACTAAATTTTTTTATAATTATAT 1164515 30 100.0 36 .............................. CATGAAGAGGAGTGAGACGATACGGTAGAGTTCCTT 1164581 30 100.0 38 .............................. CATGGTGGGTGAGGGTGGCGTCCACGCCGTACCTGTAA 1164649 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 138 30 100.0 37 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : GTATCTCATTTAATTATTTAAGGGCATTTAAATCATCTGATTTATAATTTGAGACATTATAAGGCTTTTTCAGGATTTTTAATGATTTTTTATAGATTTAACTATAAAAATTAGACATTAAAAATTTTATCGTACTTATATCACGCTATAAAATTTCAAATTATCATTTAAATACTTTATATCTTTTTTATTTCCATTCAGAGCCTTTTTAGAGGTTCGTTTTTCACAGGTTTTTCAACGTTGTCTTATAATAACTATATGTTATTTTAAGCTTCTTTTATCATTAAAAGACTTTATATTTGATTTTTGAATTTTTATCCTGTTAAAATTTCGATTATAATCTTTTTAAAAGTTTATGATCTTTATTTTTTACTTATGAAGCCTTACAGGGAGTCGTCTGTCAATATAAATGAACTGCATTATTGGGGATCGACAGATTTATAAGTCTGAGAGGAGAAATTTCAGAACGATAGGGGTCAAATAAAGAAAAAATCCGCCCT # Right flank : TGGGTTCATGTTCGTAATATATAGCTATAACGAATAAAAGAGGGGGTCATCCGGCCCCACAGAGAAACCTTCCACTTACAGCGTCAACCCATGCCTCACCAATCACCATTCTGTAGGTGGAACTGGAGGGATTCCAGTCATACACCAGGACATGGTAGACAGGCCTCTTAATTCTAAGACGGACAATCTTCCCCCTCGCATTAAAACCTGAGATGTACCCTGGGGGCTTCTTTATTAGCTTCGCCTTCAGCTTTAACCTACTGTAATCTCCGGGAACGGATTTTTTAACAATCTTGATGGCCTTTGATGAGGATATAAGGCCATAGGAAGATCCACTTAAGGCCACAGACCCCACGAAAACAATCGCTACAATTAAAGCAGCAATGATAACTCTTCTCACAGAAACACATCCCTTAATGAATCAGATCATCAACTCGCAATTGATTTTATAATCAACATTTCATTACAGCCCGTCTCCTCATGGTGTGGGACGCGCTGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //