Array 1 9317-10209 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIKLI010000231.1 Bacillus bingmayongensis strain P86 2373, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 9317 32 100.0 33 ................................ AATGATCTAATATTGTTCTTATTGGAAATCATA 9382 32 100.0 34 ................................ TTCCCAACTTGGTACGAGGCAGCAATGACTCAAG 9448 32 100.0 33 ................................ TATTTAACAAGTTAGATGAAACCTTTTTACTAG 9513 32 100.0 34 ................................ CTGTATGATGCAATATTAAAGTAGTCAATAATTG 9579 32 100.0 35 ................................ CAAAATGCTTGTTCCAGTGCTTCCTCGGCATCTTT 9646 32 100.0 35 ................................ TTGATAGTCAACTATATAACGTCCTTGCTCGGGGA 9713 32 100.0 33 ................................ CTGATATTGAATCCATTTCCCCTTTATCGCACG 9778 32 96.9 34 ..............T................. AAGAAACAGGAGTAAGTCCTGATGAAGCACTAAA 9844 32 96.9 35 ..........T..................... CAAGCTAAACGCCTAGAATGGTCTTGAAAATGCCA 9911 32 96.9 35 ..........T..................... CTTGATATGATTACTGAATTGTTCCAAAAAAGCGT 9978 32 96.9 35 ..............T................. ATTGATTCCTGGTATGAATGTTATCTATCAGAACG 10045 32 93.8 35 ..............T....T............ ATTGATTCCTGGTATGAATGTTATCTATCAGAACG 10112 32 93.8 34 ..............T....T............ ACTCTTCGTAAGAAATGAAATTCAGAGTTTTTTA 10178 32 96.9 0 ..........T..................... | ========== ====== ====== ====== ================================ =================================== ================== 14 32 98.0 34 GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Left flank : AGATGAGTATCCACCATTTTTATGGAAGTAGGTGTAACATTTGCTAGTATTAATTACGTATGATGTAAGCACTATTAGCGGTGCAGGACAAAAAAGACTGCGGAAAGTTTCAAAAGTATGCCAAAATTATGGTCAACGAGTCCAAAATTCAGTGTTTGAATGTGTTGTAGATGCAACTCAATTTGCTACTTTAAAAATGGAACTAATTAAAATTATTGATGAAGATGAGGATAGCCTCAGATTTTATCAGTTAGGTAACAACTATAAAAATAAGGTCGAACATATTGGTGTAAAAGAATCAATTGATTTAGAAAGTCCTTTAATTTTTTAAGTGCGAACGTATAGCACACATGAAATTCCTAGTACATTCGCACCTGAATTTTCATGATTTATAATTAAAATTTACGATTTTCTATACAAATTTCTTTATCAAATAAAAAAACTTGCATATTTTTGAAAAGAATTAACGCATTTGTGTATGATTTTGAACACAAATCGCT # Right flank : TATAATGATTGAGTAACCGATGTACACAAAAGAAAAGATTCAAAATAAGCAGCAACTGGTTTATAAATAAGCAGTTTCTTTTTGTCGAACGAAAATTGGATAAATCCAACCAATTTGTCTTGCAAACAAGACAAATTGGTACTACAATTTACTTAACAAAGCAAAGGAGGGATCTATTACAAGTAATGGATGAAATCAAAAACGGAAAATTGAGTGAACCTCTATTTTCTGTTTATACAACAAGAGAAGCTGAACAATTATGGGAACTTGCAGAGAATACCGTGAATAAATGGTGTAATCGAGGAAAGTTCTCTGAGAACGAAGCAAGGAAGAGCGGGAAAGTCTGGTTAGTCACACGTGACGGCATGAATAGACTGACTCGTAAATAAACATGAAAAAGCCCCCACCACCACCAAGCAGAGAAGGGCTTTTCCAGGTACACTACTATAAAAGAAAGGTTGATTCTAGATGGCAAATACCTATCTAAAAACTCCTAACAG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTCTTATAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2070-1265 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIKLI010000234.1 Bacillus bingmayongensis strain P86 2376, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 2069 28 100.0 38 ............................ TGTAAATGCCACGCCTCAAGATGGTGGTGTAACAAAAG 2003 28 100.0 36 ............................ TACCACGCTTAAACTAATAGCTTCCTCAACTGACTT 1939 28 96.4 36 ...........G................ TACCACGCTTAAACTAATAGCTTCCTCAACTGACTT 1875 28 96.4 37 ...........G................ TTTTGATAGGAACAAGTAAATGCCGATTGGTATACCA 1810 28 92.9 36 .........A.....C............ TTACGACGGCTATCCTTATGTTTGGGCAGGAAGAGC 1746 28 85.7 37 .........A....TA.......A.... TGATCGTATAGATATAGACGATACAAAAAATTCTGTT 1681 28 92.9 36 ..................A....A.... GGTTGATAACCCAGCACCCGGAGATTTAGTATTTTT 1617 28 85.7 37 .C.......A.....A.......A.... GAATGAATTGAATGTACTTAACATACAAAACTCCCCC 1552 28 92.9 37 .G.....................A.... GTACTGTTATAACGACAACACGTATGTCGACGAGGTA 1487 28 85.7 38 .........A......AC.....A.... TGATACAATGTAAGGTGAACAGCCATTGTTTAAGTTGA 1421 28 96.4 37 .......................G.... TGCATCAATGATCAATGTTAAGTTTTGAACAATTGTA 1356 28 89.3 36 ..........C.....T......A.... GTGGTAATATCTTAATAGATTTCCAGCAATGCGTCA 1292 28 85.7 0 .C.............A....A....G.. | ========== ====== ====== ====== ============================ ====================================== ================== 13 28 92.3 37 GTTTTATCTGAACTATGTGGGATTTAAA # Left flank : AAACTTCCACTAAACGATATGGGAAATACAGAAGCACAAAAGTTGCTGCGTGATATTGATAATTATCAAGTTATTCCCTGTTCTATATATGTAGAGAATCGTGAGCTATTTACTACATTTAAACAGGAAAAAGATTCGAAACAGCGAAAATTATTACGAATGCAAATCGAAAAGCTTACAACCTCTATTTCTAGAAAACAGGTTCAACGATACGGAATCGAAACAAAAGAAATTGATATTCCCGGACTTCAATACATTCACCTTTTAAATTGTAAGTACGATTTTGATAAAGAAAAGATAACAGGAACAGGAATTGTACTTCCGTAATTTTGCAGTGAACCTCGTTTTTACAGAAAATGCAGAAACCCTTGATGTGACAAGGTCTTTCGGCATGTTTTAAGAGAATTCAAAAACACAATCAATGGTTCACTGCAAAATACTGATTGATACCTATGGCAAAATGTTGCTATCATAAGGTGTATCATCCGTATCTAGATAGG # Right flank : TTTTTAAAAGTATTAATACTGTTGTTAGCGAAACACTTAAGAAGAGCTTGTGGTCATAAATTTTTAGAGGAAGCATCCAAATAGGATGCTTTTTTCTTTGTTATATAAAATTTATATAATAAACATGAAATTGAACAAAGTGGACAATTGAAAATATAGTACCTCATATATTGATTCATAGCCAAAATGTTTTAAACAAACGTTTGTTTAATTTTTCCACAATTGATTTCCTCATCATATAAGTAAAAAAGAGATAAGAACACTTTTTTTAAGTGCATTATCTCTTTTCGAATATGCATTTCATATCCCATGTGAATTTACCACATATTTCAATGGGACTTACAGATTGCTCTTCAAAAAAATTATAACTTACATTTTGTGAAAAATATACAATTTTCAATCCTTTCAAAAATTCATGGTCATAATGTCAGTGACTTATATATATTAAAGAATTATATTTAGTGATAACAAGAAATTCATTTTCTTATAGTTTATTAAAT # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATGTGGGATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 8802-9417 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIKLI010000234.1 Bacillus bingmayongensis strain P86 2376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 8802 29 100.0 36 ............................. GCATATAACGTTGCAACTGATAGATTATTAATGTCA 8867 29 100.0 35 ............................. TTAGCTTCTTCTTTGGAGTAAACTTCTGTTTTCTT 8931 29 100.0 36 ............................. TAAATTCCTTCCGCTACGCTCCAGTCAGACATTTAC 8996 29 96.6 37 ................A............ CTCAAAGTATGAGCACTTATCAAGGGAGTGCCCAAGA 9062 29 96.6 36 ................A............ AATAATAATGCAATTATTCAATATGTAGATGCAGTG 9127 29 96.6 37 ................A............ TTAAATGTAAAACTGATACTAGGCAATAAAAAAGAAG 9193 29 93.1 36 ..............G.A............ ACTGCTGTTAGAGTTTGAGTTTTTAAGATAACCTGA 9258 29 93.1 36 .............C..............C CAATACATTACATGGGATGGTCAATTACAAAATGCA 9323 29 86.2 37 ............T....C.....T....T TCAAAAGTTACCCTAAAGTAATAAAAAAGGTAATTTA 9389 29 89.7 0 A............GG.............. | ========== ====== ====== ====== ============================= ===================================== ================== 10 29 95.2 36 GTTTTATCTGAACTATGTGGGATATAAAG # Left flank : ACGGAAAACGTAAAATTCTTACTTTTTTTATTCGGTTTATTCTCAAAGATATATAGATTCTCTGCATATACTGCGTTTGATGTTTTTAGAGCTTCTTTGATAAAACTCACAAACATAAAACGATACGAGAGAGGAATTACTTTGCAAGTAAAGCTTACTTTCAATCTCATTATTTCCCTCCTTAATCTTCCATATAGAATTATTATAATGTATTCAAAAATTAAGATTCAATAAATCTGTAGAAATAAATGGAAAAATATTTCTGTGCAAAGAAAGATTTTTTTGCTTCCATATAGTAAAGATAAAAATCATGTGGTACTTTCATAATTTTGCAGTAAACCTCGTCTTTATAAAACATGCTGAAAACCTTGATATGACAAGCTCTTTCAGCATGTTGTAAGAGAATACAAAAACACAATCAATGGTTCGCTGCAAAATACGGATTGATACACATAGTAAAATGTTGATATCATAAGGTGTATCATCCGTATATGGATAGG # Right flank : GTAACCTACTTAGCTTTATTAGGGTATCTTTGCCCATCCCCCCGAACTGGGGGATGGGCAAACAAATTATTGAAAAAATCTTTATAAATCAAGGGTTGTAACTTCTTTTAAAAATGAGTATGTCAAAACATATACATTTCAATTGAAACATTTCAAATAATTATAAGTCGTATTTTTGAAATGAAAAATTCTAAATTTTTAGCTATGTCATAAAGTGTATTTTTACAAACAAAAAGACCACAATGACTGAGTGGTCTTTTCCAACAAAGGATTAATGGCTATTTATCTGTTTAAAATGATTTCTGCTGCTCTTAAGCGAATTAGAGGATCTTCACTATCAAGATATTCTTTGATGACTTGTAATGCTTTCTCCTCAAGAGAAGTATCACCTTGAGGCTTTTTATTACCATTTATTACACCTAAGATGATTTCGTAGTGTTTAGTTAGATCCGCTATAGTTCCAGGATAACGCATTGAACCTTTTAGTTCCTCAGGTAGTT # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATGTGGGATATAAAG # Alternate repeat : GTTTTATCTGAACTATATGGGATATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //