Array 1 49403-48972 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADOFU010000004.1 Pediococcus pentosaceus strain FAM 20675 FAM20675-i1-1_scf4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     49402	    36	 100.0	    30	....................................	GAATATATCCAGCAAAGTTGCGCTTCCCTT	
     49336	    36	 100.0	    30	....................................	AGGTGCAATGAAGTTTTTAAGCGTATTAAG	
     49270	    36	 100.0	    27	....................................	TGTAGCATCATCATCATCATCAACTTC   	
     49207	    36	 100.0	    30	....................................	CAACTGAAAATGATGAAACAAAATTCTATG	
     49141	    36	 100.0	    30	....................................	ATAGTCCTTACGTGTTTGCTCTGGCAAGGT	
     49075	    36	  97.2	    30	...........A........................	ACGAATATTTAAGAATGCTGGTATGGGATT	
     49009	    36	  88.9	     0	...........A................AA..T...	|                             	CC [48981]
==========	======	======	======	====================================	==============================	==================
         7	    36	  98.0	    30	GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC	                              	       

# Left flank :   CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACAGTCTGTTACAGATGAACAACAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCATTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAACTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAACG
# Right flank :  AAACTGTACCCCGCAACGGCTTAGCCAGCTGTTACAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATCGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATTGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACTAAAGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATC

# Questionable array : NO	 Score: 6.14
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.68   Confidence: HIGH] 

# Array family : NA
//