Array 1 3112-182 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKKG010000006.1 Prevotella sp. PINT PINT_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 3111 29 100.0 36 ............................. AACATACTCAGATCTGCTGATTTCAACGATCTCACA 3046 29 100.0 36 ............................. GACCTACTGTTTTGGAGACAGTTATTTCCTATCTGT 2981 29 100.0 36 ............................. GGTCTGGCAGCATATACAGGCTTGCCAGTTACTCCC 2916 29 100.0 37 ............................. ACTAACACTGACTACTGGAACCTGTTTGGATCTCAGT 2850 29 100.0 35 ............................. GATCACACGTAAGACTGGCACAGAGGACTAATCAA 2786 29 100.0 36 ............................. GAGCTTAAGGTGCTGGATGCTGATGTGAGAGGGCTG 2721 29 100.0 35 ............................. ATCTCTCGTTCTTATGACACTTTTGACGAAGACGG 2657 29 100.0 36 ............................. TGAGTAGTACGAGTAACGGTAGGTGGAGCACCTTTA 2592 29 100.0 36 ............................. ACTATTTTACCACCTTGATATACTATAGTCAGCAAA 2527 29 100.0 36 ............................. GCGGACGACATTTCACAATTCACAAGAGGATTGTCT 2462 29 100.0 35 ............................. GATTCAATAACTTGCAAAAGTGAGAACGAAGCACA 2398 29 100.0 33 ............................. TCTTTTGAAGAAAAGACTTTTAATTGCACCTTA 2336 29 100.0 34 ............................. ATACACAAGCTGTATCATAAGGATTGGCAGAAAC 2273 29 100.0 37 ............................. ATAAGCTCCGCGCTTATATAAATCACATTAATTTTAA 2207 29 100.0 37 ............................. TGTTTCTAAGACGGAAAAGTTTCAAATAAAAAATGTT 2141 29 100.0 36 ............................. GCGGCACGTTTATCAGCAGTAGCAGTCTGAACAGCA 2076 29 100.0 36 ............................. TGTACATATCGAACCCGAAAACAATTAACCACAATG 2011 29 100.0 36 ............................. AATAGGACTCTGCCGGGGGCTGTATGCCCTTCGCAT 1946 29 100.0 36 ............................. TCAATGTCAAGTATCGTGAACGGCAATCCTTCGCTT 1881 29 100.0 36 ............................. AAGTGACGTTGATTTGTCCATTTTTTCACTTGAGAA 1816 29 100.0 35 ............................. GCGGTAATATAATCAATAGAAGACGGAGATTGAAC 1752 29 100.0 36 ............................. CTTCTGTGTAGATGCGGAAAGTTGGGCGTTAAGCGT 1687 29 100.0 34 ............................. AAGGTGGGAACTTGAAGAGTAGCAAGACGAACGA 1624 29 100.0 36 ............................. TATTATTGTCACATTGTATATTCGTCCTGTTTCTTC 1559 29 100.0 34 ............................. ATTTCGGATAGTTTTGACACTTATGACGATGAGA 1496 29 100.0 37 ............................. CATTTCCTGCCTTGAAAACTACTTTAATCATGCGTAA 1430 29 100.0 35 ............................. GCAGAAGGAGAAACAGCAGTTCCCGAAGAGGGGGA 1366 29 100.0 35 ............................. TGCGGTTAATAACTAAATAGAAGAGCAAATGGCAG 1302 29 100.0 34 ............................. TCCTTATGACGAATAGAGCAAAAATAAGAGGTAC 1239 29 100.0 37 ............................. TTCAGGCGAAGCGAGTGGAATGCCTTGTTTTAATGTG 1173 29 100.0 36 ............................. AAGAGAGAATCGCCCTCAGGGTCAGAAGACAAAACT 1108 29 100.0 35 ............................. TGTTTTAACGTGTGGTTAACTCGCTTTTTCTTCGA 1044 29 100.0 35 ............................. GAGTTTGATTTTACAAATAAAGTACCTTTCAGTCT 980 29 100.0 36 ............................. AGACGAACAAAAGAGTTTGTACGCAAAGTTATATGC 915 29 100.0 36 ............................. GCATTAACAACGCGTTTGTACTCATAGAACAAACGA 850 29 100.0 36 ............................. CAAGGCGCAAAGATAGAATCGTGATTACGAGTGTAT 785 29 100.0 34 ............................. GTGCTATTGGTAGCTCTATTAATCAAGGTGTTTC 722 29 100.0 36 ............................. CACTATCATTTCAACATCTTCGTTAACGGAGACTAT 657 29 100.0 34 ............................. AAGCTCTCCGCAGTCCTGAGTTGACTGGTAATAT 594 29 100.0 35 ............................. TTAAGGAACGTTGCCGTGTCGAAAAAGTCCTTATC 530 29 100.0 35 ............................. CGCCTCTTTCTCTGTGTCGTAGTACGTTTGTACAG 466 29 100.0 34 ............................. GATTGAAATAAAACAAGCCACTTGTGTGGTTTTT 403 29 100.0 37 ............................. TGGACACTTGATGTTGCTATTGACGAAATAGGCATAG 337 29 100.0 34 ............................. CTGGTTCTTAAATATCTTGATTCCTGTAGAGAAA 274 29 100.0 35 ............................. TTCGGTGAAATCTGTTCTGTGGTTTACAACAACGT 210 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 46 29 100.0 35 CTTTTAATTGCACCTTATGGAATTGAAAC # Left flank : CCTTTTAAAATGTATTGGTAATGTACGTTATATTGGTGTATGATTTTGGAGAAAAGCGTACAGGAAAGATGTTGAAGCTTTGCCGTCGTTATCTCAATTGGATTCAGAATTCAGTCTTTGAGGGAGAAATCTCTGAGGTGAGATTGAAAGAGATGCTTATGCTTGCCGATAAATTTATGGATAGAGATTCTGACAGTATAATAATATTCAAGAGTGAGTTTCAGCATGGTATGGAGAAGATGATTTTAGGTATGGAAAGAAAAAAGTTGGACAATTTTCTTTAGAGACTTTGTTGTCGATGTGATGGTTGTGGCTGGAGGTTGTATCTTTTGAGCGAATCAAGCGTTCTTTGACTTATTGATTTTTAGTGATTTATAGCAGTTGTCGGTGGGCGGGTGTTTTTTTATTATTGGTAATCGACAGATTTTGGATATTTTTTTGTAACTTTGCAGTGTCGTAACAGATTGATGGACAGACAGGTCTGTTTGTGATTGTAACGG # Right flank : CAAATTCAAAAACAAATAAAAATGATGAACAAAATAACTATACATTCAAGATAGAAGTGCAATTTCTTGACTGCATATGAGTCCCCCTCCTTCTGTGTATAAGAGGTTCCGGAGCGTAGCGACAGGGTTCTCTTATACACAGAAGGAGGAACCTTCCCATTAAAGATTAACCTGCAATGCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGCACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 135921-137438 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKKG010000002.1 Prevotella sp. PINT PINT_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 135921 37 100.0 37 ..................................... TGGCTAATCCAAGAATTCAATTACTGACAGATGATAT 135995 37 100.0 37 ..................................... TTGTAAAAACAAAGATGCATTAGGAAAACCTATAATG 136069 37 100.0 37 ..................................... AACAACGTTAGCGAACTTAACGTTAAAGTGTTGAAAG 136143 37 100.0 39 ..................................... CGGTGAAACTATCTGGAGAGTAGATGGTGAAGCAAAATA 136219 37 100.0 39 ..................................... TGCTGTAGCAATAAAAGGTATACCAAAACACCCTATGCT 136295 37 100.0 38 ..................................... TCCTAGCAAGATCACATTCTACCAACTCCATGATCCTA 136370 37 100.0 39 ..................................... TAACTTAATTTATTTAACTATGAAAAAATTAGAAAAGAA 136446 37 100.0 37 ..................................... AGGTTGTTGAGAGAACCTCAAAGACAACAGGCGATGC 136520 37 100.0 38 ..................................... TCTTTCTTGCAAACGGTCTTTGAAATATTTATATAAAA 136595 37 100.0 35 ..................................... AATTTGCTGAGGTTGCCAAAGACGGTAATCCAGAG 136667 37 100.0 32 ..................................... TAAACATTTTATTAACCATTTAACAATTATCT 136736 37 100.0 36 ..................................... CTCTTCTTCACCTATGGAACAAAAACAGGAGCTGTA 136809 37 100.0 38 ..................................... TGGTAGGCAACTCTGCGGAAAATATAAAGCGCACTCTT 136884 37 100.0 39 ..................................... CGGTATGGAAAAAACGACAATGATAGCTGGCATGATTGT 136960 37 100.0 36 ..................................... CAGTTTGCTGAGGTTGCTAAGGATGGCAATCCTGAG 137033 37 100.0 39 ..................................... ACAACGTTAGCGAACTTAACGTTAAAGTTTTAAAAATTA 137109 37 100.0 38 ..................................... AACTAAAGTTGAAATCGTTGGCGAAAGCCAAAGGCAAA 137184 37 100.0 38 ..................................... TTATGGCAAAAGAATTCATTGCCGATGCAGGTAAAACT 137259 37 100.0 33 ..................................... TCGCCTTTATGAATGTCGTGGGTGGCATGGAGG 137329 37 100.0 36 ..................................... GCAAGGCAAACAGAGGGTCTCTAATAAGAATCATTG 137402 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 100.0 37 GTCTTAATCCTTGTTGTAATGGAATATACTCTGTAAG # Left flank : CGCAATCATAATAGTTATTACAATATTTTACATCTGTTAATAGTAGGAAAAAATTAACAACAAGAATTCTTGTTGTTTGAAATCCTTTTGCATCAAAAACGGAAAAACAACGCTCAATTTTGTCTTTTTCGACAGTTTTCCACCTCACTTTACACATTCCACATGATAAAGTAGTACTTTTTGCATGGCAAAATTATACCTTTCACACTGCAAAATGCCACTTTTCCCAATCTTTTTCATGTCAAAAAGATTGACAAGCCAAGTACCTTCAAACATAACAACTTGATATCCCCCTCATTATATCTCAAAGCTATTTTCTCAATATTTCTAACTTTACTCGCAAACTTTCAAGAAAATGTTAAAATCACTACATACCAAACCGTTTAACGCTTGGTACAAGCAAACTTTAATTTGTTTTTCCATACCCTATTTTCTGTAAAGAAGTTGTTTAAACTAACGTGAGTTATATGACGAAAGTCCCCCTACGCCATTTTATTACA # Right flank : GAGCAAATATCACAAGTCCCTGAGTATCAACTCTATTTTCTTCACATCGGCTCTATTTCATCTGATTTCAGATGAAAATATGTACCTTAATGTGCTGCAAAGTTACGAAAAAAAGTCAAAGAACACTTCACTTAGAACAAAAAAATCAGAAGAAGAGTGTATTTTTACTATGTGTTATAATGTCAACTTCTATATTCTTCCCTATTATTTTCATCATCTTCAGATAATCTGTTGATACCGGCAGTATGATTATGCTATCATGATTGTCATAGGCTTCCTGGACTGCGGCAAGGTCATTTTTTATCATGGAGCAAGTCTCGACAGACGTTTCCGCCAAGAATATTGATCTTTGTATGCGTGTGCATCCATGCCGTTGCAGGTATTTGCTTACCAGGCGGCGCACTTTATCATTTTCAATATCGTACATTACGAAGAAGAGCATTCTGTTTGGCGTTTTCTTTATTTTATCGGTTATTCCCAAAATTCGCTTGACGCGCATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTGTAATGGAATATACTCTGTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //