Array 1 15128-19059 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKKE01000011.1 Lactobacillus delbrueckii strain UMB0003 ERR1203589.17957_1_1.11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 15128 28 100.0 33 ............................ CCACGCTTGAGAACTCAATGGTTACTGAGTTTT 15189 28 100.0 33 ............................ CTATGGCCTTGATGAAAAAGAAGCCGATGAATG 15250 28 100.0 33 ............................ TGATGGAACAAGATATCTGTTTGCGTCACGACG 15311 28 100.0 33 ............................ TAAGCCAGCGCGTGGTGGGCTTCATCGATCAAA 15372 28 100.0 33 ............................ TTCCTCTGCGCTCCCCGGTTGGGTTTTAAAGCT 15433 28 100.0 33 ............................ CATATCGGGTAAGGCCAACTAGTCAAGTTAAGA 15494 28 100.0 33 ............................ TAAGTATCAAGATAAAATTTACTGTAATTCCGG 15555 28 100.0 33 ............................ TCAATACTACTCGATGTACGGGATCCGTTGGCA 15616 28 100.0 33 ............................ TAATCTAGCACTAACTCTTTGTTTAATTATTTT 15677 28 100.0 33 ............................ TATCGGATTCTCTCATGATTTTAAATGCCCCAT 15738 28 100.0 34 ............................ TAACAACTTGACCACGATCAAGGCTCTTGACCAA 15800 28 100.0 33 ............................ TACAGGCGAATCAAGACAGCAATCAGAAAGGCA 15861 28 100.0 33 ............................ CGGAGAATGGTGTAACGGCGTGGATTTACGGTG 15922 28 100.0 33 ............................ TTTACCTTTGAATTTTTCCGTTGATAAGACTTC 15983 28 100.0 33 ............................ TAAGAGTCCAAGTGTATTGGGTTGGATCGGTGC 16044 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAATATTGCCAA 16105 28 100.0 33 ............................ TTGTTCTGACGCCGTGACGTAAGCAGATGTCCT 16166 28 100.0 33 ............................ TCAGAGACACCACTGCGTTGACGGTTTCGCCGG 16227 28 100.0 33 ............................ TTCTTGATCTCTGCCTTAGCTTGGTCGACCGTG 16288 28 100.0 33 ............................ CATCGCCAGCTACCTGGCAGCTGAAGAGTCAGA 16349 28 100.0 33 ............................ CTTAACGGCCATGACATTGAGAAGGCCAAGGGG 16410 28 100.0 33 ............................ CTCTGCTGTCAAGGAAGCTCTGGCCAACGCTCA 16471 28 100.0 33 ............................ CTTTTGGAATGCCGGTCTTGCCCGCCCACTGAT 16532 28 100.0 33 ............................ CAGCAAGGCTACTGTCAAGACTATCTTAGGTAC 16593 28 100.0 33 ............................ TTTCCTGATTAACAAATTCGTTGGCTTAAACGA 16654 28 100.0 33 ............................ AGTACTACTGGACAGTAGAAGATGGACAGGTGG 16715 28 100.0 33 ............................ TGGCTGCCGAAGTAGTCATAGTCGATGCATCCT 16776 28 100.0 33 ............................ AATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 16837 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 16898 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 16959 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 17020 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 17081 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 17142 28 100.0 33 ............................ TTGAAGAACTGGAGTTGTGAGAAAATGCAAAGT 17203 28 100.0 33 ............................ CTCAATGGTGGCCCAGGTTGGGCCAATTGTGAC 17264 28 100.0 33 ............................ TTTACTCTGGCGCATCCCTGCTGCGGACGGCTA 17325 28 100.0 33 ............................ TCGCAGCCCAGGCCCGGGCTCTCTTGGCTTCTG 17386 28 100.0 33 ............................ TCGTTGCGCCTTTTTTGTAGATCCCGCCTTTTA 17447 28 100.0 31 ............................ CTTACTTTTTGTAAGCAAAAAAGCTAACCTG 17506 28 100.0 33 ............................ TCTAGCAAGCTTTCAAGCTTGCAAACACAATTA 17567 28 100.0 33 ............................ TTCCCATGAGTTCATGAGAATAGATGGAATTGA 17628 28 100.0 33 ............................ CGTGTTTAAGGCGTCTATGCATGATTGCCTTTA 17689 28 100.0 33 ............................ CGCCTTACTAGATAGTAGTAATAACATAATTCA 17750 28 100.0 33 ............................ CTAATGAAAATGAGTTGATTTCTCTCAAGTCTG 17811 28 100.0 33 ............................ TTAGTTTGATTCGGGCTGAATTGAAAGCACCAA 17872 28 100.0 33 ............................ TCACCGATTTTTCCGGAGATACGCATAAAGACC 17933 28 100.0 33 ............................ TTGTCATTGTGAATCAGTACACCGAGACCATCA 17994 28 100.0 33 ............................ TGGCCGTGCCGCCATTTACGGTGTCCCACAGTT 18055 28 100.0 33 ............................ CTTGACACCGTTTTTTAGTAGCAAGCCCGGGGA 18116 28 100.0 33 ............................ TTAAGAAGTTTTTTTATTTTTTCTTTTCGGCTA 18177 28 100.0 33 ............................ TTTCAGTTTGCGAAATATCGAACACGCAAACCG 18238 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 18299 28 100.0 33 ............................ GAAGGGTGAGACCAACGCACTGGCAAGATGTGG 18360 28 100.0 33 ............................ TCAAAGTTAGGGTTACGGCGCCAGGCCTTAAGC 18421 28 100.0 33 ............................ TCACTGGAAATGGAGGATTAGATGGCGAAAACA 18482 28 100.0 33 ............................ TCACCAAGAAGAAAAGCTTGTAGAGGGCTTATA 18543 28 100.0 33 ............................ TTATACGCGTTTCCGTCGGTAATGCAAGCATAA 18604 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 18665 28 100.0 33 ............................ CTGCCAACACTGCAGACTTACATGATCTGCTGG 18726 28 100.0 33 ............................ TGATCAGAACTAGAATCTACCCGGTTACGGGCT 18787 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 18848 28 100.0 33 ............................ CTGCTGAATGAACTCATCAACCGTGATGCTGCT 18909 28 100.0 33 ............................ CTCAGACTATTCTACTTCAGACTTCATCTATAC G [18931] 18971 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 19032 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 65 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGTGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGAATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGACAAACGGCTACCGGTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //