Array 1 112540-112750 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTWX01000003.1 Paenibacillus sp. An7 NODE_3_length_357381_cov_74.302670, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================= ================== 112540 31 93.5 29 ................A........T..... TCATCTGCCTAAAGTAGAAAGGCAGACCC 112600 31 100.0 29 ............................... CGGTCGGCCTAAAGTAGAAAGGTAGACAA 112660 31 100.0 29 ............................... CTGTCTGCCTAAAGTAGAAAGGCAGACCC 112720 31 93.5 0 ...............A.........T..... | ========== ====== ====== ====== =============================== ============================= ================== 4 31 96.8 29 ACGCCGAAGGCTACAGGGGTTTTGCCCTACC # Left flank : TCCACCGCAATGATCGTGCACTATTTGACAATACAAGAATTGCATTTGATGAATACGTATTTGGGTGTGGTGCTGCCCGCAGCCGTCTCTGTGTTTAATATCTTCCTGATGCGGCAGACTTTCATTGGAATCCCGATTGATGTGAGAGATTCAGGAAAGATAGATGGTGCATCGGAATTCCGGATTTGGTGGCAGCTAATATTGCCCCTGGTGAAACCGGGGATTGCGGTTATTGCGCTGCTTGAGGTGATGTCATTCTGGAATAGCTTCCTGTGGCCGATCGTTATCCTTGAGGATACGAATAAGTATCCGCTGTCTTCAGCACTCACCTATCTAAATGGACAGTTCTCTTATAATTTCGGCTGGATCGCCGCCGGAACGATGATTTCTGTTATCCCTATCATCCTGGTTTTCCTCTTTACACAGCGGTACTACATGGAAGGCATCGCCGGAGCTGTAAAAGGATAACTTGTCCCTTGCCGATGTAAGCGGCAAGAGAA # Right flank : CTCATCTGTCTAGTGTAGAAACGGCAGACCGACGCCGAAGGCTAAAAAACCTAACATCAGCCAGTCAGCCAAGTGGATATTAGGCTGACATGCCAAAGGCATCAAACTAACTAATATCGAGGAAAGGGTGGAGTGAAACGACCCGCCACCCAGTCCCCCTTACAGAGCGAGTGTTCTGGATTCTGAGCGACTTTTGGCTTTGAATGCAGAGATTCCTCTACCTAGAAACACTCCGCATTCAAAACAAGTCGGAGCGAAGAAGTCAGAACAGGAGCGCCTGAAGAGGCCAGAATAGGAGCGATCAGAATACGAGCTGAGGAGCGTGAAACCTTTTGCAAATCACCTTTATCCCTTTAGACGAACGACCATGTAACTACGAATTCCCGTACATGCTTGTCCAAGGAACCGAGCATAAGGTCGACCAGCCTCCGATGTCCATGATGGGACAGAAAAAAACACCGGGAGACTGGGAACAGCTGTGGACATGGCTCGAAGAGAAA # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACGCCGAAGGCTACAGGGGTTTTGCCCTACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1919-731 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTWX01000034.1 Paenibacillus sp. An7 NODE_35_length_20944_cov_35.733688, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1918 33 100.0 36 ................................. AATGTTACGGCCTTTGGCAAACTAGCGGAATTGATC 1849 33 100.0 35 ................................. ACCACTGGTATATTGTATTGCTTAAACTTGGCGTA 1781 33 100.0 33 ................................. ATCGCTGACGGTGCAACGGCTGCGGAACTAGAA 1715 33 100.0 33 ................................. AACAACAAGCGAAGTCATGCCCCGAACAACAAT 1649 33 100.0 33 ................................. CGAGGTGGCGCGCCGTATGATACCCATTGTATA 1583 33 100.0 35 ................................. AATGCCACCGTCAATGTATGTTGCCACATCGACCA 1515 33 100.0 32 ................................. GCGTCAAAATGCTAGCATTATGAGTCCTGCAA 1450 33 100.0 35 ................................. TTGTTTGATAACTGGTTACGAATCTCTTGTAACCT 1382 33 100.0 35 ................................. TTAAAAAATCAAATGGCGTGAGACTCCCAGCACGA 1314 33 100.0 37 ................................. ATAATCAAGATCATTGTTTCGTTCCTGCTCTTTTTTG 1244 33 100.0 35 ................................. CCAATTTCCATTACCTTGATGGATCAGGGCGGTCA 1176 33 100.0 36 ................................. GCACATACAAAGGCAATACACCAGTTGCGCCGTATG 1107 33 100.0 35 ................................. ATCAAAAACGGGTCCGGCTTGATAGACAGCAACAT 1039 33 100.0 36 ................................. TCTTTACTCTCTACATAGTCGGTCAATAGCCAATGG 970 33 100.0 34 ................................. GCCCTTGTTGCAATCTCCCCGGCAACCGTTTTTA 903 33 100.0 35 ................................. AATCGCTTCCTCTTGCAGTTTTTCATTTTTATCTT 835 33 100.0 36 ................................. AATCAGATCGACACAGTAAAACGAATTTTCGGGAGG 766 33 87.9 0 .......................CA.G..C... | CC,C [734,739] ========== ====== ====== ====== ================================= ===================================== ================== 18 33 99.3 35 GTCGCACTCCGTATGGGGTGCGTGGATTGAAAC # Left flank : AAGTAGGTGACATATGCTTGTAATTATTACGTATGACGTGAGCACGATAGATAGTGAAGGAAGAAGGAGATTGTCCAAAGTATCAAAGAAATGCGTAGACTACGGTCAGAGAGTGCAGAACTCTGTGTTTGAATGTATGCTAAGTGCGGCTCAGTTCAAACAATTACAGTTGGAGCTAGAAGCAATGATTGATAAAGAGACAGATAGCCTTCGTTTCTATAACCTTGGGAATAATTATAAAAGTAAGATACAACATGTAGGAACCAAATCTTCCTATGATATGGGAGATCCACTCATCTTATAGATGAGTAGTGCGAATGCCAAGCTCACATGATTTTCCTGAGGGATTCGCACCTCGAAATTTGTCGAATTTTTGTTAATAATAATCTTCTGGTAACATACGTCAAGAATACACATGACTTTGGATTAATTTAATGCTCAAAGTAGCGAAATAACGTAATTATTTGCTGCGAAATAGGATTTTTACGTCTTCTTTTGCT # Right flank : AATAAGCCTTTAACTCAGCAAGGACGTAGAATCTTTAGAGCGTATTTTTTGGGAAGAACTTGACTCTGAGGAACAATACGAAAAGTATTACGGTGATACACCAGTAACGAAGCTCGTACGTAAAATTGTCGACCTCGACCGCCAAGCAGTTGTTGAAGCATTCTCGAAATTCATCACAGCTGAAAATTTAATTAGTTGAGTTAATTATCAATATTGTAAAAAAAACACATTAGAGCGCAAGCTTTGCATTTAGCCCTTTAGGTGGAATTACGCATTTATTTAAGATCAAACTACCGAAAGCTCGGAGTGTGCTAGCGATTATTGATGGGTTCAATAGGAATTCGTAGGATATATCGTAAATGTGAAACTAGTAAGGAACTCAAAATAGAGTATGATATTTCAAGGAATTTCTGGTCATCTAAATGATAAATTATAGCCTGTTTTAAAACAGTTGAATTTTTATAAAGTAATTAAAAGAACATGCGTACAATATTTATCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA // Array 2 10849-10491 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTWX01000034.1 Paenibacillus sp. An7 NODE_35_length_20944_cov_35.733688, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 10848 31 100.0 36 ............................... ACTCGGTAGGCCGTAACTATCAATAATGAGATTAGT 10781 31 100.0 36 ............................... ACGTCGGTTATGGATCGCTTGAATCCGTCGGCGCGT 10714 31 100.0 37 ............................... TATTTATCCAGGCATGGGAAATGGTATTGATCAGCGT 10646 31 96.8 36 .......A....................... TCCTATGAACGCTGCGCCTATAAGCATCCAAGAAGT 10579 31 100.0 27 ............................... GATTAGATTTTTATAGCAGAACAAGGT Deletion [10522] 10521 31 83.9 0 ........AA.A..A...........A.... | ========== ====== ====== ====== =============================== ===================================== ================== 6 31 96.8 35 CGCACTCCTTATGGGGTGCGTGGATTGAAAC # Left flank : GCTAGTATAATAAGCAAGATTGAAGGTCAACATATTTAGTCAATCCGTTGACTTTTGAATTTTAGATAACTTAATCTTAGTGTCTTTCCATCTTTATTTTCAGGCTCTCATTTAAAAGTATTGTCATGTGTTTTTCACTTGTTATTTGTCTCTATCTAAAGACGTTGTAGCCAAGCCAATTTTCTTCAAGTACCTACAAGAAGTAATAATCAGAACCTAGACAGATAGCCTTCGTTTAAACCCGAGAGATAGTTATAAAAGAAAAGTAAGTTACAACTTATAGAATCCAAATCATTCTAGGGTTTGGGTGGTGCGATTGCCAAGCTCACATAATTTTCCTGTGAGCTTCGCACCTCAAAATTTGTCGAATTATTGTTTATCGTAACCTTTTGGTAACAAACATCAATCTAATGTACATAATTTCAGCTTAATGTATGTTAAATTAGCGGAATAACGTGCTTATTTTTAAGAAAAAGGATATATACGTCTTTTTTTGCTGT # Right flank : TGTACAAGTATTACCAAGCGTGTTATAGTTTACCTCGTCATCTTATACTTCGATTAAATATTAATAGCTATCTCCTCCTTTTTAAGTACATAGATTTAAAAGATTACTATATAAGAAATAACAAAAGACAAATGAATTTAACAGGAAAGCTTTCCGCAACTTAGGCCGTCGAATAAACACCACTATCCAATAGGTGAGAAATAAGTGAATAATAGTCCTCGAAATTTTAAAAAATCACACATCATATAACGAGAAGACAGTTGTTCTTGTGGTGATTAACGACAAGGAGAGGGATTAATGTCTTATATAGCACATATACGAAAAAAGGATGGCGCTATTCAAACCGTAGAGAGTCACTTGTTTGGTGTAAGCAAAGCAAGCGGCATATTAGGAGCTAAAATTAGTGTTAAGCACCTAGCGTCCTTAGCAGGATTACTACATGATATGGGTAAGTTTACTGATGAGTTCAGAAACTATATTCTGCTTGCAGTCACCAATTC # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCACTCCTTATGGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCTTATGTGGGAGTGTGGATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //