Array 1 78828-77539 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABOGF010000001.1 Bifidobacterium pseudocatenulatum isolate MGYG-HGUT-03683, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 78827 36 100.0 30 .................................... CATCACGAGTCTTCCGCGACCAGGTCGGCG 78761 36 100.0 30 .................................... CATCACGAGTCTTCCGCGACCAGGTCGGCG 78695 36 100.0 29 .................................... GCAGTAGTATTACCGTCGATATTGACTGA 78630 36 100.0 30 .................................... AAACGCGCGTAGTCGGTAGTGTCCAAAATG 78564 36 100.0 30 .................................... ATCGTAACGGCAGGTTCTACGCAGCGTTCC 78498 36 100.0 30 .................................... CCAAGACGGTGTCCGAGTACGGACGTGTGG 78432 36 100.0 30 .................................... TAAGCGTTGAGTATTTTTTGCGTCATGTCG 78366 36 100.0 30 .................................... TATCCGCTCCAGTCGTCCGTGTTGGATTCC 78300 36 100.0 30 .................................... ACATGATGGTTGCGACGAATCCGAGCAGGA 78234 36 100.0 30 .................................... TGTTGTCGGATTGGACTTACTATTCTGATT 78168 36 100.0 30 .................................... TGTTGTCGGATTGGACTTACTATTCTGATT 78102 36 100.0 30 .................................... TGAAAAATCAATCCAAACCGTCCCACAGTT 78036 36 100.0 30 .................................... TCCGCTATCGCAGCCAAGTACGGTACGACG 77970 36 100.0 30 .................................... ACTTCGCGCGCGGCGGAAATACAGCTTGCG 77904 36 100.0 30 .................................... CTTCGCACCCTTAGAGAACGTCTTGATGCT 77838 36 100.0 30 .................................... CCGGCCGTGAACGCGTTCAGGTCGCGTTCC 77772 36 100.0 30 .................................... TTGAAGTTGCACCGAATACCGCGACTTACG 77706 36 100.0 30 .................................... AAATTCATCACCGATGGGCTAAACGCGGAC 77640 36 100.0 30 .................................... AGCGTGAAGGCGGGGAAGTTGACCCGTTGC 77574 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTGGTCTAAGTCTTTGATCTGACAGGCATCTGAAAC # Left flank : TTCCCCGCGCCTAGAGGGGACGCCGGTGCGCTCCTCCTCGAGCCGGTCCGCGTACCACGACAGCAACGCGCCCTTGCTGGGATAGCCAAGCTCGCGGATCACGTCGGCGGGCGCAGCGCTCGTATTTGACGTACAGGTCCACGGCCCTGTCATGCTGCTCCCTGCTGTACTTCGCCATAAGGGGTTTTCCTCCCGGTCGGGGAGTCCAAGAAAACGTCATCACCTCGTTCGGACTGGATTGACACGCCATTTTGGACTACTTCAATTTAACAAAACACATTGCGCATGGATAACGTCCTCTTCGCCCCTAAGACGGTCGAGAAAATTCTGATAATCGTTGATACCCATGAGCACGTAGGACAGCGTTCCGTTTGACGACAAGGACCGGCGCACGGTCGGCCTTAGACAGCACCGTAGCGGTGCGTCCATTACTGAGTTCGCCGACTGGCACAAGATCCTCAAGCACAAACTCTGTCAAGGTCACATCCACTTTCCCTCCG # Right flank : CGATAGCCTTGGAGAATCCTGAACGTTCTATGAGAACTGAACATAATCTCCATCGATATACCGACTTCTTCCCTCTGTCAAAAGGACTTTTTTGTCGCAGCATTCCAGGTCCAGAAGCTGCATATGGTGTCTTAATAATTCTCGATGCAAATAAAGTAATTGGCCATTATCACAATATTGAGTTATATGAAGCATCACAAGCATCCTGCCCTCGGCAAGAGCGCCGGCAGTATCAACTACCAGTTGAATTTTATCATAAAGAGAACCCAGAGAACTGGTATCAACACGCGGTTTAGCCATTGCTATCATTGACTTTATATCAGCTTCATCAAGAATACTCAGAGGCAAATTCTCTCTCCATATTTCTTCTTGAATAATCGACTTTATCTCAGTTTGTAACAACAATAATCTACTCAATTCTTCAGGATTAAATCCGTCATTTAACTTCTTAACTGCAGCCTTTTGAAACAAAGCATCATAATCTAGTACTCCTGCGCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTAAGTCTTTGATCTGACAGGCATCTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //