Array 1 46146-48681 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZU01000026.1 Desulfatibacillum alkenivorans DSM 16219, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 46146 28 85.7 36 .G.....T......C.......A..... GGTGCGAGTCCCCAAGCCACAGATTCCAGGGCGGAG 46210 28 100.0 37 ............................ TGCGGCTGAGCTTCAATGTCTCTGGAGTCCCCTTTGT 46275 28 100.0 36 ............................ TCCTTGCGGATTGCGTGGAGAAAGCTGACTCCGAGT 46339 28 100.0 36 ............................ CACCGAAGATGCAACCCTGCCCTTTAGGTGGGAAAA 46403 28 100.0 37 ............................ AGTCATACGATGAATTCATGAAGCATTTCGCCTTTTT 46468 28 100.0 37 ............................ TCGGCGTCTTCAAAGTTCGGCCCACCCCAAAGCTCAG 46533 28 100.0 36 ............................ AACCTTATCAGCAACGGCGGCTTTGAAACTGCCGGG 46597 28 100.0 36 ............................ GGCGAGATCGTGCGCCCTGCCCTGGCGGATCGTAAG 46661 28 100.0 36 ............................ TTTTACGCTGGATGTTCAATAGCTCCTTATTGTAAA 46725 28 100.0 37 ............................ GGGCGAGATCGTGCGCCCTGCCCTGGCGGATCGTAAG 46790 28 100.0 36 ............................ TTCTCCTGGATCTGCCATGGAGTCGATGCTCTGTAC 46854 28 100.0 36 ............................ ACGGGCCAACGACGATTCGCACCGTGTCACCTGTCT 46918 28 100.0 36 ............................ AATCGCCTGTGGCACGGCCATACACAAAAGCGGGCC 46982 28 100.0 36 ............................ TCAAGCATGTCAAGGACTCGCTCAACGGCATTGTAT 47046 28 100.0 37 ............................ CTTTTTCGCCCTCAACAAAGCCGTGGCCCGTGGAAAC 47111 28 100.0 36 ............................ CTGTACGGTCCGGCGATATACGGTATGCTTCCTTTT 47175 28 96.4 36 ..........................G. ACATGAATATCATCGTAGGGTACGTTCCCGGGGAAG 47239 28 100.0 36 ............................ GCGTCATTTCAGCCGCGGCAGCCTCAAGCTCTCTTG 47303 28 100.0 37 ............................ CAAAAACCAGAGGCACGACATCGCCCTCTTTAACTGT 47368 28 100.0 37 ............................ TGAAGACTACTGTGAATCTGAACTTTTGGACAGAAGT 47433 28 100.0 36 ............................ ATTAAAAAGACTTGAAGTACTCGAATGGTATTTTGA 47497 28 100.0 36 ............................ CGCGTTTTGTTTTTTGGTTAGAACAAAAGGCCATGT 47561 28 100.0 37 ............................ GCAAATATAACCATACAGAGTTCAAGCTCGATAGCAG 47626 28 100.0 37 ............................ TTGTCCGCTCTTAGGATTAACCATACATGGCAAAAGC 47691 28 100.0 38 ............................ CACCTGTTGCATGTTAACAGGCTTCTGATTCTGCTGAG 47757 28 100.0 36 ............................ CTATCCGGCATGCTTGATGATTTGATGATGGACTCA 47821 28 100.0 36 ............................ CACTCTGGCCGGGGGCGCGTCCGGGGCAATATACAG 47885 28 100.0 36 ............................ CGCGGAGGATGTAAAGGATGTCATGCCGGACGCCGT 47949 28 100.0 36 ............................ TAGGAACGTTAACGAGGTTCCCGTCAGCTTCGAAAT 48013 28 100.0 36 ............................ CTCGTTTTTCGCCGGAGAACCGCTTTTGCCATGTAT 48077 28 100.0 36 ............................ GGTCCGCGTTTTCCCCAGGCTTACGCATTGTCACGA 48141 28 100.0 36 ............................ TTTCCAGGATGATCGACGGAGCTGTTGAGGTTAAAG 48205 28 100.0 35 ............................ CCAGTCGGCGCATTTTTTGCAAAGACCATAGCCAA 48268 28 100.0 37 ............................ AGCGGTAAGGCAGGCGGGCTGCGGTACGGAATGGAAC 48333 28 100.0 37 ............................ TCACATAATCCAACTTGCTAAAGCCGGTCCTGACTCC 48398 28 100.0 36 ............................ CGTTCTTGTAGGCGCTTCCTTGGCCCCACTGGGGAT 48462 28 100.0 37 ............................ CTTTCGAACTTGGCGGCCTTGGCGCAGGACTCGGGAT 48527 28 100.0 35 ............................ CATTTTCGGCCAAGGCGTTCGCAAGCCACTCCGGT 48590 28 100.0 36 ............................ TGCCGTTTCCGGTTGCAAATGATTTGACTGTGCTCG 48654 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 40 28 99.6 36 CTCATAACCCCTCATGGGGATGGATAAC # Left flank : GATCTTCATGACGACCGCTTCCGGCGCCCCTGATCGAACCATGTTGCGCACAGCAGTCCTTCTCAAATCATGAAACAATCGATGGCCTAATTTTGCTTTAGTGCAAGCATTTGCCCATGACTTGGAAAACTGGTCTACTCGGCCCGTTCCCCGTTCGTTAAGAAACACCCAGGGTAGTAGGCTTTTGCGCTTTTTATGGAGACCCTTCAACATGCCTTGCAACTCCTCATCCAAAAAAACCAGACGGCCTTCGTTGTTCTTGGTCGTACCGGGATCCAATTTGGCTGTGCCCCTATTGAGATCGACTTGAGCCCAAGTTAACCTGCATACTTCACCTCTTCTCCATCCTGTTTTGTAAGCAAAAGTTACCAACACTTTTAGGTGGGAGGGCAGGGCCTTTCGCAAAGCCAAAAATTCATCATGTTCAAAGAAACCTGTTCTAACATTATTTTCCTTCAACATGGGAATGTGTGGCGCTCCTGCTATACATTTCTTTATCT # Right flank : CCCTTTTAATCATTACAAAAAACCTATATTTTGTCCATATTTTGAAGCAATACTCCATCAAATTCCTGTGTTTTTTACTTCACACCCCGGGGGATTTTGCAGGACCGGGGGTTGAAGTTCTGGGTCAGAGCACCTGGTAGTCGGATTTGTGGCTGGCGTCCTTTGTGGCGAGGACCTTTCCTTTTACCGCGCCGTTTTTGGGTTTTTGTCCGAGGAGGTGGACCACGTTGACGTTATGCCGGTTTTCCGCGGTGATTTCCGTCACGCGGTCTCCGGGCATGATGATTTCGTGGATTTTGTTGCGGAGCTCCAGGAGCGCGGCTTCGGGAAGGTCGCCGGTGAACACGGAGTATTGAGTGTGGGAGAGGTATTTCCGCAGGAGCTTACGGAATTTGTTGGTGCGTTTGGCTTCCACGTCGTAGGTCATGATGACGAACATGCCGCGCCTCCTTTATGCTTTGCGTTTGAATGATTCGTAAGGGGTCAGGCCCATGACGGAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCATAACCCCTCATGGGGATGGATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //