Array 1 39839-41388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQA010000030.1 Anaerostipes hadrus strain MSK.15.40 NODE_30_length_41388_cov_175.822, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 39839 30 100.0 36 .............................. TTTCATCAAGAAGATCATACTTCTCCTGAAGCTCCT 39905 30 100.0 37 .............................. AGTGTTGGGATTACAACTTGTTTTTTTGTTCCAGAAG 39972 30 100.0 37 .............................. TAAATGACATTGAGCTTGTAGCTGCTGCATTTCCATC 40039 30 100.0 36 .............................. ATAATTATCATCGTTCCCGATGCTTACTTCGTATAT 40105 30 100.0 36 .............................. GTACAAGGTATTTGCACCGCCAATTCGTGATCAGAG 40171 30 100.0 39 .............................. AGAGTCTTATGCTGATGAAGGCTGTGAATATGAGGATAG 40240 30 100.0 35 .............................. TGTTTTTTCTCGTCCGTAATCGATCACAGCGTTCG 40305 30 100.0 35 .............................. TTGGTTTTAAATGTCTTGAAAGAAGATATGAGTAA 40370 30 100.0 36 .............................. TTCAATTCGGCATATTGAGTTACAAGTGCATCTTTT 40436 30 100.0 36 .............................. TTTGCATAGGTAGTAGGCAACTACGCTAGCCAATAC 40502 30 100.0 36 .............................. TTCTCGTAGCCGTATTTCTTCATCAGCTCGCTCATA 40568 30 100.0 37 .............................. TATGTAAATATAGTCACTCAACGTTTACTCCTTTTTT 40635 30 100.0 35 .............................. TCATAATTACAGATGCGATACTGGCTGCTAATCCG 40700 30 100.0 35 .............................. GACCTTGATACGCATTCCAATCACCGTTGCAAGCT 40765 30 100.0 36 .............................. TCGTTTAAGTCCTCCTTCATTTCTAATTCTTTCATT 40831 30 100.0 35 .............................. AGCGCAGATAGATTGATACTCCGCCCGATCATCAT 40896 30 100.0 36 .............................. TCGTCTAACTCTGTCGTATGATTAATCTTATCTTCT 40962 30 100.0 36 .............................. TCTATACACTGTTTTTTTGCTTCTTCTGCTATTTTT 41028 30 100.0 38 .............................. TGGAAAGTCACATAAGACTGACAGGGAACAAGAACTAT 41096 30 100.0 35 .............................. TTTATTGATCCAATTAAGAAGAAAGCAGAGCCGGA 41161 30 100.0 37 .............................. TAGTCCGTTATGATCGTAAATTTGATATGTAATTTAT 41228 30 100.0 36 .............................. GTACTATCTTCCTCTCCATATTCAAAAGATTCAATC 41294 30 100.0 35 .............................. GACCTTGATACGCATTCCAATCACCGTTGCAAGCT 41359 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 24 30 100.0 36 GAATTAATAGAATCATAATGGAATTTAAAT # Left flank : AGAAACGCATGATAAAAATTAGGCATTTTGCATAAAAGTGCCTAATTTTTATTTTTTTGAAAATAAGCCTAAAAATAGCCGTGCCCACGTCATGCCCACGGAAATTTTCTCGCGTGGGCATGACTTTTATAAAAATGACGATAAATTGGATTATTCAGACGATAAATTGGATTATTCAGACGGTGATATTTGATGCATATATGACTGTATAGTGTTTGCTCGAAAAGTATATATAATGAATGCGTGTATTTAACTTGCATATTTAGCAAATAAGTTTCATAATAGAATGTGTCGAACAAAATCAACTTGAAAAATTAGGGGGTTTCTGTCGACCCATGATAGTGCAAAAAATATAGGGGATCGACAGAAGGCGAAAACGCCTAAAATAGGAGGTGTTGCAGAAATATATGATTAGGGACAAGAAAGAAATGTTGAATTTTGAAGAGGTCGACAAAATAGAGACGTTTTTTGGCTTAAATAAGGGGATGATTTTGGGACGG # Right flank : | # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAATCATAATGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 53757-54285 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQA010000019.1 Anaerostipes hadrus strain MSK.15.40 NODE_19_length_60462_cov_146.603, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================================== ================== 53757 29 100.0 38 ............................. GTTAGCATTACTTTGTTCATATATCCTCCACTTCTGAG 53824 29 100.0 37 ............................. GCATTACGACAGTGGTAATTACACGAATACGCCAGTG 53890 29 100.0 38 ............................. GTTGTTTCCGATAAGATTTTCATGCAAGTGTAGTAAGT 53957 29 100.0 38 ............................. GTAAGATTGTATAATGTAAGCAAATCTGCCCACACAGA 54024 29 100.0 37 ............................. TGAGCAGGAAGCAGGAAATTGAGCATCCCCACTCCAA 54090 29 72.4 59 TT..........T....T.....AA..TT ATATTGGAAATATAGATATGGTATAAAAGTTATTATTAGTTATATAGTAGGCTCAATCT 54178 29 82.8 50 .........C...A.........G.C..G AGTAAATTTGGGGGGATATTATAAAAAACATGAAAACAGAATTTTTATGG 54257 29 75.9 0 A..A........TTT..T..A........ | ========== ====== ====== ====== ============================= =========================================================== ================== 8 29 91.4 43 GAATTAATAGAAACATAATGGAATTTAAA # Left flank : GGAAGGTGGATGTGTTGGTGAATAAGAAGGATCTGTCTAAGGTTGAGAGAAGTCAGATAGAGGATATTGTTGTTCGGAAAGTGGGGTGCCAGTTGGGGGATGTGGTGATTAGTTCGATTAAGACGGAGGAGTAGAAGTGTATATGGAATAGAGGGTTTGGGTTCTCTCTGGATGATGTTCTTGGGTAATTTTGGAATATTGTTCAGAGAGAATTTTATGTTTATATATGGATTTGTATATTAGGGTTGCATATTTGATTGATTGGATTCATAATAGGAAGTGTCAAGCTAATAAAAAACTTGATATGATAAAAATATAATGATTTCTGTCGACCTGTGATAGTGTAAAAAACGTAGGGAATCGACAGAAGTAAAAAATGGCTAAAATAGGAGGTGTTGCTAAAACATATGATGAAGAGTGAGAAAGAAATGATATATTTTGAAGAGGTCGACAGAATAAAGGTGTTTCGTGGAGTAAATAAGCAGTTGGTTTTGGGACGG # Right flank : ATTAGTATAAAAAGTTTTCCAATATGGACGATTAATATTAAATTTCATTGGTATAATTTAAATTTCAATATGAAAAATTACATTGATATTATAATAGATAGATTTACAAAAAGCAATAACAAAATAAAATATAAATATCATTAATATAAGGGTTGACTAAATATAAGTGAAAGAGTATTCTAAAAACAGGAAGGAGAAATAACACCTATGCGTTTAGAATTACAGATGGAATTATTGAAACCAGAGATAGATATTGATTATCGTAGAATCATAATATCTTATCTAAAATTTGCATTAGAACATTGTGAAGGGGGAAGATTTTTCGAAAAATTTTATAAGAATCGAGATAACATAGTTAAAGATTATTGTTTTTCAACAGTTTTTAGTAAGCCACGATTCACGAAAGAAAAAATTTATTTTGATAAAAATGAAATGAAAATCATATTTTCATGCAGTGATAGGAATCGAACAGGATTAATTTTCCAGACAGCATTTTTAGC # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.57, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATAATGGAATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 783-26 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQA010000063.1 Anaerostipes hadrus strain MSK.15.40 NODE_63_length_7275_cov_182.498, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 782 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG TAA [764] 712 30 100.0 36 .............................. GTTGTTTGCTGCTTTGAACATTTCTTCTGATATAAT 646 30 100.0 34 .............................. AAGATAGTCAATAAGTTCAAATGGATCAGAAGTA 582 30 100.0 37 .............................. ACTAATGGGAAGACTGACTAGAAAGCCGGACATAAGT 515 30 100.0 36 .............................. TCAATGTACGCCATGAAATCACTCCTTTTTATCCGT 449 30 100.0 34 .............................. GGATCAATCGTTGCATATAAGGACTCTCATTAAG 385 30 100.0 36 .............................. AGCTTTATAAGATTCAAGAGCTTCGATCACACATCT 319 30 100.0 36 .............................. CGAAGTAAAAGTAATTGATTGGGAAGCAGGAAAGCT 253 30 100.0 35 .............................. CTAATTAGAAAAGGATACGACATTTCGCCATATCT 188 30 100.0 35 .............................. GAGATTCAAAATGCTATCAATTCGTTAGCGTCTAC 123 30 100.0 38 .............................. GCACAGTTTGAGGGTATATTTAATGTTACGATACCAAT 55 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 99.4 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCCAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATCGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTGAACAATTACTCAACTATTATTATACTTATTTTTAAATTCATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CAGCTTGCAACGGTGATTGGAATGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //