Array 1 3463-2174 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZQO01000041.1 Limosilactobacillus reuteri strain E81 E81_contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3462 36 100.0 30 .................................... ACACCTAGTCGCCACAGAAATAAACAATAC 3396 36 100.0 30 .................................... TTTCTGGCAAGCTTGTCTGCTGATGAGTAG 3330 36 100.0 30 .................................... CTAAGAAGAATGCTAAGTTGGATAAGCAAC 3264 36 100.0 30 .................................... GACAAGACAAGACAGGTAGTAGATATACTT 3198 36 100.0 30 .................................... CGTGATATTACCATGTGTAATCGTATCTAA 3132 36 100.0 30 .................................... GCTATGGATTATGTATCACAAATTGATATT 3066 36 100.0 30 .................................... AACAGTATTTAGGGATGCTAGATCTCATAG 3000 36 100.0 30 .................................... AGTTTTGGGATATTACTACCGAAGAGGCGT 2934 36 100.0 30 .................................... CTGACTGCTTAGCTTCGTTGATAATCTTAC 2868 36 100.0 30 .................................... TAAACGTGAGGGAAAGAATGACTAATAAAG 2802 36 100.0 30 .................................... AAGCCCAGCCATTGCAAGAGCCTTAACGAT 2736 36 100.0 30 .................................... GGCACTGACCTTGAAAAGGCACAGGCGTTC 2670 36 100.0 29 .................................... TTAATTAAGAAAAAAGAGAACCCTTGGCA 2605 36 100.0 30 .................................... GACGCTCTACTGTGAGAGCGCCCTTGAGAT 2539 36 100.0 30 .................................... ATTATGGCCGATACTATTAAAAAGGAATCC 2473 36 100.0 30 .................................... TGATGAGTATGATTTTCCGTTAAATGCCAT 2407 36 100.0 30 .................................... TGAAAGAAACATTAACAGCACCGGTAAAAA 2341 36 100.0 30 .................................... ATCACCAAAGAATATAAAGGACACACTTGG 2275 36 100.0 30 .................................... TTGGTATTTTTGTTAATACGTTCAGCGGCT 2209 36 88.9 0 ...........G............G.......T..T | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.4 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TACACGTAAACTATAACAATCACAACGATGATATTTTTAGATATACTCCAACCTCGTTTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGATCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAATGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTGAAGAACAACTACAAGATGAATATTTTGCGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAGGCGGGAGCGCAGGTTGAAATCTTTAGTAATATCAAGGATTTGATTGCGGTGGCTGATTCGTTCCAAGGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //