Array 1 289444-289957 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905814.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 289444 29 100.0 32 ............................. AGCGCTGTGAGCCTGCATTCTCTAAATCGCCT 289505 29 100.0 32 ............................. GACCGCGATGATGTTGTCGATGCTCGACGCCG 289566 29 96.6 32 .........................C... CGGGACACCACCTCGGTAGCGGGCGGCGCTTG 289627 29 100.0 32 ............................. GATCGCAGGCCGCGCTTGGCGGGGTCGATGTC 289688 29 93.1 33 ..........................TT. GATCTCGAAGAAGGAGAACTTGTGACCTCATGC 289750 29 96.6 32 ............................G ATCTTCGAGGAGTACCAGCGCCCCGACCCATA 289811 29 100.0 32 ............................. ACCGTGGCCCCGCCGACATCCGCCGGGACGAT 289872 27 89.7 31 .............--......A....... CGGCCCGGTTCATCAAGAAAGGCAGGGATGC G [289898] 289931 27 82.8 0 ........G....-..-....A...C... | ========== ====== ====== ====== ============================= ================================= ================== 9 29 95.4 32 GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GACGAGCCGCGCACCGGCCGCCGCGGCCTCGGCAAGCGCGGCGGCGGCTTTGCGGGCGGTTGCGTCGGGGGCGAAGGCTATGGAGCCCAGTTGGGCTATGGCGGTTTTTGTCATTCCTGTACTTCCTTGCGTCGGGGGCGGGTTGGCGGTCTTGGGGCCGGGTTGCCACACGGCTCGGGGGCTGACGAGCGGTGGTGTGGGGTGCGCCCCACGGTGGGGGATGTGTGCGGCTGTGTCGATGCGTAAGTGGGCTGGGGCGTTGCCGGCGTGGTGGAGGCTCGGAGGTGGGCCGGCATTGCACGTGCCTGCCGCGGCCTCGGATGGGTGGCGTGGGTTCGTGGCTTCACGGTGCTGGCACTCGTATCGTTTTGGTGAACCATCCTGCACCAGTGGCTACTTGACACCGTGGGAGTGCAATGACTGCTTTGTACCAATGGTTCGATTCCGTAGAAGTGGTCGGAACCAGTCTCTTCGGCTGACAACACCGCAGCTCACGGAGG # Right flank : CGACGAGCCGACGCTGAAGCTGACGGCGGATGAGTGCTCCCCGCGCGCGGAGGAACGTACAGCGCGCACATGTCGCAGGCGGGAGTGCTGATGCGCGGAAAAGCGGACTTGGCTTTCTCAGCCGAGAGATGGTGCGTCGAACCAGTCCTTGCCACTCAGGCAGTAGTCGTACGTCCGGGCCGGCTGCGGTCTGGTCGTGTCGATCTCCTCCTGCGACTGGCGGCCTCCGGATAGCTGCCCTGCAACGGCCTTGCGTAGGGGACCCGTTGGACGCTCGCGGCGGAACCATCAAGGGCGGATACCGGACGCCGTCGCATGGGTGCCGGTGGTCCGGGTCGTCTGCCCGGCGATGCTGGAAGAGAAAATTCCGCTTCCCGTCGTCAACCCGGCGGCGCGGGAAGTGGAGACTCCGCTTCCGGCGGAATTCGCGGGGCCGAGACGGAGGGTGTATCTCGGCGCCCGGAGGCGGCCCGTTGCAGGCCGCGGAAGCGCAACCGGAA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 44247-43913 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905832.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00020.20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44246 29 100.0 32 ............................. CTGGCCATGGGCGTACCGCTCGCCCAGACCAG 44185 29 100.0 32 ............................. CAGCCCCGGGGGGCAGCTTCGTCGCCGCGCTC 44124 29 100.0 32 ............................. GCCGCCGCGGTCTGCCCCCGGCGCCGAGTGGA 44063 29 100.0 32 ............................. CAGTACAGCTCTCGGTACTCCGCCAGCGCCAT 44002 29 100.0 32 ............................. ACACCCACAACCCGCCCGTGGACCCCGTGGAG 43941 29 89.7 0 .....................A..AC... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GGCGGGCAAGGACGACCCAGAGAAGGTGAAGATCACCAAGAAGGTCCCGGTGGTCGGCTCCGTGACGGTGATCAGTTCGGCGACGATAAAGGACAAGCACACCGTCCGCCTCAACGCCGACGAGATAAAGGGCGAGGGCCCGCTCGGCATGGCCAAGGGCGTCCTCGACCGCCTCGTCCGCGACCGGATCGACGACGACTGGGACTTCGACGCCCTCCCCTCCGAACTCAAGCTGGAGGAGGCCCGCCCCACCGAGGAGGGCATCGTCGTGACCCTCAGCGGCAAGGACGTGAAGTTCACGGGGTAGGACGGTTGGTGGGCCGGGTCGGCTACTGCGTGAACTCTTCGTCGTCGGGGCAGAGTTGGTCGTGGCAGCGGGCTGGGTGAACTGCTTGCGCCGGGAGGAAGGTGGGCTTCTGTCCTCTGTGTGCATATTGCCGGATTCTGCGGAAGTTGCTTGGGATCGGCTTCCCGACCGATGAACGCGCAGGTCACGGAGG # Right flank : GCCCAGCAAGCACCCGACGTGAGCCGACCCAAACGGCGCCCCCTCGTTATCTTCTATGCGGTCCTGCAAGAGGGCTGCTGGCTTCCGGGCCCGGCATGGCTGTTCCCCCCTGTCGAACCGATGACCTGGGGGGTGGTGCCACCGGGCCCGAGAGGCGCCGTTGGAGACGCTGATGAGAGGTCCGACTACCGCCCCGCCGAGCGCAACGCCCGGCACTACGCGGGCGGCAGGTCTGCATAACGTGGATGCGCGCACGACGCCAACGCCCGGGCCAGCACCGCACGATCCCGTTCGGGAGGACGGCTTGAACGACCGCGACGAGATAGGCGTCTTCCTGGGCCTGGATGTCGGCAAGACGGCTCACCTCGGCCACGGGCTCACCCCGGCCGGCAAGAAGGTCTTCGACAAGCAACTGCCCAACACCGAACCGAAGCTGCGGGCCGTCTTCGACAAGCTCCGCGACAAGTTCGGCACTGTCCTGGTAATCGTGGACCAGCCCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 526337-526913 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905815.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 526337 28 96.4 33 .....................G...... TAGGCACGTCGTCATCCTCGGGGGTAGTAGGCG 526398 28 96.4 33 .....................G...... TGGAGATGAGCGCCGGTTCCGGCCGGTACGACA 526459 28 96.4 33 .....................G...... TGGAGATGAGCGCCGGTTCCGGCCGGTACGACA 526520 28 96.4 33 .....................G...... GGCGCGGATCGCCGCTGCCGCCACGGTCGGCGG 526581 28 100.0 33 ............................ GCTCGACGCCACGCGGCAGGGAGACGGGCTCCC 526642 28 100.0 33 ............................ GGTGTGGCCTGCGTCGAGGGGGATGCCGGGGTC 526703 28 100.0 33 ............................ GCGCCTCCCACGGCGGGATCTTCTCCAACTTCG 526764 28 100.0 33 ............................ GATTGACAGCGACCTGCGGCTGTCCCGGGCGGA 526825 28 96.4 33 ..........................T. CGGCCTGCGCACGGACCGCCTCCGCCCGCCGCC 526886 28 85.7 0 AA...............A....C..... | ========== ====== ====== ====== ============================ ================================= ================== 10 28 96.8 33 GTGGTCCCCGCGCATGCGGGGATGGTCC # Left flank : TCGCCGCCGCACGATGGCACTCCCTCACATCGCGCCAGTTCGCCGACCGGCTCGACGGCACGGGATGGGCGGGCAGGTCCGTGCTCACCTGCCCGCGAGTGTCGTGCGCGGAAGGATTGCCGGCTTGCGGCGGGCCGGAATCGGTCGGGTGAGTGCTGGTTGCGTGTTGGCCTACGGGCGGAGTGGCGCTATTGGTTACGTGCCGTACTTGCCGCGTTCTGCTGCCCGTTCGTGATCGATCTTCCCGAGGAGTTGCTCGTTCTCGTCGTCGGGGTTGCTGGTCGCCTTGGGGCTGTGCTCGCCGGGGTTGGGTGGGAGGGGTGCTGTGGTGATGCGGCACGGCTAACGGGAGTGCGCCGACGGTAAGTTGGGGTCGCGGATGTATGTGGGGTGGTGGGTGGGTCGGGGTGCGGCTGGGTGTGACTCGGTGATCTGTTAGAGGTGCGTGTGGAGTGAAGCAAAATTTGGTTACTCGCTCGTAGGAGTGCAGGTCGGGAAGT # Right flank : CAATTCTGGTAGGAATCCGAGCAGAAGGCATCCCCGCCCCGAGCCCGCGACCGCCCGTGTCGAACCGTCAACCCCAGCCGCTCACTTGACGCAATCCGACGGACAGCCCAAGTACCCGGGTGGACGCACCACGTGCGCAGCACCCCTCGTTCGGAAGGCTGCCGGACCGGCAGCAGCCGATGGATTCGCAGGCAGCCCCAGGGAACGTTGTCCTCCGCTTTCTGTTGCGCTCACCTGGCCACTCTCCCGCCGTCGGCGTCCCGTGCGGGGAGAGGGGCCGGCACGACGAAGCGGTGCGGCACACCTTTTACGACCTGGGGAGTACCAGGGTTGTCTCCCCGACCGCACCGAGATACCACCCGTCGACCCGCGGCTGCCCGCACCGCTCCCCTCAGCGCAACGCGTCTGCGGCACCGTGCGGCCACGTCATGGTTTCCCCGGATGCATCCCTGCTCCCTCTCCTCGGCGCTGCCCGAGTCAGGCGCCGGGTGCACACGGAA # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGATGGTCC # Alternate repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 560984-560627 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905815.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================== ================== 560983 29 93.1 32 ...A........................G ACGCTATGGGTGCACGAGTCGGCCGCGCTAGC 560922 29 96.6 32 ..........................G.. TCGGCCGCTATCTGCTCGATCTCGGCTACGTT 560861 29 96.6 32 ............................T CTTCTTCCACAGGGACTTGAAGAGCGCGGCAA 560800 29 96.6 32 .......T..................... GCAGGGCTACGGCGTGACGCTGAACGGGATAC 560739 29 100.0 54 ............................. CCGCGCGTGCGGGGATGGCCGTCCCACCAGGTCGCACAGTGCGGCGAGAGCGAC 560656 29 75.9 0 ...A.T....T......A....AC.G... | C [560632] ========== ====== ====== ====== ============================= ====================================================== ================== 6 29 93.1 37 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : TCCGCCACCGCCGACCGGTCTCGATCCGGTCCACCGGCCGCGAAGGACGGTGACCTTGCGCCGCCACGGGACGGTCGAGCAGATCCGCGCCCCTTCCCGCCGGCATCGCGCGCGTGGAGGAGCACGAGTCCGCGGCAGGCCGGACCGGGCGGCTGAGCGCTGGTTGCGCGTCGGCCCACGCACGGAGCGACACGACTGGCTGCCTGCCGTACTCGCCGCGCTCGACTGCCCGTTCGTCATTGACTGCCCCGACGCACTGCGCGACCTCGTCGCCGGGATTCGCTGGTCGCCTGGGGCCTGTGCTCGCCGGGTTGCGTGGCAGGGGTGATGTTGTGATGGGGCAAGGTCAACGAGGGTGTATGGGCGGTAGGTTGCGGGCCTGGATGTATGCGGGGGCGAGTCGGCGTGTGTGGCTGAGTGCGACTCGCTGATCTGTTGGGAGCGGGTGCGAGGTGAAGCAGAATTCGGTTACTGGCTCGTAGGAGTGCAGGTCGGGAAGT # Right flank : AATTCCCGTAGGAAACCGAGCAGAAGGCGCCCCGCCCCGAGCCCGCACCCAGCGCTGTCGAACCGTCAACCCCAGCCGCTCACTTGACGCAATCCGACGGACAGCCCGAGTATCCGGGTGGACGCACCACGTGCGCGGAACCCCTCGTTCGGAAGGCTGTCGGACCGGCAGCAGCCGATGGATTCGCTGGCGGGGTGAGGGAACGTTGTCCTCCGCTTTCTGTTGCGCTCACCTGGGCACTCTCCCGCCGTCGGCGTCCCGTGCGGGGAGAGGGGCTGGCACGATGGAGCGGTGCAGTACACCTTTCGCGTCCTGGGGAGTACCAGGGTTCATCGCCCCGACGGCACCGAGATGCCGCTCGGTGGTGCGCGGCTGCGTGCACTGCTCACCGTGCTCGCGGTGGCCGGCGGGCGAGCGGTGCGTACGGGGGAGCTCGTGGCGGAGGTCTGGGGCGCGGGGGAGGACCCGCCTGCTGATGCTCCGGCCGCGGTGCAGGCGCT # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 389416-390054 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905819.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00007.7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 389416 30 100.0 31 .............................. GGGGCCAATCACGCTGGATGAGGAGGACGTG 389477 30 100.0 31 .............................. AACAAAGCCACCGCATCGAGCCCGAGACCGA 389538 30 96.7 31 .............................C AGGCGCGGGCGGAGGCCCATCCGTGGTCGTG 389599 30 96.7 31 ............................A. CCGGGGACGGGGTGCTCTGCGAAGGGTGGAG 389660 30 100.0 31 .............................. CTGCCCGTCACGCTGGTCAGCGCCTTGGGGA 389721 30 96.7 31 ..........................G... CACCGACAATGCCGAGTGTGATGCCGAGGCA 389782 30 100.0 31 .............................. GGACTCGCGCGGGGACCTGGCGCTCAACCGT 389843 30 96.7 31 .............................C GAGTTCGACGCATACTCATACGCTTGTGCTG 389904 30 96.7 31 .............................A GGGCTTGCGGCGGGTGCTTGCTGTAGTGGCG 389965 30 100.0 31 .............................. CCGCCGTACGACTCGGCGAGGCGGCCTTCCA 390026 29 93.3 0 .................-...........C | ========== ====== ====== ====== ============================== =============================== ================== 11 30 97.9 31 CTGCTTCCCGCGCACGCGGGGATGGACCCG # Left flank : GCAGGCGAAGGCCGGTGTCGCCTTGCCGACGTCGTGCACCGTCGCCAGCCACACGGTCAGCAGCCGTGCCTGCTCCTCCCCGCCCGGCAGGGCTTCGGCCACCAACTGCCGTACCTGCCGCGGCAACCAGCGGTCCCACAGCAGGCCTGCGACCGCACCGCTGTCCGCCATGTGCCGCCACAGCGGCAGCCACGCACCGCTCCTGCCGCCGTCGCGCTGGTCGGACTTCGCCCACACCTTTCGGGCCGGGAGCGACAGGGTTTCGCCCAGATGCGGCGGAGGCGGGGGTGTGGCGGGCATGCGGAGGATTAGATCCTGTGATGGGGGGTGGTGTCAGGGTGTTGAATGAATTTGAGCGGTAAGTTCTTTTGTTTGTCAGGGGGTTGGGGTGGGTGATCGGGGGCGGGGGTGCTTCGGCTGGGAGGGTGGGGGGAATGTCTGGATTCCCGGAAGTTGCTTGGGGAGGGCTTGCCTTGGGATAGAAGCGCAGGTGGGGGAGA # Right flank : CAGATCGCCGCGACGCTCAACGCCGGCGGTGACTGCTCCCCGCGCCCGAGTGCCACCCCCGTCCTCCGCACGGTTCTCGACACACCACAGCCCCGCTCGCTCCCGGGACCCCGACGCTCCGCGAGGCACCCGAATTCACACCCCCTGCACACCCCTCTCTAAGAAAGCTCTCAGAGCCGCCGCCCACAATCGGCCGCATGTCCTCCCTCTCCCTCCCCCAGCCGGCCCATGCACCCTCCGCCGAGCTTGCGGGGACGTCTCGTGGGAACGGGGCACCGGTGCGGGTGCTCGTCGTGGATGATGAGCCGTCGCTCGCGGAGTTGTTGGGGATGGCGCTGCGGTACGAGGGGTGGGAGGTGCGGACGGCCGGGGACGGGGGGAACTCGGTGCGGTGCGTGCGGGGTTGGTGGCCGGATGTGGTGGTGCTGGATGTGATGTTGCCGGATGTGGACGGCATCACTCTGCTGGGGCGGCTGCGTCGGGAGGTGCCGCGGGTGCCG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTTCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 262804-263014 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905820.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00008.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 262804 29 100.0 32 ............................. GCGCGCTCGTCGAGGGCGTCGACCTCGCGCGG 262865 29 100.0 32 ............................. GTGACGCGGACCTCAATGCCGACGAGGTGACT 262926 28 96.6 32 .....................-....... CAGGTGAGGCCCACCGTGTCGCTCCCATCCCG 262986 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGGTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : CCGCGCCTGCGCGCCTGCTCGGTGACGACCAGCCAGTCGATGTGCGCCGGTCGGCCGGGACCGAAGAGCACTCCGCCCAGGAGCTGTTGCGCCCCCGGCCGGACGAGCGCGGTGCCGCGGACGAGGTGCCTGCCCAGCGCCCGCCGGAAGCCGGGCACTTCGACCATGGGACCGAACCACTGCTCGACCTCGGCCGCGAGGCGCAGCAGCCCGTCGGTGTCCTCTTCCGTCGCCGTGCGCACGCCCGCCATCCATGCGATTCTGCCAGCATCCCGCGCTCGCAACCCGGCGCCTAGCGCCCGCAACAGGGCGCGCTTCCGGCGGAGTTGTGAGACGGCACGGCTTACGGGGTGCGCCGGCGGTAAGTCGGGATTGCGGAGGTATGCGGGGTGGTGGGCGGGTTCGGAGGTGCGGCTGAGTGGGACTCGGTGGTCTGTTGGGGCGGGTGCGCGGTGAAGCAAATTGCGGTTACTCGCTCGTAGGAGTGCAGGTCGGGAAGT # Right flank : GGTCGAGGTTGAGGGTGTGCTGAGGAGGAACAACTTTCGACGGGTGTGGGTTCCTGCCATCCAAGAGGCCGACATCGCGCGTGAGGTGAAGAACCCCGAGACCGGCCGCAAGGAGTGGTGGCCGAGGGGCTCGGATTACCGGGACGTGTACGCCTCGCGGTTGTACGCGCAAGGGTTGTCCGAGGCCGAGGTGCAGTGCATCCTCGGAACGACCGCGGCGGCAAGGTCACGTGGCTGTACACCCACCGCGGCGAGGTAGTTGTCGGGAACGCCCGCGAGGCACTCGCCGGTGGCCGCCACCTGCGAGCCGTCTCATGAGGCCGGGAATGGACAAAGTTCACATGGAATCCACAACCCCCCCTCGGCGTCCCTCGCTGCCCTCTTTTTCTCTCGGTAAGAGCAGATGTTGATCAAGAGGGCTGCCGCTGACCAGCACTCGGAACGCCTCGGAGTGGCTCGGCGAAACTTGCCGGGCGGTGCATCTGTCTTTGCAGGGCAGA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 165545-164413 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905817.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00005.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 165544 30 100.0 31 .............................. GCGGGTCGAACGCCTCGGCTACGAGCATGAC 165483 30 100.0 31 .............................. ACCGGGACCTTGTACACACCGCCCGTCACGT 165422 30 100.0 31 .............................. CCTCGACGCCGCACCCTGCCCCCAACTCACC 165361 30 96.7 31 .............................C GCTTGAGCGAGGCGGGCGGCACGAGCGCGTA 165300 30 96.7 31 .............................A GGTCCCGCAGCACGCGCTCTTGGCGCTCTAG 165239 30 96.7 31 .............................A TCCCGAGCCCCTTCCGGTCGCCCCGCCCTGT 165178 30 96.7 31 .............................C AGGGGCACGGGCACACGGGCGGACAGCCCGA 165117 30 96.7 31 .............................A AGGACGACTACGTCCTCGCCGGCCACACCGG 165056 30 96.7 31 .............................G TCCGCTTGGACGTTGCACCCACGGCGGCGTG 164995 30 96.7 31 .............................C ACGTCCCGACAAGGACTTCAGCAACCCTCAC 164934 30 100.0 32 .............................. CAACGGCGGAAGTCTGGCCGGTAACCTCTGCA 164872 30 96.7 31 .............................A CGTCCATCACGGCCAGGTCGAGCGCGCCGGT 164811 30 100.0 31 .............................. CGTGATGACGACCGCCGGCGGCGGATTTGAT 164750 30 96.7 31 .............................A CGATGCGCTTGTTCCTGCCGACGATGTCCGC 164689 30 100.0 31 .............................. CCTCAAGGACGAGGCCGACCCCGAGCTGGCC 164628 30 96.7 31 .............................A GGAGCAGGCCGCCCTCACCCCCAGCCGCGAC 164567 30 96.7 31 .............................G CCTCCCCGGAGTCGATCTGGAGCCTGATCGA 164506 30 100.0 31 .............................. CGGACTCGGCTCCCTTCAGGTCGCCAAGGCC 164445 30 90.0 0 .....................C...C...C | TC,T [164422,164427] ========== ====== ====== ====== ============================== ================================ ================== 19 30 97.6 31 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : GGTGCTCGTCATCATCTGGTGGGACGCCGCTTACGACGCGGAGTTGCCGGAGATACCTGAGCCGCCGGGGGAGTTGGTGGCGCGGGGGGTGCATCGGTGGCGGTTTGAGCGGGTTTGACGGGGTGGGGGTTGGTCAGGGCGTGCGGGGTGTGTTCACTGAGTGGGTGCCTCGGTGCTCCTTGGGGATGCCTTCGCTTCGAACGCCTTGCTTGCGTCTGGGAGTTGCGTGGCCGGGCGACTCGCGTCGGCTAGGAGGCTGTCGCCGAACGGCGGGCGTGATCGGGGGGCTTGCTCGCTCACAGCGCCCTGTCGCCTTCGTCTGCGCGGTGTTGACCGGTCAGAGGTGCGAGGTCGGCAGGCGGGGCATGACACCGGGCAACCGGGGGAGTAGTCCTTGCTGCAAGGCCAGTTGACCGTCAGGGTGGGAGTCCAATTTGTCGCTTTCGAAGAAAGTTGCTTCCCAGGGCCAGAGCCCCGGATAAACATGCAGGTCAACGAGA # Right flank : TGACTCGGTGCCGTACTCGGCCAAAACCCCCTACCCCACGCGTGCTTGACGAGCGTCCCCCGCCACCCCCATCAAAAGACCAACCCGCCGCCCCCCAAGGGCAGTTCAGCCTCCCCCCGCCAGCAACCGACTCCCTGACGGCAGTCCGATCCCGAACTTCTCGTCGAGGACGCGTACCGCCTCCGCCCCGTCGGCGACGGGGCGTTCGTGCCGCGTCCCGTCGGTGAGGGATTCGGTGAGGGTGAGGGTGGTGCGTCCGGAGAGTTTGCGGTGGGCGCCGCCCGGGAGGGTGCGGACGATCCAGGGGGTCTGGGAGAACGGGGAGCGTGGGTTGGTGGCGATCTGCCAGTTGGCGACGTCGAAGTCGGGGGCCTCGAAAGGCTCGACGGTGAAGCCGTAGAGGCGGTTCCAGCCCTGCGGCGTGAGGGAGTGCAGCTCCCAGTCGGCGAGCGGGCGGTCGGGGGCGTGCTCGCGTAGCAGGCGGACCCGGTGGCCGCCCT # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 320636-320013 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905817.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00005.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================================================== ================== 320635 30 100.0 31 .............................. CGGGCCACCTCATCCACAGCGACGACCCGAT 320574 30 96.7 31 .............................A AGCGGCCGGCGCACAGCGAGTCCACCGAGGA 320513 30 96.7 31 .............................G AACTGATCGGGTTCGGCCGCATCGCTACTGA 320452 30 100.0 31 .............................. CCGAGAATCGCGCCCAGGAAGTCGCCGCGAT 320391 30 100.0 31 .............................. ACCACCTCGAAGCGGACTTCATCGAGGACAT 320330 30 93.3 31 ........................A....G GGCTCCTGGTGACCGATTACAAGATGTCGGG 320269 28 90.0 27 ........-...........-........G ATGCGGAAAGCACTGCGACCGCTATGC 320214 30 93.3 142 .............A...............A GGGCGCCAACCGGCATCTGCCCGTGGCGGGGCTGCTCCCCTGATCACGCCCGCCTCAACGGCTCCGGGCCGTTTCTCCCCCCCATTCGCGGGGACTTCGCGAGTGCTCCCTGCACACCGCCCTAGCCACCCCCATAGGTATG 320042 30 70.0 0 .............AC......GC..CGGTG | ========== ====== ====== ====== ============================== ============================================================================================================================================== ================== 9 30 93.3 44 CTGCTCCCCGCGCGTGCGGGGATGGTCCCT # Left flank : CGTGGCGGTGTAGCTCAGTCGGTAGAGCAAGCGGCTCATAATCGCTGTGTCACCGGTTCAAGTCCGGTCACCGCTACTTCACCGACAGTAGCCGATTGCAGGGTCGGTCCTCCGATCGGCTACTATTTCTGCGTTTGTCCATCCGTTTGTCAAGGAGCACTCAACGTGGCTGCCACAGACGTCCGCCCGAAGATCACGCTGGCCTGCGTGGAGTGCAAGGAGCGGAACTACATCACCAAGAAGAACCGTCGGAACAACCCCGACCGGATCGAGATGAAGAAGTACTGCCCCAGGGACAACCGTCACACCGTCCACCGCGAGACGCGCTGACGTCCGCGTTCCGAGGGCCGGAAGTTCTTCCGCGAGGCCGCTCCCTGTGTCGTCAGGGGGCGGCTTTGTCGTGTGTGCGCTTGGCTGCCGTGACGGTGTCCGATTTGTCACGCTCGGGACAAGTTGCTTCAGTGGGGGTCGGCCGCTGAGAAACGTGCAGGTCAACGAGC # Right flank : GTGCATCCCGCGGCGCCGCAGCAACCCCCCCCCGTCGAGCAGACGAGGCGCGAGGCACCGAAGCAGCAGGAGGTGGCGCCGATGGCGCTCGACAAGTCCTTCGAGGGGCGGAGCTATCCGCCGGGGCGTACGTACGAGGTCGGCAGGGAGAAGATCCGGGAGTTCGCCGAGGCGATCGGGGACGCCAATCCGGCCTACACCGACCCGGAGGTCGCGCGGGCTCTCGGGTACGCGGACGTGATCGCGCCGCCCACCTTCGTCTTCTCGCTGACGTTCCGGGAGGCGGGGCAGGCGCTCCAGGACCCGACGCTCCAGCTCGACTACGGACGGGTCGTCCACGGCGACCAGAAGTTCCACTACCACCGGCCGGTGCTCGCGGGCGATCGCCTCTCGGTCACCTCGACGATCGACTCGATCAAGTCCATGTCCGGGAACGACATCCTCGACATCCGCGGGGACGTGTACGACAGCGCGGGCGAGCCCGTGGTGACCGCCGTCAC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 326422-326148 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905817.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00005.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 326421 30 100.0 31 .............................. TTGCGAACGGCGTTGTCTTGGTCACTGGGCG 326360 30 100.0 31 .............................. AAGCTTCGGCGAGATGAAAAGGAAGCGGGAA 326299 30 100.0 31 .............................. TCTTCACGGCTGCCTCGGTCTTCTTCGGGTG 326238 30 96.7 31 .........A.................... CCCGCCGCATCAAAACGTTGGGCGACCTGGA 326177 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 5 30 99.3 31 CTGCTCCCCGCGTGCGCGGGGATGGACCCG # Left flank : GAGTGTGCAGAACGGGAGTATCGATCAGGTGGGGGAGCGGGTGATGAGGATCGTTGAGGGGATTGTGGATCGGCGGCGGTCGGTCGTATCGAATACGTCTGTCGGTTGACGGTGTCGCGGTCCGACGAATTCGCCGGTGCGGGTGAGTTGTTGGGGTGGGAGCGAGGGGTCGTGCTGTGTGTGCCTCTGTGCTCGATGGGAGCGACTGGTGCCTGTTGGGTTGTTGGGAGAGGCGCCGATCGTCAAGCTGCGGAGCTGTGCTTGAACCTGCCATATTCTGGCGGCAGTTGAAGGCTCGATGCTCGCCGGTGCCGTCCCGGGACGGCACCGGCGGGAGTAGCTGTCAGCCGGAGGAGGAGCCTGGGCGACTGTGCTGCTACGGACGCAAGTCCCTTACGGCAACTGTGGAGTTGCCCGGCCGAAGGGTGCCTTATTTGTCGCTTTCGGAGAAAGTTGCTTCAACGGGGGTCAGCGGCCGATAAACGCGCAGGTCAACGAGA # Right flank : TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCGCATCAAAACGTTGGGCGACCTGGACTGCTCCCCGCGTGCGCGGGGATGGACCCGTCCTCCGGCCGGGCCATCGGGTCCGGCCGGGCTGCTCCCCGCATGCGCGGGGATGGACCCGAGGGGACCCTCTTCGGCGCCATCCGGAAGGACCTGCTCCCCGCATGCGCGGGGATGGACCCCACAAGCCGAAGTTCCGGGGGCAGGACGAGGGCTGCTCCCCGCGCACGCGGCGATGGACCCAGCGCCGGCAACGTGCTCGTCGGAATCTTCTGCTGCCCCCCGCACACGCGGCATTGGTCCCCATGGACAAGGGCCAGCTCGTTGACGACGTCCGGCTCCCCACGCATGCAGGGACATCCGGCGTCCTCTCAACTTGCCTTCAGGGAAGGCATGT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTGCGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGTGCGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 329933-329170 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905817.1 Streptomyces sulphureus DSM 40104 F603DRAFT_scaffold00005.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 329932 30 96.7 31 .............................G GCGGCGGCCTTCCCCACCCACCCCGGCCCGC 329871 30 96.7 31 .............................G CCTCGAAGGTGATCGGCTCACGGCCGCGGTA 329810 30 100.0 32 .............................. CCGACGACCTCACCCACGCCGAACAGCAGGCC 329748 30 96.7 31 .............................G CGGCGGCACACCCGCCGACCGCCTCCTGGCC 329687 30 100.0 31 .............................. GGGCTGCGGTCTGAACTTCCTGGTGATCGTT 329626 30 96.7 31 .............................A CCGCCTACCGGCCGGTGCAGCAGGCCACGGC 329565 30 96.7 31 .............................T CATCTGGGAAGACGCCGCGGCCGACCTCGGA 329504 30 100.0 31 .............................. CGGTCTCCCGAGGGCACCCTTGGAAGGCCGC 329443 30 96.7 31 .............................T CATCTGGGAAGACGCCGCGGCCGACCTCGGA 329382 30 100.0 31 .............................. CGGTCTCCCGAGGGCACCCTTGGAAGGCCGC 329321 30 96.7 31 .............................G CATTCGCAGACATCAGCCGCGACTACTGGGA 329260 30 100.0 31 .............................. GGCAGATCCATGCCGACGAGCCGCTCCAAAA G [329239] 329198 29 86.7 0 .............A.......-.C.C.... | ========== ====== ====== ====== ============================== ================================ ================== 13 30 97.2 31 CTGCTCCCCGCGCGTGCGGGGATGGACCCC # Left flank : TCCTGGGCTCAGCGCACGTTGAGGAACCTGCCTCTCGTGCCGCGGAGTCCACGAATGCCATAGCCCTCAGCCCATCGTTCAGGCATCACCCCGGAAGCTGTGCCTCGCCGCTCTCAGGAATCTGCACCTCCGCCTCGAGCTGCGACAAACACACCGACCACCTCGACCCCTGGGCCGCGCGGCCTTTCTCATCGCACCTGGCGGTACAGCCCGCGACCGGGGCCGAGCACGATCTGCCTTCAGCATCCGAGGAGCACGACACCTCCTCTGACTCGTAGTGTTGGCCAGGGTGCTTCCGGTGTGGGCCGTCGTGAGGCCCGCGAACACGACGATTCCACGACTCGCGTCCGGGGGTTGAGTCGTCGAGCTACCGACCAGCACCGTGAACGAGGCCGCCCGCGGCGGGTCGGCCACCACGGAGAGGGGTGCCTTATTTGTCGCTTTCGGAGAAAGTTGCTTCAACGGGGGTAAGCGGCCGATAAACACGCAGGTCATCGAGA # Right flank : GAGAACGCCCGCCCGAAATGCGTCCGCACTGCGCCTCCCCGGCCGAGTGAAAGATCCGGCACCCGCCCAGTTTCCGCGGCAGCGGGAGTTCCATGTCGGGATGACCGGGCCGGCCACGACTCGTCAACTAACGCGCCACCGAGCCCCGTTACCCAGTCGCCACCACTCCTCCCGCACAATTCCCCGCCCACACCCCAGGCGTCCTCCCCCACCACGGAAGTGCCCGTTCCAGTTGACCGGCGAGTCGGAAGAGGCGGTCCTCGGACCCGTAATCGGTGGCGAACTGCATGCCGATCGGGAGTCCGGTCGCGTCGTCGGTCGTGAGGGGGACGGACATGGCGGGTGTGCCCGCCACGTTGAACGCCGCGCTGAACGGTGCATGGTCGAAGACGCGGCGGAGCCAGCCGTGGCCGTCGAGTTCCGCTGCGTTCTCGGTGTGGGTTCCCAGGGGTACGGGGAGTTCGGGCAGGGTCGGGGTGAGCAGGATGTCGTGGTCGGTG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //