Array 1 923141-922773 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZIJ010000001.1 Paenibacillus oenotherae strain DT7-4 NODE_1_length_1001481_cov_19.8612_ID_772, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 923140 32 96.9 35 ...........T.................... CATTTTTCTACCTTTGTGCTCGACGTAGGGGTTGG 923073 32 96.9 33 ...........T.................... TCCTATAGTCAAAAGACTTGTTCCATTTTTAAA 923008 32 100.0 36 ................................ CGGAATGATCAATTCGGCTGGCAGAAGCTCATGGAC 922940 32 100.0 36 ................................ GGTGCATGGTAGCTAAAGTTGTTCTCGATTACAGCA 922872 32 96.9 36 ............A................... TGGTTGCAGGAAGAAAGGGATCTAGAGGTCTCTTCG 922804 32 93.8 0 ...........AA................... | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 97.4 35 GTCACTCCCTGCGCGGGAGTGTGGATTGAAAT # Left flank : ATATACCAAAGCGGAATTTGATCATTATATCCATATTCCGCTGCTGTGAGCCGACAAATGTCGGCTTTTTTATATTGCCAATTTAATCGACTAAGCTGGGGTGGTTGCTGAGGTGTTGCTGAGAAGGAGTTGGGTCAGAGGAGGTCGTCTCCTGGCTCTTCAAAATTGTGATTGTAACTACTTTGCGGGTGGGATCCATGCGGATGATTGACAAAATAGTCGTCGAGGACTACTCTGGATTGGTAGTGGTCTTACAATTATTTACTATATGACCGAGGTTGATATGTAGCAATTGTGGAATCGATGGCTTTGGATGGCTGATTCATTCTGCTGGTGCGAATGTGAAGCTCACATGAAATCCCTGGGGGTTTCGCACCTTGTGCCCGGCGCGGGTTTTGGGGGATTTTGTGCATAAATATTTCCATTTTAAACGCTTGAAAATGAGATTCGCACTAAAATGCTTTCAAAACCTTGCCAGACATGGGCTCAAAACGCCCACT # Right flank : CTCGCAGTAGATACGATCGCGCCGTTGATAGGTAAGCGTCAAACCTACCCCACCTTCAAAGTCCAATCCCCACATGAGAAAATGAGGGCACCCCAATACAGGAGGCTGCCTCATGACTACCAAAGAACAACGTCTTCACGAATGGATTGCGCGCATCGCGGATTATAGGAACAGTGGCCTTACGATGTCGGCATGGTGTACATCCAATCACTTCACCAAAGAAAAACTGAGATATTGGCTCCGTAAAACGAAAGCAGCTTCTTCCACAGCCGCACTAACTCCGCCTACTCACTGGGTACCGCTTGCGGTTGCTGATCAAACCGAATCTCCAAACTCAGCACCTTCACTTGTTGTTTGCGTCGGACAAGCCAGTATTGAGCTTCGAACAGGCTTCGACGCTCGACTCCTTCGTGAAATCGTGCAGGCATTGGAAGCGCTATGCTAACGCTATCTAACACTCAGCGTGTTTATCTCGCTTGTGGATCGACGGATTTGCGCAA # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTGCGCGGGAGTGTGGATTGAAAT # Alternate repeat : GTCACTCCCTGTGCGGGAGTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCGCTACGCGCGAGTGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 955699-954547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZIJ010000001.1 Paenibacillus oenotherae strain DT7-4 NODE_1_length_1001481_cov_19.8612_ID_772, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 955698 32 100.0 33 ................................ CATTTATTATCGCTTGTCTACTCATAGCGACAG 955633 32 100.0 33 ................................ TCTCCAAGACCTGTACTGGATATACGCAAAGTC 955568 32 100.0 35 ................................ TCTCAAAAACAATCTGAGAAGGAGATTTTAAAATG 955501 32 100.0 33 ................................ TCCACTATTCGCAATTTATTGTCATGTAGGGGT 955436 32 100.0 35 ................................ TCCTTAAACACCCGCCGGAACGTCTGCTGCTTGCC 955369 32 100.0 34 ................................ CACTGCTCGTTAAGCACACGGGTTTGGTTAGCCC 955303 32 100.0 35 ................................ CGAAACAGGAAGAGTATTGCTTACCAAATGAAAAT 955236 32 100.0 33 ................................ CTAAAGCGATGTATGTAATCATTTCCACTTTAT 955171 32 100.0 35 ................................ GGGAGTGATACGTGAATTATCAATGGACGATCACG 955104 32 100.0 34 ................................ TATTACTATCAAAATCGATACGCAATATACGATC 955038 32 100.0 34 ................................ GCGGTTGGTAGAGTCCGAACGGGAACGAGATGAA 954972 32 100.0 34 ................................ TGTCCGTAGAGGGATTGTAAGTCCTCTAGGCGCT 954906 32 100.0 34 ................................ ACGATCACCAGCACGATAGCGGCCACGGCCAGCA 954840 32 100.0 34 ................................ TCCATCGTGACTTCGAATGCAAGCAGATAATCGC 954774 32 100.0 33 ................................ CTTGAACCGTTGTTTTATAAAATAGTCATGCCT 954709 32 100.0 33 ................................ TCTGCAGGATTACAGCGCCGCATACGCAACACG 954644 32 100.0 33 ................................ TCTGGACTGGATAGAGGCGTGGGATTTGATAGG C [954623] 954578 32 71.9 0 ............A.....ACC....G..CTTG | ========== ====== ====== ====== ================================ =================================== ================== 18 32 98.4 34 GTCACTCCCTACGCGGGAGTGTGGATTGAAAT # Left flank : TAGATATAATGATGGTGAGTTGAAAAGGGTAGATGTGGAGTGACACTGCCTATGCTTACGGGGCTCTGGCGGCATGAGAGAGGAACTCTCTGGAATGGTAGTGGCAAAAACTATCTCATGGCGGTGGTGCCTCTATTTTACAAAAGAGCGGTTCATTTTTTGTGAAAACACTATGAAAGCTCCCTGCATTCTTCGATAGCTGACTCTGTGGATCATTGACAAAATTGTCGGCGAGGAATATTCTGAATGGGCAACGGTTTTTACATTTATCCCCATATGTATAAGTTGAACTTGCTGTAGTGGCATGGATCGTTTGAATGGCTCATTCTGCTGGTGCGAATGTGAAGCTCACATGAAATCCCTGGGGGTTTCGCACCTCGCTGCTGGCGCGGGTTTCGGGGATTTTGTAAACATATTTTATCAATTTTAAGTGTTCAAAAATGTGATTCGCACTAAAGCGCTTTCAAAGCCTTGCCAGACAAGGGCTCAAAACGCCCGCT # Right flank : TTACCCTTGCTTCTTCCTGGCGGCCTCGTTACGGGCAGAATAACGGCGTAAATGGGGATTTTTGAAGGACAATCTGCTTATACCTGGGAGGTATGAAAATGAAGGTCAAACGAATCGTCGCCAATATAAATACGAATGATCTCATGGCAGCAAAATGCTTCTACCAGGATGTGCTTGGCCTTGATTTAATGATGGATCATGGCTGGATTAGAACTTATGGTTTAAACGAGGAGATGGGCATTCAAATTAGTTTCGCCTCACAGGGTGGCTCAGAAACGCCTACGCCTGATCTATCGATTGAAGTCGATGATGTCGATACTGCATTAGAAGGCATGAAGAAAGCTGGATTTCCGATAGAATATGGGCCAGTTGATGAGCCTTGGGGAGTTCGACGATTCTATGTCCGCGATCCGTTCGGCAAGCTTATCAACATTCTTGCTCATGAACATGGAAACACGAACGGCCAATCGTAAAAAGACGCAGGTTTGTTCAACTATCGA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCGCTACGCGCGAGTGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //