Array 1 930782-929685 **** Predicted by CRISPRDetect 2.4 *** >NC_018178.1 Melioribacter roseus P3M-2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 930781 30 100.0 37 .............................. TATAGTATTGAAAATGATTTATTTTTAGTTGAAGAAA 930714 30 100.0 38 .............................. GAGTAGCCTGGCTCATGTACATATTGTCCCATGCGAGC 930646 30 100.0 36 .............................. AATAATTTCCGGGAACCAGCGGAGCAAAATTTTTGA 930580 30 100.0 37 .............................. AGGAATTAATAAATGAATTAACAATCTTCATTAAAAA 930513 30 100.0 36 .............................. CATACTCGACTCGATTCAGAAAAAAGGCGGCGGCGT 930447 30 100.0 37 .............................. ATTTTAATAGTTTTTCTTTTGTAGTTTCGTTAATAAT 930380 30 100.0 37 .............................. TGAGAGACGAAGTAGAAGAAGCAGAGAGAAGTTACGA 930313 30 100.0 38 .............................. GCGAATTCAGTTGCAGATTCCTGGCCGTTAAAGAAGAA 930245 30 100.0 37 .............................. TAACTTCTATATCTCCATACCACAACCGGCGATTGCC 930178 30 100.0 36 .............................. TAATCTTCGAGTATAGTGCAATATCCGTAAGTGGTC 930112 30 100.0 38 .............................. TGCCTCTAATGGCACCCAAAATACCGTTGTTAATTCGT 930044 30 100.0 36 .............................. GATATATTTGATAATCGGCGGCGTTAGGGTCGAGCA 929978 30 100.0 37 .............................. ATTTGCAAGGGATGTGGAGGGAGCGGATAAAAAGCGA 929911 30 100.0 35 .............................. CTCTATGTATTCAATAAGAACGTCTTCAGGGTAGG 929846 30 100.0 36 .............................. TATGTGTGCCGTATGACTGCAAGAATCATCTTCAAT 929780 30 100.0 36 .............................. GCTTTTCTAATTACCTTGCCGTTGCGATCCTTTACA 929714 30 86.7 0 ..........................CCCC | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 99.2 37 GTCTTAATCGTACTATTGTAGAATTGAAAT # Left flank : GGCATTTGATAAGACTGGAATGTTATAAGTTAATTAAACATATTATAGGCGAAAAAGAATATAAACCGTTTACAATCTGGTGGTAAAATGTATGTAATTGTGGTTTACGACGCGGCGCCGAAAAGAGGCGTAAAGTTGATGAAGTTTTTACGACAGCATTTGAACTGGGTTCAGAATTCCGTTTTCGAGGGCGAACTAACCGAGAGCGGATTTGAAAACCTGAAACACGGTATAAAAGATATAATAAACGACAAGAAAGACAGCGTAATTTATTACCGGTTCGATTCGCAAAACTATCACGACAGGGGAATAATAGGCGTGGAGAAAAATGAAATCGATTCGTTTATATAAAACGGTCGGACGCTATAAAAATGACGGGCTGATTAAGCTCGAATGCAAAAAAGTCGTCGACCCCCCGGGATTTTTGCACTATCGGAGGTCGACGACGCAAAGTGAAAAAAATACTTGCAAAACAGGCTGAAAATTATGAAATTTAGCGG # Right flank : GCTTACAGCGGGGTCTCCGTTCGTCCGTCAGTCGACGGACTCACTCCGAAAATAGAGTCCGACGAACTAGCCGGAAGGCTAGAGAGTCGTCCCGCAGAATGCGGGATTAATCGTACCCGACGCCGACGGGTAGAATTGCTTAGCATGGACGCTGAGCTTGTCGAAGCGTTACCGTTCACCCTCAGGGACGGGTTCGCTTCGAAAATAGAGTCCGGCGAACTAGCCGATAGGCTAGAGAGCCGTCCCGCAGAATGCGGGATTAATCGTACCCGACACGTCAGGTAGAATTGCCCCGCTTACAGCGGGGTCTCCGTTCGTCCGTCAGTCGACGGGCTCACTCCGAAAATCCGATGTTACAAAATTGGTTTGCGATATTTGTATTAATCATGCCCGACTCCGACGGGTAGAATTGCTTAGCATGGACGCTGAGCTTGTCGAAGCGTTACCGTTCACCCTCAGGGACGGGTTCGCTTCGAAAATAGAGTCCGGCGAACTAGCCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCGTACTATTGTAGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 1356549-1354991 **** Predicted by CRISPRDetect 2.4 *** >NC_018178.1 Melioribacter roseus P3M-2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1356548 46 100.0 30 .............................................. TAACGTTTGCATTCCATTTATGGGGGTAAA 1356472 46 100.0 29 .............................................. AAACCGTTTGCAAATCCTATTGAAGAGCT 1356397 46 100.0 30 .............................................. CTACCAAGCCATCATTAACAGCGTCGAATA 1356321 46 100.0 30 .............................................. ATCAGGATAATCTGCCATTTATTTCGCTAA 1356245 46 100.0 30 .............................................. TAATAGGAGATTCAGTAGAAAAAGAAATTA 1356169 46 100.0 30 .............................................. GAAGTCCCGTTGGGGTCTGTTTGGGGCGGG 1356093 46 100.0 29 .............................................. TGCCTTGACAGTCGCCCACCCCTTCTCTC 1356018 46 100.0 30 .............................................. GATGCGCTCCGCTTTGCCTCTGCGGGAGTC 1355942 46 100.0 30 .............................................. CGGCGTTTCCGTCGTTTCCGCTGTCTCTAT 1355866 46 100.0 30 .............................................. ACCATTTATAGACCTCGTCTGCCCAATTCT 1355790 46 100.0 30 .............................................. ATGCCATCACCGTTGTTGTGCGGCAATGGA 1355714 46 100.0 30 .............................................. GTTGCAAAGGCGATGAAGCTCGACATCCTG 1355638 46 100.0 30 .............................................. AGAATCGACGGAGGAGTTAAAATTGCTTAC 1355562 46 100.0 29 .............................................. ACCTTCGCTGAGTTTGTCCCTGCCTACCT 1355487 46 100.0 29 .............................................. GCTGTTCTTCTGCCCTATCCTGTGTACTC 1355412 46 100.0 29 .............................................. TAGCTCCCCTTTATTTTATATTACCGTTT 1355337 46 100.0 30 .............................................. TCCTCTTTTGCGCAACTCATGATAGAGATA 1355261 45 97.8 29 ...........................-.................. AATCAGAACATTTTTAGCAATCAGCTTAT 1355187 46 100.0 30 .............................................. CTTTTCCTCAGTGTCGCTAACGTCAATATC 1355111 46 100.0 29 .............................................. TGGCGTAATAACATAAAACGCAATAATTC 1355036 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 21 46 99.9 30 CTTGGTTTTAATATGTCAAAGAAAAAATTTGAAAGCAAATCACAAC # Left flank : AAATATTATTATCGCTTATTACAATCCCCTCGCTGTATTAATGGGGGCAGTTAATGAGATTTAACGAATATAGAATCATGTGGATTCTCGTTTTTTTTGACTTGCCCACCGAAACCGCTCTCGAAAAGAAAGCATACGCCAGATTCAGAAAGGAATTGTTGAAGGACGGATTTACGATGTTTCAGTTTTCAATTTATATTCGCCATTGTCCCAGCAGGGAAAATATGAATGTTCACGTTAAACGTATTAAAAAGATGCTTCCGGCTAAGGGACACGTGGGAATACTTAAAATTACGGACAAACAATTCGGAATGATGGAAATATTTTATGGAAAAAAGAAAGAAAGCGGTTTTGTGGAACCTCATCAGCTGGAATTGTTTTAAAAAGCCCTCTCTTTCGTAAAAAGAGAGGGCTTATTGACATTCCTGTTCCCCCGTCTGATTTTTTTAATCCTAAAATCATGCTAACTCATTGAATAACAACGAGTTAGTTCGGGGTAC # Right flank : CAGTTTAAGCAGCACAGTAGCTACGCATACTTGGTTTTAATCCGTCAGAGACGGACAGGTATGTCAAAGAAATCCCGACAAGGTTGAGAGAAAGCAAACCATTATAAACCATAAAAAGTATAGTCGGTAAAAAACGCCTCTAATTGTTATTGGATTCCTATATAAGAAAGATTGTACAAGTAATAAAATCAATTTAAGTATGCTTCTGTATCGGGCACATGAATGCGTACGGAAATATACGGAATAAGTACGGGGAAATATATGCGTACATGATTACGATTAACTATAGAATATAGCCTGGTGAGATTAACGTATGAGATGTAATATACAAAACCGCATTAAAAGGATTGGTTTGGTAAAAATATAGCCAAAGGCTTATCATTGAGAGAGCGCTCATTGATCTGCCGTTACAACCGCATGAGCATTTCTTAAGAAACGGTACAGAATAACAGCGAATAATCCTTTATTTAACAAAATTAACGGACTAATATACCGACCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGGTTTTAATATGTCAAAGAAAAAATTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 2661872-2663291 **** Predicted by CRISPRDetect 2.4 *** >NC_018178.1 Melioribacter roseus P3M-2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2661872 30 100.0 36 .............................. CTGTTTCCGACGTTTGTTGTTCCGTCGTTTGTTGTT 2661938 30 100.0 37 .............................. TTCGCAAAAGCGGAATTAGTCTCTGTGATTGCAACTC 2662005 30 100.0 36 .............................. TATCTTTCTATGTATGCTTTCTCTCGTGCTCTATCC 2662071 30 100.0 37 .............................. ATGCTCAACACATGGTATATGTGTATATGCGAAAACA 2662138 30 100.0 35 .............................. TAATTTACAAGCCCGTAGTCAAGCCCGCAAAATTC 2662203 30 100.0 35 .............................. ACGAAATGAAAATTTACAACATAGAACTCGATTAC 2662268 30 100.0 36 .............................. AACAATTCCACCCAGCCCGACGGCTCTCGCCTTCTC 2662334 30 100.0 35 .............................. ATGGCAGCGAGTCGTTCGTCGTCGATTTCCTTAGC 2662399 30 100.0 36 .............................. AATCGACGATAAGCGAAATTGCGGAGGACTACGGCT 2662465 30 100.0 36 .............................. TATCTTTCTATGTATGCTTTCTCTCGTGCTCTATCC 2662531 30 100.0 37 .............................. ATGCTCAACACATGGTATATGTGTATATGCGAAAACA 2662598 30 100.0 38 .............................. ATATATGAGACATTGCGTCGGCGGATATTCTTCTCCGG 2662666 30 100.0 36 .............................. CTTAGTAAAACGTGGGAATATATCAGTGCGCTGGGA 2662732 30 100.0 34 .............................. AACACATGCTAATCATATTAGAAGAAACGCCCGG 2662796 30 100.0 36 .............................. GTACGGACAACCGCCAGAACATTATTATCTATTCGA 2662862 30 100.0 38 .............................. GCGCTACTTCTGCATGCGATTATCAGAATCGAGTCTGA 2662930 30 100.0 37 .............................. GAATACGATAATCCGTATGGAGACAAAGCGCTTTCGC 2662997 30 100.0 36 .............................. GCATTACGCCGTATTTGTCGAAGTCCAGTTTTTCGC 2663063 30 100.0 36 .............................. AGTTTTACGTAAACAAGAAGGTTGTACAGAGGATAT 2663129 30 100.0 36 .............................. GTCTTGTCTTTCGCTATTACTGCGCCTTCAAGTCGC 2663195 30 100.0 37 .............................. TTGTTATCTTGCGGACGCTATGTAAATCCTCTCTAAT 2663262 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 22 30 100.0 36 GTTTTAATCGCACTATTGTAGAATTGAAAT # Left flank : ATCATATCGAAATTCGACACACTCATTGCGCTCAATCAGCCGTCGCTCGATAAATTCGAAAATTCGATTAAACCCGGCGGGCTGCTTATTTACGAAGCCAGTACGATATTGAATCCTCCCAAAAGGACCGATATCGAAATCTTGCCTGTCGAAGCCGCCAACGAAGCCGCCAAATTAAAAAACACGCGCGTGATGAATATGGTTGTGCTGGGCGCATATCTCAAGAAAAAACCTGTTATTTCTTTCGATACGGCGCTCGAAGCCCTCAAAAAAGTATTGCCTGAAAGATATCATCATCTTATTCCGCTCAACAAACAGGCAATCGAAAAAGGAATGGAACTGGCGGAAAAAGTAGGCGATATTAATTATCAGAATTAATTTTTGCCGGTTTTCTTATTGAAATGTCGTCGACCTCCCGGGGATTTTGCACTATCGGGGGTCGACGACGTTGTTTTAAAAAAATGTTGCATTTATGAACTAAAATGTTGATATTTTAACGG # Right flank : TTCAATCCTGAATCGAATGGGCTGTAGTAATACTTTGGTTTTAATCGCACCCGACTCTGACGGGTAGAATTGCCCCGCTTGCAGCGGGGTCTCCGTTCGTCCGTCATTCGACGGACTCACTTCGAAAATCCGAACTACAAAATTGTCATGCTGTTATGGTTTTAATCGCACCCGACTCTGACGGGTAGTATTATTTTGCCGGCGCTGATTTTATCGAAGTGATAGTCCTGTCAGGTTCAAGCGGTCGCTGAGCTTGTCGAAGCGACTTCGTTCGTCCGTCATTCGACGGAATCACTTCGAAAATCCGGACTACAAAATTGTCATGCTGTTATGTTTTAATCGCACCCGACTCTGACGGGTAGTATTATTTTGCCGGTCGCTGAGCCTGTCGAAGCGATAGCCCTGTCAGGTTCAAGCGGTCGCTGAGCCTGTCGAAGCGAAGATTGTGTCCCGTAAAAGTCTACAAGTTTGTAAAAGCAATGTAAGAAAAAATCATTCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACTATTGTAGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //