Array 1 20572-17360 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMP010000031.1 Acinetobacter baumannii strain MRSN2012 MRSN02012_contig00031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 20571 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 20511 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 20451 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 20391 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 20331 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 20271 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 20211 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 20151 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 20091 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 20031 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 19971 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 19911 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 19851 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 19791 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 19731 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 19671 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 19611 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 19551 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 19491 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 19431 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 19371 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 19311 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 19251 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 19191 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 19131 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 19071 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 19011 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 18951 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 18891 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 18831 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 18771 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 18711 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 18651 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 18591 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 18531 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 18471 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 18411 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 18350 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 18290 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 18230 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 18170 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 18110 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 18050 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 17990 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 17930 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 17869 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 17809 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 17749 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 17689 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 17629 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 17569 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 17509 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 17449 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 17389 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //