Array 1 31549-33306 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERSD010000020.1 Bacillus sp. REN3 NODE_20_length_77677_cov_150.020373, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 31549 32 100.0 35 ................................ TTAACCGCCTGGATAATCTGCGCCCCGTTTTCATC 31616 32 100.0 34 ................................ GCCACGGGCAGCACGGACAGACGGTTCATAGCCA 31682 32 100.0 35 ................................ GTTATCGATGAAAAAACACTTGGTCAATATACGGG 31749 32 100.0 34 ................................ ACCTAAAATGCATAAACAACGCTCAAAAAAATGT 31815 32 100.0 35 ................................ ATTTCTCGAATTTATTAAGAACATAGACTATTCGA 31882 32 100.0 35 ................................ ACCTCTCTTTTATGCAGGTTTTTATGCACCAAATA 31949 32 100.0 34 ................................ AATAGACTCTGATCAGCTTTTAAAAGAGCTCGAG 32015 32 100.0 34 ................................ CGTACCGTGAATCAGCTACGCAAAGCTTTTACGA 32081 32 100.0 34 ................................ TGCCAATACTCTTTGCGACGATATAAACCTTATG 32147 32 100.0 35 ................................ AAAATCTTGACGGAAGCACCACTAGAAAAGCTATT 32214 32 100.0 33 ................................ GCTACGTAGAATTGGAACATTACGTGGCACGGA 32279 32 100.0 34 ................................ GTCACAATAGATAACACACCGATAACAGTACGGC 32345 32 100.0 35 ................................ CTATCGTGTTATCCCATCCCTCAATCACATCTGCG 32412 32 100.0 33 ................................ CATCGTATAGAATCCCGAGACGCCATCCCCGTC 32477 32 100.0 35 ................................ GTTATCGCCGGTACAGGTACGGCAGACTGCCGAAT 32544 32 100.0 34 ................................ GATGAACACTATGAGAAAGCGATGCTGAATACAG 32610 32 100.0 34 ................................ ATGGCAGCCTGTTTTGTAACATATCCCCTTGTCG 32676 32 100.0 34 ................................ TTTGATTAGGGTGCTGGAAATGGATGTCTTGTAC 32742 32 100.0 36 ................................ CAAAGCTATGCAGGACGTCACTGCAGCCCTTCTTGG 32810 32 100.0 35 ................................ GACTTTGCCAGTTCCATTGCACTGGTAGTACCGTC 32877 32 100.0 34 ................................ AAAAAAAGCGCCATTAAAACCCTGGTGAACTTTA 32943 32 100.0 35 ................................ TCTGGATTATTTGTTTGGACGGTCAGAATTACCTG 33010 32 100.0 34 ................................ AATTGGAACAGCTTTGGGTTGTGACTTTTTAACA 33076 32 100.0 35 ................................ AGTAACTGCCATGTCTTTTTCATCTCCCTCATTTA 33143 32 100.0 34 ................................ TCTGATATAGGCTCAAATGTAAATGAATCATAAC 33209 32 100.0 34 ................................ ACGATTGCGGAATAGATCTAAAATGCGACATAAA 33275 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 27 32 100.0 35 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : AGTTTACTATAGGGAACACGGTAGGAAATCCCAATTAAAGAAATTTGATTTGATGATCAAACATCATAATCTTGTACTTTGGGATATTTAATCTCATACATTAATAGATAGATATTGAGTTAAATATAATTTAATTAAATCTAGTTGTATGGTGTGTGATAGTAAAATATTGGTATAATGAAATTGCCAATATATTACTTGAAGAGACAGTTAATCCAATCTCTTATGATTGAGGCATCTTAGAAAATGATTCAAGGTTTTTATAGCAAGAGATGTTAAATGGGAAAGATAATTCCTAACGGCCGATCTTCGAAATACTAAGTGCGAATATGAAGCTCACAAACTTTTACAGGAAGATTCGCACCAAAAAACATCTCCCGATAAAGAACAAATCTGTTATTTTGGCTATTTTTTATTACTTTTAAAATAAAATTATGTTTTTTGCTTAATTAAATGCTAATAGCAGATTGTTTTTAATCAATTAATAGCATAAAACCGCA # Right flank : TATTGCCAAATGGAATTTACCTGATCCTCAACCAATGTTGCTAAGCACTCCTTAGGGTCCGTGAATTAAAAAAGTAAGAAACGTGAGAAGGGGAGAACAAAAATGTCTTATATCGCTCATATTCGTGCAAGCGATGGGAAGATTCAAACTGTCAAAGAGCATTTACTAGGGGTAATGACTCTTGCGGAATCTTTTGGAGAAAGCATTGGGATCAAGCATATCTCAGGGCTTGCTGGTTTGCTCCATGATTTAGGGAAGTATTCTGAGGAGTTTAGAGAGTACATCTTGGCAGCTGTTAACAATCCGGATGAAGCTCCTAGAAGGGGAAGTGTCGATCACTCTACGGCTGGAGGAAAACTACTGTATGATTTTTTTCATTCTGATTTATCGAATCCTTATAAGGTGATCTTGGCTGAAATTGTTGGAAATGCGATTATTTCTCATCATAGCTATTTGCAGGATTTTCTGAGTCCAGAATTGGAATCGAATTATTTAAAGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 41670-49009 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERSD010000020.1 Bacillus sp. REN3 NODE_20_length_77677_cov_150.020373, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 41670 32 100.0 35 ................................ ACACCCATGTTAGCGAACGCATCCTTGATTTTGTC 41737 32 100.0 34 ................................ TGCAAAAGGGACTTTAACTGTTGAAAGGGATGAC 41803 32 100.0 34 ................................ TTCCCTATCGGCACTTCCCACTTACCAGGCTGTA 41869 32 100.0 34 ................................ TCCTACCGTGCTTGCATCGGGATTTAGGATTTTA 41935 32 100.0 34 ................................ TTCGGTAAAGCGGGCGGTCTGATGGGCAAAGCGG 42001 32 100.0 35 ................................ CATCATGGATGCTGCAAATGAGAAAAAAGAAGAAA 42068 32 100.0 34 ................................ CTGTGTGCCTAATAGAGTAGTCCACGCAACCTTA 42134 32 100.0 34 ................................ AACATATGGCATGGGACGGGGCCAGAAGGATACA 42200 32 100.0 34 ................................ ATCACCACCTAAATAACTCATTCCAATAATCCCT 42266 32 100.0 34 ................................ AGTATTGGGTAAGGCGAAGAGAGACTGATTTAAC 42332 32 100.0 33 ................................ TTTCGGTATGATACGGAACAACCCGACATACTC 42397 32 100.0 34 ................................ TTTGACTTGTTCCCTGTTCATTAAATATCCTCCC 42463 32 100.0 34 ................................ ATCATTCTGTGTCCAGTCGATAAGGTACTTGATG 42529 32 100.0 33 ................................ CCTTCGGCCGTCTCTGCCACCTGTTCGGCGTAT 42594 32 100.0 34 ................................ CAGTGTGGTAAATCGGGTTAGGCAGGATTGGCAT 42660 32 100.0 34 ................................ CACACTGTTGTTCCGTATTCCTTAATGCCATTAG 42726 32 100.0 36 ................................ CTGTTGATGAATGGGAAATTATCGGAAATGTTTACG 42794 32 100.0 35 ................................ ACGTTTAAACGTATAGCTAGGTACCTAAAATTCCA 42861 32 100.0 34 ................................ AGGGCTTACAAGGGATAAAGACATTACCCTTGAA 42927 32 100.0 35 ................................ CTGTATGCTTGTTTGCCTGCATAGCAGATAATGCT 42994 32 100.0 34 ................................ TCTGGATGATTTATTTTTTTAACCGCTTGGTTGA 43060 32 100.0 35 ................................ ACATTTAAATACACAATGATTACCAACGATGCGGA 43127 32 100.0 33 ................................ ACCTTGCCAGTTGTCTACAGCTCTTACAAGGTC 43192 32 100.0 34 ................................ ATTTGTCCGGGGATCGTTGTAAATATTCCTCACC 43258 32 100.0 35 ................................ TTACCATGGGTCTTGGCGCGTTGGCCGCGGCTGAA 43325 32 100.0 34 ................................ AAGAAAACTTTGAAAGAAATTGAGAAGGCTCCTA 43391 32 100.0 34 ................................ ATTTGGTTCGGCTTTATAAATTCAATCAAAAACA 43457 32 100.0 35 ................................ CTCCACTACTGCTTGCTCACTGTGTAAATGAGCAG 43524 32 100.0 34 ................................ TCTGGTTTATGTGCGACAAAGGGCACGGCAAACC 43590 32 100.0 35 ................................ AACACCGGGAGTAACAGGTTTTCAAAGATTCCCCA 43657 32 100.0 36 ................................ ACGTCAACATTGTATCTCTGGACAGAAAAAGGAGCA 43725 32 100.0 35 ................................ AAGGCAAGCAGCTCACCTACACGCATTCCGGTAAA 43792 32 100.0 34 ................................ ATTGATTAAATCAGCTAAATTATATTGCCACATT 43858 32 100.0 35 ................................ ACACCATCCACATAAACGTTATAGCCTTGAATATC 43925 32 100.0 34 ................................ GTGATACATTTTGTAAACTTCGCCATCTGAGGTA 43991 32 100.0 35 ................................ ACCAATTCGGTTGACACAGGGGCATATGTAAGGGT 44058 32 100.0 35 ................................ TTAAACAGCAGCAATCTGGCCGTTTTGGTGCGGAA 44125 32 100.0 35 ................................ ATTGAATAAGATCGTGTGGGCGGATGACAATCAAG 44192 32 100.0 35 ................................ AACAAAATGATGCATGGATTAGGTTACAGCCGAAG 44259 32 100.0 35 ................................ TGATGCAGATAAAATTAAACGATACGAATTTGCTT 44326 32 100.0 35 ................................ TCCAACGAATCGGATTCCCTAGCAGCTTGTCCGGT 44393 32 100.0 34 ................................ AGAAAGGCATGCCAATGGGTAAGCTTGCAAACGG 44459 32 100.0 33 ................................ AGAATGTTCAAGTGATGATATGCATGAAGCTGG 44524 32 100.0 36 ................................ TAAAACAGCAACAATCTGGACGTTTTGGTGCCGATA 44592 32 100.0 34 ................................ AGACCAAAAGCCAGTATTGAGTGGATCTGACCTT 44658 32 100.0 36 ................................ TTGTGAAGGGAACACAGCGTATAACAGACGAAGAGC 44726 32 100.0 36 ................................ GCATCTTCAAATGATTTATCATAAAAAGCTGCAGCA 44794 32 100.0 35 ................................ ACACATACAGGAGGACGCGGTTAGTGCGGTGGATC 44861 32 100.0 35 ................................ TCATATTATGGAGTCACCGTCACTTTCGGCATGTA 44928 32 100.0 33 ................................ CCTTGCCATTGGACAAGGTTTTCGATTTGCTGG 44993 32 100.0 35 ................................ CCTTCTTCAAGACCAATGACCTGATAAAAGTTGTT 45060 32 100.0 34 ................................ AGAATCTAAGTCTTGTTCATGATTTTTTTCATAC 45126 32 100.0 35 ................................ CTCAATAAGCGTAGCCAATTCCTCGAAATCGAGTT 45193 32 100.0 35 ................................ AAAGATGCCCCAGGCTGTTTTAACTACATTTTTAA 45260 32 100.0 36 ................................ ACTACTCAACTGAACCTTTTATTACCATAGCACCCA 45328 32 100.0 34 ................................ TCGTTATGTAATAACCTATCGACGGAAAAGGAGA 45394 32 100.0 34 ................................ TTGTCGTAAAAATCACGATTTACAATTCTTCGAA 45460 32 100.0 35 ................................ TCTGCTTCGATGGCTGACAAATACTTGCCCATGAT 45527 32 100.0 35 ................................ AAAAACAATCTATTGCCAATATTCGCCTCTGTATA 45594 32 100.0 34 ................................ CTGCTTCGATGGCTGACAAATACTTGCCCATGAT 45660 32 100.0 34 ................................ GGTCAACCAGTTAAACTTAATATTCAACGTACCC 45726 32 100.0 36 ................................ TACTGTTCTGCCAAACGCCAACAGATTTAGATCAAG 45794 32 100.0 34 ................................ TCCCTTGAAATGCCAGCCAGAAGCTTAACAGACA 45860 32 100.0 34 ................................ ACCACTTCCACCACTAGGAATAACAAGAGGATAT 45926 32 100.0 34 ................................ CTTCTAGAGTGGATCAAAGAGCAGCCGACTCATT 45992 32 100.0 33 ................................ AGTATTGGGTAAGGCGAAGAGAGACTGATTTAA 46057 32 100.0 34 ................................ CGTTTGGCATGATTGATTATGACAAGTATGAGCT 46123 32 100.0 35 ................................ CTGTTGTTGGAGAGGATGCAGTAGGCAATGAAAAC 46190 32 100.0 34 ................................ CTTCAGGTGACCCGGAGATTGACAAGGTTCTAGG 46256 32 100.0 35 ................................ CACAACCTAAACACTCGAAAAACTGGGCAACTGAC 46323 32 100.0 34 ................................ TCCACGATGTAGTTGATTGCGAAAGTATCTTTTC 46389 32 96.9 35 .................A.............. CTCTCAACAGTAGACGTTGACTTCAACGTGATGAG 46456 32 100.0 34 ................................ ATCAAGAGGATCGTCGGGCTGACAGGAACACCAG 46522 32 100.0 35 ................................ ATCCTTGAAGAAATGCAAATAAGTCCAATTGTCTT 46589 32 100.0 35 ................................ TAATCGGTGACATTGCCGATGTAACCGAGACTGAC 46656 32 100.0 36 ................................ TTTCTGCTGGCGTCATATAAGGAAATGCGTGATGAA 46724 32 100.0 33 ................................ TAGTAAACAGCAAGAAGCGCTGTCCCTTTTAGC 46789 32 100.0 34 ................................ TGGACATCGTTTCAGAAAACGGCTACATGAGGAT 46855 32 100.0 35 ................................ TTAATCATGGTGAATAGTTTAGGCATCGACACCGC 46922 32 100.0 35 ................................ ATCCACTTGAACTAAAAGACCATGAACACGCTCTG 46989 32 100.0 35 ................................ TTCCGGTCTGCAAAGGCTCCGACTTGTACCTTATA 47056 32 100.0 36 ................................ AAAGGTAAGGATATTTTCTTCGTCGACCATATTGTA 47124 32 100.0 35 ................................ TCCACCGTCATGTTGCACATGGTTATGGAAGAAGC 47191 32 100.0 35 ................................ CGGTTTTATCAACTGTGTATTCAATGCCTTCATGG 47258 32 100.0 35 ................................ GCCTTTAAATCGGCAGCCAGGCGGTCTGCGTTCTT 47325 32 100.0 34 ................................ ATGGATACATCGGGCCCAAAGTAGACATAAGGCA 47391 32 100.0 34 ................................ ATATCCTCCGAAGTCAAGCCCTGCCCTATTTGCC 47457 32 100.0 34 ................................ ATATACAGTGATAAAGATGCGTTAGAATTTAACA 47523 32 100.0 34 ................................ TAACCCCTTTTGCAGTAAAGCCAGCCGGTTGTCG 47589 32 100.0 33 ................................ CCATATAAATAAATCTAATAATTTTGTATCCAA 47654 32 100.0 34 ................................ GTGCTATTGAAATTGACGGAGTAAAAGGGCGTGT 47720 32 100.0 34 ................................ TAAATTATTGATGTGGAGTGATGTGAAATGTTGA 47786 32 100.0 34 ................................ TCTGTATTTCCTGTCTTTCAGCTTCCCGGCATTC 47852 32 100.0 35 ................................ GAGAAAAAGGTGATTAGATGGGAGGGGCATTTCAG 47919 32 100.0 35 ................................ ATTTCTTGAATAAAATGTACAAGGTCAATCGTTTC 47986 32 100.0 35 ................................ TTGGTTGCGACATGATTGATTTGTATGATTGGGTT 48053 32 100.0 34 ................................ CACATCATCCAGTGTACTGAGTGATCTAGTCAAA 48119 32 100.0 33 ................................ AAGAACTTAGACACTCACGTTTGGAATATCGTT 48184 32 100.0 35 ................................ ATGAAAGAAGGTGAATAAATGGAACTTTTCAAGCT 48251 32 100.0 34 ................................ CTCCCTTTATCTTGTTAACCACATGCCAACAATT 48317 32 100.0 34 ................................ GGTCATAGTGCATTAATACGAGCGGTGACAGAAG 48383 32 100.0 34 ................................ TTTTATACTATAAAACACTTGTCGGTTGGTCTTA 48449 32 100.0 34 ................................ TTTTAGCATCGATTTCAGCAGCAAGCTCTTCGGC 48515 32 100.0 35 ................................ TCCCATTTGCGAATCTGTAACCTCCCTGTAATGCC 48582 32 100.0 33 ................................ TTCACGCTACATTGGGAGAAACAGCGTGGAATG 48647 32 100.0 35 ................................ ATTTCCGGCGATGCCACACTATTAGGATTATAGTC 48714 32 100.0 34 ................................ AAAGTGCTTGAGAGTGACTTGGAATTAATAAACG 48780 32 100.0 35 ................................ CACCTAATTTTTATTATGTGGACTATACGCCAGGA 48847 32 100.0 33 ................................ TACCGCAGAATCTTCTATCACGCAGAATGCCGG 48912 32 100.0 34 ................................ CTCATGCCGCCCCTCGGGTTTTTGATGAACCAAT 48978 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 111 32 100.0 34 GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : AGATCAATATCCGCCATTCTTATGGAAGTAGGTGAACCATTTGTTGATTCTCATCACTTACGATGTAAGCACAGCAAGCAGTGGAGGGCAGAAGAGATTGAGAAAAGTAGCAAAAATCTGCCAAAACTACGGCCAGCGGGTTCAAAACTCTGTTTTTGAATGTATAGTTGATTCTACACAATTCGCTTCTTTGAAAATTGAACTTTTGAACATCATTGACGAAAATCAAGATAGCCTGAGGTTCTATCAATTGGGAAACAACTTTAAGAATAAAGTTGAGCATGTTGGTGTGAAAGAATCAGTGGATTTAGAAGGTCCGCTTATTCTTTAGTGCGAATATCAAGCGCACATAAAATTCCCGGGGGATTCGCACCAGTTTTCTTGTAAGTTATTGTCGAATTAGAATATCTGTTCCTCTCATTTTTGAAATAATTCAAAAGAAAATAGCGTTTTTTAACTTCTTTGTGTTGGAAAGTAAAGCTTTTTTGTTAAAAAGCGCT # Right flank : TTCTGTACAGAGTGGAATAGTCGCCCAAGCGAGTCGGAGTGCTGCAGGCAAGCGTAATTGCCAATTCAGCGATGGAAGCTGAAACAGCTGCGAAAATCCTGTGCATTCTCCCATATGAGGATGCCAAAGCATTGCTGTACAGGAAACTCCCGTGTATTGCTTACTTTGTTTACTTTGAAAATGACCAGATTGCCATAGGCGGAGATCCGAAGTTTTATCAACGATTGGAGGCAGCGAAATGAATTGGATCTGGATTGCCATTCGCGCAACAGGGTTGACAGGGTATTTTTTGCTGACAATCTCACTATTATTGGGCATATACAGCCATATTCCGCGTAAAAAAGGTTCGATCCTTGCTTTCCATCAAATCATTGGCCAGGTAGCCCTCTTATTTATTGGCATCCATGCCTACCTGCTAATCTTTGACAACTATGAGCCTTATTCCATAAAGGCGCTCCTCATCCCTTTTACTGCAGCGTATGAACCGATTTTATCCGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //