Array 1 92-740 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHOD010000032.1 Paracoccus denitrificans strain DSM 104981 Ga0373373_32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================================================================================================================= ================== 92 32 96.9 35 C............................... TGAAATCCTATGAAATGATGGTGCGCCGTCATGTC 159 32 100.0 34 ................................ TCGTGTCACCATCGGGCGCGATCCGCGCGCCCCA 225 32 100.0 35 ................................ CTATTCCGGGGCGTCGTCGATCCGAGCGACGGTCG 292 32 100.0 34 ................................ AGCACTCCTGCCCCAGCCAGCGCGATTGCTGCCT 358 32 100.0 34 ................................ CTGTATCCCGATGGCGGCGCGGGGTTCGTCCTAT 424 32 100.0 34 ................................ ATCTCGAACCGGCGAACATCGGGCATATCCAAGC 490 32 100.0 185 ................................ ACCGGCAAGAACGTCACCTCCGAGCCTTGCAGTTCAAAAGGGGGGCGCGGACGGCTGATCGGACGCACGAAGGGCGGGCTGAACTCGAAGCTGCAGGTGGTGGCGGACGCGAAGGGTCGTCCGATCCGGATGTTCCTGTCGGCGGGGCAGACCTCCGACTACATTGGCGCGCGGGCGCTGCTGTC 707 32 75.0 0 C...AT........C.......T.C.T..G.. | G,C [718,735] ========== ====== ====== ====== ================================ ========================================================================================================================================================================================= ================== 8 32 96.5 56 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : GAGAGCCGGCAATTGCGGCTGATACGATTTCTTGGTAATATTCGGTATCGATGCACAGGAGGCCCGCATGTCCCGCAACACATCGGTTTCGC # Right flank : CCGGGGTTATGATGCCGACTAGTTCCGCAACGCGCTGATCGAGATGGGGATTTCACCGTGTATCCCGTCCCGCATCGGTCGCAAAGCCTCGGTTCCGCACGACACCGAACTCTACCGCCTGAGCCACAGGATTGAGAACATGTTCGCACGCCTCAAGGACTGGCGCCGTATTGCAACCCGCTAAGACTGATGCCCCATTCTGTTCCTCTCCGCCTGCGCCCTGGCTGCGACCATCATATATTGGTTGTGAGCCCTGACTCTAAGCGATCAATTTTCAGGAGACCTTTTGGGTTTGGTGGATAACCATTCAGAATAGAGAGTGCGCTCGTCGCTTGTTAGCGTCGCCTCGATCTGGCAGCGCAGTTCTGAGTACCGGCGGTACTCTGCCATATCCTGAAACCTAGGAACCACATACATTGCTGGGCAGGGGAAGGGCGCAAAGCCATAATATTCTGGATCGTTGTCGCGGGCCCATTCCCATCCCGCGTCCTTGTAAAAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.00,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //