Array 1 63317-59401 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJEO01000034.1 Confluentibacter flavum strain 3B 498, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 63316 46 80.4 29 AGGAC.GG.CA................................... CTCAAAGAATTGGCGCAAATGCAGAATGT T [63304] 63240 46 100.0 30 .............................................. CATTGGATCATTACTTAATGTCAAGCCTAT 63164 46 100.0 30 .............................................. ATACGAACGTTTTTGTAGTTTCCATTGTTA 63088 46 100.0 30 .............................................. ATGCATCCAATCAATCCAAACGTATCACCG 63012 46 100.0 30 .............................................. CATATTTATAGTTATTAATTGCCACCCTTT 62936 46 100.0 30 .............................................. TTGGCTACAATATTCGCAAATTCATTTACT 62860 46 100.0 30 .............................................. TTTACCTTTACTTTGATGAATATCTGTATC 62784 46 100.0 30 .............................................. ATTTGGTTAATTTAACAATTCAAAATTGTA 62708 46 100.0 30 .............................................. AAACAAATGCCGCTGAGCCTATCAATACAA 62632 46 100.0 30 .............................................. CACCCTTCTCGAAACCGGCGTGGCTGGCCC 62556 46 100.0 30 .............................................. TTGGTAAATGAATCAACCATCCAGCTATTT 62480 46 100.0 30 .............................................. CATCCTATTGTCTATGTAATTGGGCTGTGG 62404 46 100.0 30 .............................................. AAAGTCCGACAGCTACCGAAGATATATCAA 62328 46 100.0 30 .............................................. AGTCGCAGCATCGATAGTCATATCATTATA 62252 46 100.0 29 .............................................. ACAATGGTATTTATCTCTTTTTGTAAATC 62177 46 100.0 30 .............................................. CGTAATAAATCTTCGGTTAATGGAACTGGT 62101 46 100.0 30 .............................................. CTTAGGTTTTTTTGGCTGTTTAACTTTTGT 62025 46 100.0 30 .............................................. CTTATCTTATTTTACAATGTTACCGAGGCC 61949 46 100.0 29 .............................................. TAAGGTGTTTGTGTTTATTAACCACTCGA 61874 46 100.0 30 .............................................. AAATCCAACAGTTACATAGGCCGCCCATCT 61798 46 100.0 29 .............................................. CCCCCTTTTTTGTAATTGATAATGTCATA 61723 46 100.0 30 .............................................. CAGCTTCAATGTCATCTTCAGAAGCATCTT 61647 46 100.0 30 .............................................. TTTTTGGTAATGCTCCAATTCTTCCCAAGC 61571 46 100.0 30 .............................................. AAAACGGTGTTCTTTTTGAAATGGTAAAAG 61495 46 100.0 29 .............................................. ATTCATGGCATCAAACAATAAATTAGCAC 61420 46 100.0 30 .............................................. GCATCCGGAGTATTATTTATTGCTGCCTAT 61344 46 100.0 29 .............................................. CACGTAGTTTTTAATTGTGTTTGCAGAAT 61269 46 100.0 29 .............................................. TCAATAATTTCTTGATCTTTAGCCCGTAT 61194 46 100.0 30 .............................................. GAGTACGCCTATATGGTGTGTGAAGTTTGT 61118 46 100.0 30 .............................................. CAAAAACCCAAACCAATACATTTACGTATT 61042 46 100.0 30 .............................................. ATTAAACGTAAAAAAGCGTCGGAAAAAATA 60966 46 100.0 30 .............................................. TTTTGCCTCAATGTTTTAGCTTGTTTGGGC 60890 46 100.0 30 .............................................. AGTTTAGCCTTTTCTAAAGCTTCTTTATTC 60814 46 100.0 30 .............................................. CTGTTACAGAAAATTGACCATAACCTGCAA 60738 46 100.0 30 .............................................. TATTAAAAAAATAGGACTTTTGGATTTTGC 60662 46 100.0 30 .............................................. TAGTGTCCGCCGCGAATTGTTCAACTTGCG 60586 46 100.0 30 .............................................. GCATTACTTAAACTCCATAAATCCTGACCA 60510 46 100.0 30 .............................................. AATAGAGTTAAATTGTTTCATAATGTTAGT 60434 46 100.0 30 .............................................. GAACATATGTAGCTTCATTTACAAATTTTG 60358 46 100.0 30 .............................................. GTACACCCTAGTGTACCAATACGTTTACGC 60282 46 100.0 30 .............................................. CGGTACGCTTATCAGCATATATGGTATTGG 60206 46 100.0 30 .............................................. CCTTCGCTAACCATCACCACCGCCCGAAGC 60130 46 100.0 30 .............................................. AAACCAACCAAGTGAAAAAATATATCATTC 60054 46 100.0 30 .............................................. TCAATCCAAATTGATCCATTTAGATTGCTA 59978 46 100.0 30 .............................................. AAAGATAAACTTTCGATTATGGATAAAGGT 59902 46 100.0 30 .............................................. CGTTGACCCTAACGCAACCTAGTAATTTAT 59826 46 100.0 30 .............................................. GCAAGGTTGCTAAAGAAAATAAAGAGCATA 59750 46 100.0 30 .............................................. TGAACAATAAAAAATCATCGGTCACTTTGT 59674 46 100.0 30 .............................................. TATTTCTACATTTTTATAAAGTTCTAAAGC 59598 46 100.0 30 .............................................. GCACGGCAATAATAATACTTTTATTGGTCC 59522 46 100.0 30 .............................................. ATAATGGATCACTCTATCTTGTGGAGTCAT 59446 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 52 46 99.6 30 GTTGTGAATTGCTTTCAGTTCTTTAAATTTATAGAGAATTCACAGG # Left flank : AGCTCTATTTTTATACTTATAGTAAGCATTGCGTTTATGTCCAAAAAATTGGTTATAGTAGTTAAAGAAGCAAATCCCTTACCTTTTTCTTTGGCTTTGATCAAGGCTTTATACTTAGCTTTTTTTTTAGTTCAGCCACAGATTTGTAGCCCAGGTCTTCTGCTGCGACTTCCAAGTATGAATCCAGTACCAATGCATCCAAATCCTTTTTTAGGAGTAGCTTTTTAAGCTGTCCGATCTCTTTTTGCAGTTCCTTGATTCGTGTTATCTCGTCTTTTGTTTCCACTTTTACCCTTGTGTTCATTAGGTTCTTACGGTTGTACTTCCTGATCCATTCGTTAATGGTGGTAGGCGCAATGCCATAAAGTTTGCCTAGTTGGTTTTTGTTAAGTTTTCCAGTTGTGATTTCGTCCAGAATTTTCAGTTTAAAAGGTTCCGAATACCGTCTGATTACTTTGTCATTTTTGTACATAATGTTTAAAATTATGTAGCCTTATTTC # Right flank : ATACTTGCCGTAAAAGGCTGGTATCCTGTTTTTTAAAAATCTGTTAAAATACACTAAATCCATTAATTTTTAGATTTTCTACTTTACTTAACTTGATTTTTTAAATGCAATTGCTTTATGTCATGCTGAAATAAATTCAGCATGACGAAATTCTAAAAGAGTTCTAACTGCTGACTGGGCGTTTCAGGTTCTATCTCTTTTTGCCCATGAAAAAGTTCAATCATTCCAAATTGCTTATCGGTAATTTGTAAAATACCTATTTTCCCCTTTTTTGGCAACGCCCTCTTTGTACGCTTTACGTGTACCTCTGCATTTTCCCTACTGGCACAAAACCGCATATAAATACTAAACTGAAACATGGCAAAACCATCATCTAATAAGTTTTTACGAAACTTTGTGGCTACCTTTCTTTCGGTAGCGGTTTCTGTTGGCAAATCAAAAAATACCAGTACCCACATGCTTCTGTATTGGTTTAAACGTGAAAAACGGTTCGCTCCCAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAAATTTATAGAGAATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //