Array 1 99811-94117 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAOR01000005.1 Nitrosospira sp. Nsp5 Ga0181049_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 99810 37 100.0 36 ..................................... TAACAGGACGGCGAGCAGAAGGTCTCATAATAAAAA 99737 37 100.0 35 ..................................... GCTTTGCAGAGTGAGAGATTGATCCTCACACTTAA 99665 37 100.0 35 ..................................... CCACCAGGTGCAACAGATAACATAGGGTTTAGACC 99593 37 100.0 36 ..................................... ACGTTGATGCGCAGTATTGGACATGCGCTCCTGAGT 99520 37 100.0 34 ..................................... ATCAGAAGTGAATTTTGTATGCCAGAAATAGTCT 99449 37 100.0 35 ..................................... TTCATCCAGGCCGAATCCTGGGCATTTGCAAAATT 99377 37 100.0 35 ..................................... CAATTTTCCGCCCATAATTGTATTGGTGTAGGCGT 99305 37 100.0 34 ..................................... ATGGAATGAGGCTTTAAATCGCGGATCAATGTCG 99234 37 100.0 34 ..................................... TTTATAGATTTAATAAGATAGGAACTTATCCACG 99163 37 100.0 35 ..................................... TTGTGTCTCGTGATATTTGCTGGCGTAGCGTCCGC 99091 37 100.0 35 ..................................... ATACCATAGTCCGATCGGTACGGACTCAGTTAGGT 99019 37 100.0 34 ..................................... TCCGAAGAGATCCACGTTGACAAGTACCTGAATC 98948 37 100.0 34 ..................................... AATTCTGTAGTCATAGGTTATCCCTGTTATATGG 98877 37 100.0 35 ..................................... ATACCATGCGTCTCCGTCTGTAGAGTTGTGCTGAG 98805 37 100.0 34 ..................................... TAGTTCCCGCGCGATTATGAAGGATGGCGCATGG 98734 37 100.0 35 ..................................... GCTGTAGACATTGAACATGCTACCGAAATGGCCGC 98662 37 100.0 36 ..................................... CGGGATATCCATGACAAACGGACCATACAGACGCCG 98589 37 100.0 35 ..................................... ACCTCGCTTGCATCTGATCTCTTGCCGACTCTGAT 98517 37 100.0 36 ..................................... TGGCGCATTTAGATCTGGATATCCAGCAGCCGCCAT 98444 37 100.0 36 ..................................... CCCGTTTCGAGCCCTCGTATTCCGGTCCGGACAAAG 98371 37 100.0 34 ..................................... ATGATCGTAGTAATACCTCTCTGATTTGCTCAGC 98300 37 100.0 34 ..................................... CTCTCCACCAGCCTCTAAGGCATAAGCCAGCCGC 98229 37 100.0 36 ..................................... GCTTTCGATGGACGTAAAAAAGCCCTCGGGTGAGGG 98156 37 100.0 35 ..................................... GAGTTCAATCGAATTATCGGCAACGAGCGGATCAG 98084 37 100.0 34 ..................................... TGAAGCACGGCGGGATTCTTATCCATGCGCGCCG 98013 37 100.0 34 ..................................... TGCCCCACATCGAAGGTCGTTACCTGGACGACCT 97942 37 100.0 33 ..................................... TAATGTGCCGCTGCGGATTGAAGAGAAATTGAC 97872 37 100.0 34 ..................................... CTTAATTGATCGAGCTAGGGCGGATTGCCCCCCA 97801 37 100.0 34 ..................................... ATGATCACGTGGGAAATGTTATCCGTCATGGTTT 97730 37 100.0 35 ..................................... ATCCACAATCCAAGCGATGATCGGAGGATTGAAAC 97658 37 100.0 34 ..................................... TATCACGCCCTCTTTATGTAGAAAATCAATTCGC 97587 37 100.0 35 ..................................... CCGCGCGAGATGTAAATGGCCTGCCATGGGACGAG 97515 37 100.0 34 ..................................... CATTTAAATGGCGCACAGACAGAATATGCCCATG 97444 37 100.0 35 ..................................... GTGTTAGGAATGGTTGAATCTCCATCCGTAATTTT 97372 37 100.0 34 ..................................... GAACCTGAAGCGGATCAATGAAGTCGAGGCCGAA 97301 37 100.0 35 ..................................... ACTGTCAACCCACCCCTGAATCATGTTAGCCATGT 97229 37 100.0 34 ..................................... TATTTGGACATTATACCCCTCATCTACTAAAAGA 97158 37 100.0 35 ..................................... CATCCTTACCGACACTGGCTTGCTCGACACCGATC 97086 37 100.0 36 ..................................... ATCGTGATCGCAAGCACCCCGGTTACGGCGTCATAC 97013 37 100.0 34 ..................................... GACTACACGAAGTATATCCGCTTGGCTGCCAATG 96942 37 100.0 33 ..................................... CTAATATCGACATGCCTTGTGCGCTCGCGCCGT 96872 37 100.0 36 ..................................... TGTAAAAGTTCCAGCTGGCAATACTTCCCACTCACC 96799 37 100.0 33 ..................................... TGCAATGGATTTCTGGAACTCACGCGCGCACAG 96729 37 100.0 34 ..................................... TTGAGCGCGACGCGCGAGGCGGTACTCGCTATAC 96658 37 100.0 34 ..................................... CTAAGATTTATCAGGAAACTGAAACTTCTTCTGC 96587 37 100.0 34 ..................................... GGATATCAGGAGCGTTGGGCTGAGTATCGCTATT 96516 37 100.0 34 ..................................... GTTTGCATTCCAAGACTGGTGGTAATGAGCTGTA 96445 37 100.0 35 ..................................... TTGAGCGCGACGCGCGAGGCGGTACTCGCTATACT 96373 37 100.0 35 ..................................... AGCTTCACCGACTGCAGGGGTTGATCCATGTCGTC 96301 37 100.0 34 ..................................... ACAAATCCGATATTCAACGATGTCGCATTCCGAA 96230 37 100.0 35 ..................................... CTCTTCAACAGGTGCTCCATCGTCGGTTGCCTCAG 96158 37 100.0 35 ..................................... ATCATAAAACCTCCTATAGTCGGGTGGTACATCAT 96086 37 100.0 35 ..................................... TGAAAAATCAACCGACATGCCCGCCGATAGCGTTG 96014 37 100.0 34 ..................................... TGATCGATTGCGCCCTTATCGTCATTAGCCGCCG 95943 37 100.0 34 ..................................... ATACCCTTATCCCCTGAAAAGGTGCCGGACACTA 95872 37 100.0 34 ..................................... GTTTGCAACTTCAACAAGATGCTAATTCTATGAT 95801 37 100.0 35 ..................................... TTTCAGATTCGTACTGTTCGTCCGATGCCGATGTA 95729 37 100.0 37 ..................................... CAGACAAAATGATAGAGGGGTATACGCATGACTGAAA 95655 37 100.0 35 ..................................... CCTTTGATGCGCAGTATTAGACATCCGCTCCTGAA 95583 37 100.0 35 ..................................... GCACTACAGGCGGACGGATGGTATCTAAGGCAAGA 95511 37 100.0 35 ..................................... CTTATTAAGAACCGCCTGTTCGCCGAGCATGGCGA 95439 37 100.0 37 ..................................... TGTTTCAAGGGCTGTGACATTGGCGGTCAAGGCAGCG 95365 37 100.0 36 ..................................... TGCGGCCAAGGTAAACAAGACGTAAAATAATCGTGC 95292 37 100.0 35 ..................................... TCTGGCTAATGGCACCAGACTGGCTACCTTCCGGG 95220 37 100.0 34 ..................................... GAACTAATCCGGGCGCAATTGCTGAAGAAAAAGC 95149 37 100.0 34 ..................................... AATTTGTCGGTGGCGCTCCGGTGACTACATGGCG 95078 37 100.0 34 ..................................... ATTAGCGCAATGGGCTGTGTCCAGATTGTTTTCA 95007 37 100.0 35 ..................................... AAATTCATCCACGAAATCATGGCCGTATTTGAAAT 94935 37 100.0 33 ..................................... GTAGACGCTGCCATTTTCTACCTCGGTGGTTAG 94865 37 100.0 34 ..................................... GGTTTCCGAGCGCAATTCAACTGGCGAGAACTTA 94794 37 100.0 34 ..................................... TTGCTGTCGGGCAGACTGATCCATGCCTGATCAT 94723 37 100.0 33 ..................................... AATAAAGGTCTGATTCAAAGTAGGAAGAGAAGT 94653 37 100.0 36 ..................................... TCTAATGACTGGGCAAATTACAACGTGGCAAACAAC 94580 37 100.0 35 ..................................... GTGTATATAAATCCAAGATTCACCGTGGCACGAGA 94508 37 100.0 34 ..................................... ACTTTCCGGTACCTCTACCACTGGAACAGCGTCT 94437 37 100.0 33 ..................................... CTCGACGCCGCCAGGTTTGCTGCAGATACCGCT 94367 37 100.0 34 ..................................... AAAGGTATTAAAGTCTGGCTCCCACATCAGCTTG 94296 37 100.0 35 ..................................... ATAGGTCGTACCATTGGGGATATCTTCTTCCTCAG 94224 37 97.3 34 ........................T............ ATCAACTCAACCGTTACCGGGTAGCTCCCGCCGA 94153 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 80 37 100.0 35 GTAGCGCCCAGCGAACTGGCTGGGCGAGGATTGAAAC # Left flank : GATATATACCCTTTCTGGCGAAGTAACCATGCTCATTATCGTGACTTACGACGTATCAACCGAAACCCGGGAAGGGCGAAAAAGGCTGCGGCGTGTGGCGAAGATATGCGAAGGGATAGGGCAGCGTGTGCAAAAATCGGTGTTTGAGTGCCGGGTTGATTTGATGCAGTACGAAGAGCTGGAGCGACGGTTGTTAGCAGAAATGGAGCAGAAAGAGGACAATCTTCGCATATACCGTTTGACTGAACCGGTTGAGTTGCATGTGAAGGAATACGGAAATTTCAAGGCAGTAAATTTTGAAGGACCTCTGATTGTTTGAGGCGCGCGAACCCTAAGTGATGGCGAAATAGTGGGGGTGTTCGCGCTTTGGCCAGGTATCTGGCAAATATGAGAAATTCCATGCAGATTCTATTTTTCAGATCGCTTATTCGAACTAAGGGCAAGGGGTTCGCGCATTCGCAGGAAAATTTTCTGTTGTATGATGAAGTTGTAGTTGTACT # Right flank : GCATCTTCGGGATCGATCACCCCATCGGCCCAGGCCGTAGCGCCCGGCGAATTGGCTGTCCTTGCCACCGTAGCGCTGCACGAGTGTCGCTGGCGATAGCCCGGCAACTTTGCCAGCCTAGGCGAAGGTCAGATTGGACGGATCGATGGACAACATTTGATCCAGCACGGCGTCAAGGGGAGCTTCGTTAGATATGCTTTTGGATCTTGCCATGGATAATTTGTAAACGTATATTCATTTATAAAATCAATAGGAGGTTGGAACGAATGGCGAGAATTCTCGGCTATATTGCCTCAAGCCTTGACGGCTTCATTGCGACCGACGATGACAACCTGGACTGGCTCTTCCAATACAACGATATGGATTTGGGAGAACATGACTACAAGTTGTTTATCAAGGGTATCCGTACGGTTGTTATGGGGCGCGGCACCTACGATTTTATCGCCAACGATCCGACTCCATGGAATTATGGAGACCAAAGGGTTTTGGTTGTTACTTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCAGCGAACTGGCTGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTAGCGCCCAGCGAACTGGCTGGGCGAGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.40,-16.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.42 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //