Array 1 37-314 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPEQ01000028.1 Chryseobacterium sp. P1-3 Contig0028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 37 47 100.0 30 ............................................... AAGCCGAAGAAATGCGCAGTATGTGGAGGT 114 47 100.0 30 ............................................... TTCGAGGTTATTATGTTCGATTTCTCACGA 191 47 100.0 30 ............................................... GTTGAAACTCATCTGGCTGATATTCACAAA 268 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 100.0 30 GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Left flank : TCACAGCAAATCGTTTCTAACACATCGATAGTACTAG # Right flank : CCTCAAAATCTAATCCGTTGAATTTCAACGGATTTATTATTTATTTAGGATTTAAAAATTAGAATAATTCAAGCTGTTGAAACGTTGGAGGTGGCTCTTCTTTATTTCTGGCAAAAAAGATTTCAATATCTGCAAACTGCTTATCTGTAATACACATAATAGCGACTTTTCCAGCTTTAGGAAGCATATTTTTTACTCTTTTAATATGAACCTCAGCATTTTCACGGCTTGGGCAATGTCTTACATACATTGAAAACTGAAAAAGTGTAAACCCATCATCCAGCAAGCGTTTTCTGAACAAATTGGCATCCCGCATATTTGCTTTGGTCTCAGTCGGCAAATCATATAAAACCAATACCCACATAATACGGTATGCATTAAACCTTTCGGCGTTCATAGTAATTCAGGATAAGAGATCAAACGTTTTTCTCCTGTATAACATTTATAAAGGGAAGAAGCGGTCATTTTTACGGCAATAAGAAGCGGCCTTGTTTTTCCAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 601-15 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPEQ01000007.1 Chryseobacterium sp. P1-3 Contig0007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 600 47 100.0 30 ............................................... CTGCCAATGCGAGAAGCTTTTTACGTTTAC 523 47 100.0 30 ............................................... AGTTTATATCATAACAATAATGTCAGACTT 446 47 100.0 30 ............................................... AAACTCTGACAAAGCGTCTATAATACCTGC 369 47 100.0 30 ............................................... GTGAAAGTACAGTATTTGCCATTTCTGATG 292 47 100.0 30 ............................................... TTGTTTGTTCGGTTAAACCTTTAATAGCAA 215 47 100.0 30 ............................................... ATAACTGCTGTAAATCATCTTCTACGAATT 138 47 100.0 30 ............................................... GTACCTGTATTTTTTACGGCTCAATGGAGC 61 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 100.0 30 GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Left flank : GGATGTCAATATTTTCACGAATCTTACGAGAGGACAACATATCTTCTATATAAAAGATCAATACAACTGCGTTCCCGTAGCAGCAGAAATTACAGTTCCTAACCTGATAAATGCCATTACTCCAAACGAAGATGGTAAAAATGATAATATTGATTATTCAGCCCTGGCTTACAAGAGAAACCTTATTTTTGAAGTTTATGACCGGTATGGAAATAAGCTTTATGAGGCCGGTAAAATAAGAAACTTCAAATGGGACGGCACCGCATTTGGCAAGAAGCTTCCTACCGCCACCTATTGGTACACAATCTCATGGAATGAAAATAACAATGCCAACACCTCAGTCAGGTACAACGGCTGGGTACTTGTTAAAAACAGAGAATAATTCGAATGTATCAGCAAGAGTTAAGTCCCTTGCTTTAAGCTGGGGACTTTATTGGGTTGAAATCACTAACTTTGTGATTAACCACAACACAGAAAATACTATGAATATTGACAGAGTT # Right flank : CGGTTAGCAATTCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.40,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //