Array 1 20064-19234 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB446650.1 Eggerthia catenaformis OT 569 = DSM 20559 strain OT 569 acdBZ-supercont1.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================== ================== 20063 28 96.4 39 N........................... AATTCCTTTATCAGGAAATACAAGATAATGAAACTCATA 19996 28 100.0 39 ............................ GTATTTTCTTTTACTTCTTCCCAATTTTTAATTTTTATA 19929 28 100.0 38 ............................ AAGCTTGAGCAGGCAGGGCTTTGTTTTGATGCATTATA 19863 28 100.0 40 ............................ AATTTCAGCCACTTACTTTTAGCATATGAACCATCACATA 19795 28 100.0 40 ............................ AAAATAAAACTTGAGGATGTGAGCGATTTTTACACGCATA 19727 28 100.0 40 ............................ TCTACCTTTCCATTGTATCCATTTATTGCTCCACATAATA 19659 28 100.0 38 ............................ TACTTATATGCTGCAGTATTGTTTTCATGAATTAATAT 19593 28 100.0 38 ............................ ATCAGTGGCGATGGTTGTTATATTGAGGTCACTTTTAT 19527 28 100.0 39 ............................ GTAGTTCCTCTCTTTCCTTTTCATTTTTTTGAAACTAAT 19460 28 100.0 39 ............................ AAAACTAATTCTCCGGGTTCGATCCGATCACAACTAAAT 19393 28 100.0 39 ............................ ACATATTGCTCATTAGGCGATCCATATTCATCCAATCAT 19326 28 100.0 37 ............................ AAAAAAGCATAAGGAAATAAGAAAAAGAAGCAATAAT 19261 27 85.7 0 ...................GC.-.G... | G [19236] ========== ====== ====== ====== ============================ ======================================== ================== 13 28 98.6 39 TAGAATATAACCAAAGTGGAATGTAAAT # Left flank : ACTATAGATGTCATATAAAAGATGGAGATTAGACAAATGTTGAAATTAAAGGCAAAAAATGAGATTATAATTGTATAAAAGAATATTTTTCAAAGTAAAATAGTGCTAAAATTTGATATCGACAAAACAAGGTGATAAAAGTATTGAAATTGTTGAGTTATAGAGGTAACGCATATAGAATATAACCAAAGTGGAATGTAAATTCCTTCAGTTAAGAGCATAGAATTGCATAAGACATTATATAGAATATAACCAAAGTGGAATGTAAATTAATTCTCTTGACATTCTCTAACTCTAGAGAATTGAATATAGAATATAACCAAAGTGGAATGTAAATAATTCCTTTATCAGGAAATACAAGATAATGAAACTCATATAGAATATAACCAAAGTGGAATGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATAATAGGGATACAGAGGAAAAAGCTTGATAAATAGGAGCTTTCAGCACTGTATCCCTATTTTTAAAATCAAACAAAATATCGAAAAGGAGGCTTTTATGATATGTAAAAGAATATTTCAAGCCATTATGTCAGTTATTCCATTAGCAAAGGCGGTGGAGAATAAATGAGATGGATATTAAAAATAATTTTATTTCCGATCAGCCTGCTGTTAAGTATTCTTACTGCATTTTTAACATTCTTACTAAGCATAGGAACAGCGTTACTGTATCTGCTAATGCTGATGTGTGTATTTGCGGCAATAGGCTCGTTCTTTATGTTGCACAACACAAGAGCAGCAATAGAAGCACTCATACTCGGATTTCTGCTAAGTCCTTACGGAATACCGATGATTGGAGCTGTAATTATAGCTTTTATACAAGGAATCAATGAAGCCATAAAATCAATATAAAAAATTTTATAAAAATGGTTACCAAGGGCGATAGATAAAAACTATCGTCT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGAATATAACCAAAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 20227-20391 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB446650.1 Eggerthia catenaformis OT 569 = DSM 20559 strain OT 569 acdBZ-supercont1.5, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 20227 31 100.0 36 ............................... TCAATTCTCTAGAGTTAGAGAATGTCAAGAGAATTA 20294 31 100.0 36 ............................... AATGTCTTATGCAATTCTATGCTCTTAACTGAAGGA 20361 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 100.0 36 ATTTACATTCCACTTTGGTTATATTCTATAT # Left flank : ATATGCGTGTAAAAATCGCTCACATCCTCAAGTTTTATTTTATTTACATTCCACTTTGGTTATATTCTATATGTGATGGTTCATATGCTAAAAGTAAGTGGCTGAAATTATTTACATTCCACTTTGGTTATATTCTATATAATGCATCAAAACAAAGCCCTGCCTGCTCAAGCTTATTTACATTCCACTTTGGTTATATTCTATATAAAAATTAAAAATTGGGAAGAAGTAAAAGAAAATACATTTACATTCCACTTTGGTTATATTCTATATGAGTTTCATTATCTTGTATTTCCTGATAAAGGAATTATTTACATTCCACTTTGGTTATATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATTCCACTTTGGTTATATTCTATATGAGTTTCATTATCTTGTATTTCCTGATAAAGGAATT # Right flank : TGCGTTACCTCTATAACTCAACAATTTCAATACTTTTATCACCTTGTTTTGTCGATATCAAATTTTAGCACTATTTTACTTTGAAAAATATTCTTTTATACAATTATAATCTCATTTTTTGCCTTTAATTTCAACATTTGTCTAATCTCCATCTTTTATATGACATCTATAGTCGACAATTATATAAATAACGGATCATCAATCTCTTTCCCCAATATTTCCTTATCTAGCCACCTTTCATGTCTGCTCTTAAAGATAATAACAGAATCTAATTCGTTGTCAATCTCATTTTCAATCTCTTTTTCCAACTTAAATAGGTTTGCCTTCGTTATCTCTCCTTCAAAAACAGAATTTTGTACATGTACAAGATACTGCTTACATAATTTAAAAACATTATTCCAACGTTTTCTTCCCATATCTTCCTTAGCAATATCATAAACTAAAATAGCATACATATTACCACCATATAACGAATGACTCGTATTCCTTTTCTCCATATA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTTTGGTTATATTCTATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 58303-57482 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB446648.1 Eggerthia catenaformis OT 569 = DSM 20559 strain OT 569 acdBZ-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 58302 30 100.0 35 .............................. TAATGATGACAAAATAATTAGATTGAAACAAATTA 58237 30 100.0 36 .............................. TGGAATAAAAGTAGACATTGAAGATGATAAATTCTT 58171 30 100.0 35 .............................. TTTCAAAGATGTCACTTTCGGAACATATTATATTA 58106 30 100.0 37 .............................. TTGATTTACCTTGTTTTGAATTTGATGAAATGTACAA 58039 30 100.0 36 .............................. TAATATAGATATCATGATTGTTCTGTTCCTGTTTTG 57973 30 100.0 36 .............................. GTTCGAAAACTCTGAAAAGCTAAAAGCCCAACTTGC 57907 30 100.0 37 .............................. GCTTTGCTATAGGGACTATTGTCATTGAAAGATTAAA 57840 30 100.0 35 .............................. CGAGATAAGAGGACTAACAGACAAGCAGAATTATA 57775 30 100.0 35 .............................. TACAAGAATACAGGAACAACAGGCTGCAAATAGAA 57710 30 96.7 36 ....G......................... ACCGCACGGCAACAGAACCTTCCATATCCCCCGTAC 57644 30 100.0 36 .............................. ACAAAAGTCTTTTAATGAAAGCAATACATATTTTAT 57578 30 100.0 37 .............................. TCATGTCCTTAAATTTAAGAAACTTGTAATAAATAAC 57511 30 96.7 0 .....T........................ | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.5 36 ATTTACATTCCACTTTGGTTATATTCTAAT # Left flank : TCAAATCTCCAAACAATTCATTTTATAGAGCATATTGTGTCATAAATAAAATGTCATTCATCATAAAAACTTTAAAAATTAAAAACTTATATGTATCCCTATCCGACCACAAGACCACTTTGGTTATATTCTAATAAACGAAAAATCAAGCCGAAAACAAAACAATTCAAAATTTACATTCCACTTTGGTTATATTCTAATTTAAAATTAATCCGTGGTCATGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TATCTGTACATAACAGGTTTAACTGCGTGTACTGTAGATTTACATTCCACCCTTGTGTCAAGTATTGGATACATATTTTTTCAAATTTCCAATCAACTTTTTTTACTCTATTTTAACTTTAAAATTGGATTTTTCAAGAGCTTGTTTATCAGGTCTGCATATACTACTTGGTCAACTACTTCCGATATAGTTGTAATTCTTTGCCCTGCATCTTTGGAAGAAGCTCCGCAGTGGTATATCCTCTGCTTATCTGTATTCCAATCAATGATAATATACCTGTCATGGAACTCCCCTCCGGATTTTTGAAACTTTATCTTTCTAAACGGATATTCTTTACAAAAATCTTGGTATTCAAGTGTATGAAGTCCTTTACCAACATTGTCGCTGAATATAGTGATTTCTACCGATGAGGGTATATCCTTTAACAGTACAAGTGTCTTAACTCCGATATAGTTATCAACGATATAAATGCTCTTTTTTGCTATGCTGTAAATATCCTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTTTGGTTATATTCTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 61742-62103 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB446648.1 Eggerthia catenaformis OT 569 = DSM 20559 strain OT 569 acdBZ-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 61742 30 100.0 37 .............................. GACTTTACGGTATGATAATAACTACTGATATCTATTC 61809 30 100.0 36 .............................. TTGCTTCAGCAAGCTCATTCTGTTTAGCAAGATACA 61875 30 100.0 37 .............................. TCGTCATGAGAACAGTCATGAATACTGCAAATCCTTT 61942 30 100.0 36 .............................. CATAATCATTGATATCATTAGGAATCTTTACATACA 62008 30 96.7 35 .............T................ TAATGATACATAATTGCAATTTCCTTCATGTCCTT 62073 30 80.0 0 .....................CT...GGTC | G [62092] ========== ====== ====== ====== ============================== ===================================== ================== 6 30 96.1 36 ATTAGAATATAACCAAAGTGGAATGTAAAT # Left flank : GATGATGATACCAAAGAAGTTATAAAATCACCAGCTATTGAGCATGCTTTTAAGGGAAATGTTATAGTTTCAGTAGAAAGAATTATTCAGGAAAGTGAAATAGAATCAAACTATAATTATTTGGATGAAGATGAGGATTATCAAGAATTAGAAATTACGAATAATAATATAGAACAAATTTATGTAAATAGTAGTGAAGATATGTATTTTGATGAAGAGTTTGATTTTGAAGAAAAACAATTTAAAAGCGGAGTGTTTACTTGTCCTAAATGTGGAAAAATTTTCACGGATCATTGTGAGGATATGGGTGGATTTTGCGTTAACTGTGCTTTTGAAGATTAACAACATAAAGATGTAAAGTGTGATAGAGAAGTATATGTTTCTGATAAGAATAGGATTGAAATAATTAAAAAAAAGAAATTAAAAATGTATCCAATACTTGACACAAGGGTGGAATGTAAATTCATGTGCGATATAATCTGTATTCCACTTTAAACTCA # Right flank : CTGAGAGAGATACAGAGAGAAAAGCCAGATAAATAGGAGCTTTCAGCACTGTATCCTTATTTTAGAAATCGTGAAAATCAAATAATCAGGTCTAAAAGGAGGATTTTATGAGATGTAAAAATATTTCAAGCCGATATATTCGCCTTTTCGGTGGTAAGGTAAGAATGAAATGACATGGATAATTAAAATATTCTTGTTTTCAATTTCTACTAAGTCCTTACGGAATACCGGATGATAGGAGCAGCAGTTTATAGGTTTATTACATTGTAAATGGGGAATGAGTTATCATAAAGATATTGGATATTTTGAGAGAACAAAGGATATAAAATTTGCATTGGAACGAAAGAAAAATAGAATTTTAGCAATCAACTGGGGAACAAATATGATGAATATAAATAATGTTTGTTTCCCATAAAGCATTGAGATTTGGGGAATAAAATGGTACAATTTTATCAAGAAATGTTCTCCAAAGGAGTAAAAATAATGAATATAAAATATAA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATATAACCAAAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //