Array 1 258596-262385 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVGC010000005.1 Citrobacter braakii strain CB00127 CB00127_c0005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 258596 29 100.0 32 ............................. AAATATAGCGCCAAACATATCTTTTTCATCGT 258657 29 100.0 32 ............................. TTTGTGATTTATCTAGTGACAGGGATGATAAA 258718 29 100.0 32 ............................. CACGGCATACAGCCGCGTTTCGATTTCAAACC 258779 29 100.0 32 ............................. GGCGCGCCCGCGCCCTCTGGGACTCGTGTCAA 258840 29 100.0 32 ............................. TAGAGAGTTTATTAACAGTAGCCAATCAATTA 258901 29 100.0 32 ............................. GCGTCTCTCCAACAACCTCAAATACGCTTCCA 258962 29 100.0 32 ............................. TTCCGTGGGTTCCCAGGACTGACCCCTAACGT 259023 29 100.0 32 ............................. TACCCGGAGTTAACACGGCAAATCATTGAGGC 259084 29 100.0 32 ............................. CTAGCTTTCTTTATCATCCCTGACGTAGTTGA 259145 29 100.0 32 ............................. GTCAGTATGCTGACGCAGGATAACGCAGAACT 259206 29 100.0 32 ............................. CCGCCAGTTGATGATGTTCTCGGCAGTGTAGA 259267 29 100.0 32 ............................. CTATTGCGCGACAGCAGTTCTTCGCGGTTCGG 259328 29 100.0 32 ............................. GCCAGCGGCCTTTAAATCTTTAACGCGCGTCT 259389 29 100.0 32 ............................. AAATCGTATCTTGTCTGGCGGGAGAACATGCG 259450 29 100.0 32 ............................. CGCGGGAAGTTGTATCTCCATCGCGGCTGTGA 259511 29 100.0 32 ............................. CAGAGAGACAACCTGATCTGACATTGGGACAA 259572 29 100.0 32 ............................. ACATGCTGATGGATTGGATTAACTGACCGTCT 259633 29 100.0 32 ............................. ATAGTTCATGAAGATGATGCCAGCGAAATCAT 259694 29 100.0 32 ............................. AACAATATTCATACATCGTAATGCCCGCTGGA 259755 29 100.0 32 ............................. CCTAGAACAGCAGCTACGCGAACAGCTGGCAC 259816 29 100.0 72 ............................. ATGATTCATGTAATTCATAAAAGCCAGCGGGGATAAACCGACCCGCGCGGATTAATCGGGAGGGATTATTAT 259917 29 100.0 32 ............................. TTTGCGCAGACGTGCCGCGATACGCCTACGCA 259978 29 100.0 32 ............................. GCCGCAGCATTTGCTACCGGAACAGCAGGAAA 260039 29 100.0 32 ............................. AACAATCCCCAACGCTGACGGCCGCCAACAGC 260100 29 100.0 32 ............................. AGGAACGGGCCGACGCGGCTAATTCTTTGGCG 260161 29 100.0 32 ............................. GAATGCTTTACCCCACTCCATTACCAGTGCAA 260222 29 100.0 32 ............................. ACACCTCGAACGACGCGGTAATCTATGCCCGA 260283 29 100.0 32 ............................. TACTGGAGGCCGCCAAGGAGCGCATAGCAGAA 260344 29 100.0 32 ............................. CGTAACCTATCAATCTGTTAATCCTCCGCGAT 260405 29 100.0 32 ............................. TGTTTTAGATGATTAGTTGACTAATGAAATGT 260466 29 100.0 32 ............................. CAGTAATTGCGAGCCCGGCCGAAAGGTCGGGC 260527 29 100.0 32 ............................. GGCTGGGACATCATGTTCATAATTCAGGATGT 260588 29 100.0 32 ............................. CCTCATTAAATATAACACCGTCACTATCTATA 260649 29 100.0 32 ............................. TCTTAATAATTAAATGTCAGAATTGTGATGTT 260710 29 100.0 32 ............................. AAAATGATGAATGGTGGGGGAAGGGGGTTACA 260771 29 100.0 32 ............................. ACAAACAGTAGCAGGGCACCCCACACCGGGTA 260832 29 100.0 32 ............................. CGCGCCGAAAATCGGCGACCCGGTAACAGTGC 260893 29 100.0 32 ............................. TCACCGGGCTGACGTCAAATAGCCGGGAGCAT 260954 29 100.0 32 ............................. CCACCCGCAAAAAAACGGCCGCAGCCGTTCTG 261015 29 100.0 32 ............................. CTGGCCGACGCCGATTTGCAGGCCGAGCTGCT 261076 29 100.0 32 ............................. TCGATTCGTATGTCTGCCAGTTCATTAAGGGC 261137 29 100.0 32 ............................. ATTGCCGCGCTGAGCCGTCAACAATCGACAAC 261198 29 100.0 32 ............................. GCCAGTGTTAATTGTCCGCGCGCGTCCTCCAG 261259 29 100.0 32 ............................. CCTCAGCGAGTGTGAATGTTGTGGCAACGACA 261320 29 100.0 32 ............................. CCAAAAAGCGCATCAACGGCGTACGCGGCAAT 261381 29 100.0 32 ............................. TTAGGCACCTGCGGCCAGTGATTAGCCAGCAC 261442 29 93.1 32 ........T.T.................. GAGGCGAATGATGGCGGCTACTGGTCAACTGA 261503 29 100.0 32 ............................. ATGCATTCAATGAACTGGTAAAGGCCCCGAGC 261564 29 100.0 32 ............................. GGCTACGTTTTTAGCGTAACCCCTTGTTTTAT 261625 29 100.0 32 ............................. CTGTAAACGCCAAATCACGCACACTGGTCGCT 261686 29 100.0 32 ............................. CAACGTAGCTAAAGAGATCGGAGTCGATAAAG 261747 29 100.0 32 ............................. GGATTTAACCATTGCTACGATACCTGGCTGGC 261808 29 100.0 32 ............................. CGATCTGCCCCCTTCCCGGGTTGATAATGTTG 261869 29 100.0 32 ............................. CATTCCCTGCGCTATAGATGCGCGATGGTGTG 261930 29 100.0 32 ............................. TAATGCAATGCCGTGTTTTTACGCTATATTCT 261991 29 100.0 32 ............................. CGCGTGTTGGAAATAGCACTGGCAGCACTAAC 262052 29 100.0 32 ............................. CGCCGAGCCGAGGGGCAGGCCGCAGCATTTGC 262113 29 100.0 32 ............................. TTCCTGTTTTGGGGTCTGTGACGTATCAGGAC 262174 29 100.0 32 ............................. CGCATCGATATCCTTCTTGTTCCTAATTTTCA 262235 29 96.6 32 ..A.......................... TGCAGGGAGCTGGCGGCTGCGAATGTGGGACT 262296 29 100.0 32 ............................. ACCAGTGGTTCTCCTCCTTTATGCTGCGTATC 262357 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ======================================================================== ================== 62 29 99.7 33 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAGGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCAATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCTTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGTGGTTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //