Array 1 27310-27522 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011095.1 Corynebacterium ulcerans strain 131002 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 27310 29 100.0 33 ............................. GTGATATCGGCAGCACCTGACAAGGTGAATCCG 27372 29 100.0 32 ............................. GTCGCATCGGTGCGATTGAGACGTGTGAGAGC 27433 29 100.0 32 ............................. ATTTCAATTTCCACGCGGTCGGTGAAGATGCC 27494 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 4 29 100.0 33 GGAACTACCTCCGCATACGCGGAGAAAAG # Left flank : ATTCGCTTTCACTTTTGAATTTTCAAATAACCTGCACTCCCCCAATATGCGAGGGGGTGCGTAGTGCCCGGCGTGGGAATCGAACCCACGGGAAACCATTCGGGCTTTTAATTTTTAAAAGATCGTGTATAGTGGAACTTGGTTTTGGCTAAGGCCCCGGTTGTGGTGACTGGGGCCTTTTCTTTTGCCCATTTCCCGCCAGTTGTTAAAGAAGCTCGTCTGCGGATTTCACAACACCATGATTGACCAGCGTTTTTATCGCCGCAAAAACTTCGTTGATCTTGGTAGTCTTCACGGTGGTGTTATCCCCTTCAGGCCACACCAGAGGGGCACTACGCTGCACAATCGCCTTATACCCAAAGGATTCAAGAAGATCAGCGCGGGCCTTAGCCCCAGAGCGTGATTGATAAATCTTCGTAGTGGAAGGCTCAATAAAAGCATTAGTATTGAACCGATCAGTATAATCCTGCATCGGTATCCAGCCTTTAGAGACTACGCTT # Right flank : GCTAAATAACCTGCGCGTTTACTCACTCTCCGGGCAAAAATCCTCCAAAACTTCGTCTGGAATAATTGCATCGGCTTCATCCAGGGGGTCAGTAAAACGCACGTCTTCTATTAGACCACGAGCAGAGAGGAAAAGGCCATCAATATCAACGACGGGGCGCCGTTGTTTTCCTGTTGTGCGGATTCTGAACCCTTGCTCAGCATCATATTGTGGGTGAATCAGAGTAAGAGATCCTGCTAGGTCTACGGATTGGCATTTTTCCCAAAGGTTTTCCATGACAGCTCTGGATAGAACTCCTACATAAAGACCTGCGTCTACTTCGGAAAGGAAGCGACTGAGGTAGCCGTTGAGGTGGTTCGGAAGGTTATGTCCTTGGATGACCGCAAACATTTATTTACCACCATATTGTGTGTGCCCTGGGACTTCGTGGTTTCTTCCGCCGATGAGGCGGTCGTCGGTACGCTCGGGGAGATGCGGAGTGAGGATCTCCATCATAATGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCATACGCGGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 1891938-1893065 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011095.1 Corynebacterium ulcerans strain 131002 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1891938 28 96.4 33 A........................... ATATGGACGTGCCAATCAACCTCAAACCAATTC 1891999 28 100.0 33 ............................ ACTTCCATCCATGCTCTGCCCGTGCGCACGAGG 1892060 28 100.0 33 ............................ CTTTTAATGCCGAGCTAGTTATGCGTGATCTTT 1892121 28 100.0 33 ............................ CCCCAGGAAACCCCACAAAAACACGACTCAAAT 1892182 28 100.0 34 ............................ ACGGCACCCTAGGTGAAAGCGAAGAGCTGGCGCC 1892244 28 100.0 33 ............................ CGCTGTCTTTTGCGAAATCCAAAAGCGCTGACG 1892305 28 100.0 33 ............................ CCTACCCACTGTGTTAAGTAGGTGGGAGCCGTG 1892366 28 100.0 33 ............................ CTGCCCCGCTAGGGGCGTGGGTGGCTGGGTGCT 1892427 28 100.0 33 ............................ CAATCCCGGTGGTATATAAGCTCGTCTAGCTCG 1892488 28 100.0 33 ............................ CAAAGGCAATGCACGGATACCCCGCGCTCCGGT 1892549 28 100.0 33 ............................ CGCCTACAGCTTCCACGGCTGCGTTAGCCGTGT 1892610 28 100.0 33 ............................ CTACCTCAGGGGCGACTTTAGTGACGCGGAGTC 1892671 28 100.0 33 ............................ CGAGGTTGTCGGTGTCGCGGCGTCGGTTATCGC 1892732 28 96.4 33 ................T........... CAACACGGGAGTTCCACTCAGTCAGCGTCACCT 1892793 28 100.0 33 ............................ CGAGACTGACGCGCTCGTATATATGACTAAGCG 1892854 28 100.0 33 ............................ CGACGACACCAATTGAGGTTGATTCCACCGCTG 1892915 28 100.0 34 ............................ CAACGTCAGGGGTGGTTTTCCTAGTCCAATCGCC 1892977 28 96.4 33 T........................... CAGCGGCCCCCTCACCCTGCAAGGCGGTGGAGC 1893038 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================== ================== 19 28 99.2 33 CTTTTCTCCGCGTATGCGGAGGTAGTTC # Left flank : GAACACCGCCAGCCCGAGAAACCCCCGAAACTGCGACTGCTCAACATCAAGGATCTGCACGCCATTAGCAGCTAACACTCGGAAAGCTGCTGCCGACACTCCCTGTCGATCCTGGCCTGAAATAGTAATAACAGCCGGGGTCAACTCTGGGCGAAGGCTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTCGCACGAAGCCTTTCAAATCCTCCCAGTGCTCCCCTATTTAGGAATGACGGGCTCCGCATCAACGGATGCGCACTTTATCCTCTTCCTACGGATCGAATCGCCTTATCTTTCGACCTTGTGGTTCTATGCCTTCCCTTGGATATTGCGGGGGTATGCAATAGTCTTTCCCACTTTTGTCATGGTCTAATAAGGGAGGCTAGTTTTCTCACCGATTGTATGGAGTTAATGTGCTGATTCCAGACGCAGTTTGGACTGTTTTTGACTTCTTTGGCGAGTAAACGCGCAGGTAAGTTAGT # Right flank : CATAGCTTAATACTTGCTAGATTAATAACTTATGTCAACTACGGAGGTATAAATGTCCATCCCACCAGAACAAGTCATGCAGCTTTTAGGTGAAGGTATGACCCAATCCCAGATCGCTAGAGAATACGGGGTTACTCGTCAATACATCTTCATACTTGCCAAGCGGGCCGGTCATGAGGCTGCGGAGCAGGAATATATTAAAGACGATCTGCCGTGGGCCGATATAGACGAGACACATAAGGATAATACAATCTTTAAAGCTTTGCGCATGCACGCCCGTTATATGGAACGGGGGCAAAAAAGTTTGCGTGGTTCGAGTTGTGTTAAACTGCTCGGCATGTATCGAAAACTTGTTCGATTCAATCAAGTTATCGACTACGACGAGTCCTACCCACCCGTAAAAGGTTTATCAAACACGGGCGGGTTTATGTATGTACCAAGGTCTCCAGAGGATGGGAACCTCATCATCAAAATGAAGCCCGGCGTGCGGATCACGAAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTATGCGGAGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //