Array 1 33161-34067 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851065.1 [Clostridium] clostridioforme 90A4 acsNX-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 33161 33 100.0 34 ................................. AACAAGGCCCTGGCGGAAACGCCAACGACCTACC 33228 33 100.0 33 ................................. TTAACAATGTACTACTTCCAATTTCAAAATGGG 33294 33 100.0 37 ................................. TAATATTGCTATTGTGTAATTCTCAAAAAAATGCTAT 33364 33 100.0 35 ................................. GGACCAGCGCATCCATCTCAGGGTATCCTCTCCTC 33432 33 100.0 33 ................................. CCCCTCCATGGTCAGGGCTTCCAGGCGGATGTC 33498 33 100.0 34 ................................. TGGAGAAACAGTCGGAGTATATCTCCTGCGAGGG 33565 33 100.0 34 ................................. CTACAGGAACGCAGGAGCCGGCCATCCAGGAGGG 33632 33 100.0 34 ................................. ACTGCAACACTATCACAATGCCAAACTCCGACCA 33699 33 100.0 34 ................................. CGTATACTCAGACGGTCAGTGTACCGGGAGCAAA 33766 33 100.0 35 ................................. TGCAAAGGATGGAAAAATGCAAGAGGTTGCCGGAT 33834 33 100.0 33 ................................. CTAAAAATAGGTATAAAAAATACAGCTCCGCAA 33900 33 100.0 34 ................................. ACACTCATGTCGAAAATCAACATCCTGATAGTCT 33967 33 100.0 35 ................................. TGTGTTAGAAGATGCGAAAGTCTATGTTGGTTGGG 34035 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 14 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : CTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTATTGCGCATTTACGATGTCAATGATAAGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGTCCGGGAGATTCGCACCTGAAAAACAGAGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGGGGGGGGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TTGTCCGGTAGACTTATATATATACTGCATGGGACTGTCGAGGCCCGCGAGGGCCTTGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATATAGCCTGTGCCACCTTCCACCAGGGAAGGCCGTGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATACAATATGCAAACAAGGTAACGTTTTTTGATACCCGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATCTGTTCTCATGGTTCTTTCCTTTCCGATTCTTGTTGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATTGCCAAACTGACCAATTACCGGATTGAGCAGCTAGAGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATTTTTTTAGTCCCTGGTGAGGAGCCCGGCTGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 34230-34668 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851065.1 [Clostridium] clostridioforme 90A4 acsNX-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 34230 33 100.0 34 ................................. ATAGCCTGTGCCACCTTCCACCAGGGAAGGCCGT 34297 33 100.0 35 ................................. ACAATATGCAAACAAGGTAACGTTTTTTGATACCC 34365 33 100.0 35 ................................. CTGTTCTCATGGTTCTTTCCTTTCCGATTCTTGTT 34433 33 100.0 36 ................................. TGCCAAACTGACCAATTACCGGATTGAGCAGCTAGA 34502 33 100.0 34 ................................. TTTTTTAGTCCCTGGTGAGGAGCCCGGCTGGAAA 34569 33 100.0 34 ................................. ATCCCTCATTGCCTGGAACGCGTCTCTCGCCGTA 34636 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 100.0 35 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : ATCGTATACTCAGACGGTCAGTGTACCGGGAGCAAAGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATTGCAAAGGATGGAAAAATGCAAGAGGTTGCCGGATGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATCTAAAAATAGGTATAAAAAATACAGCTCCGCAAGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATACACTCATGTCGAAAATCAACATCCTGATAGTCTGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATTGTGTTAGAAGATGCGAAAGTCTATGTTGGTTGGGGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATTGTCCGGTAGACTTATATATATACTGCATGGGACTGTCGAGGCCCGCGAGGGCCTTGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCCGATTTCGTGATAGGCCTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTAACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGCAATTACCTAATGCAGAACCATTTCTGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 129126-128851 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851075.1 [Clostridium] clostridioforme 90A4 acsNX-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =============================== ================== 129125 32 100.0 28 ................................ GGTCTAAGTAATACCACTGTCCTCCCAG 129065 32 87.5 28 CCT............................C CGTCCAGATAATACCATCTTCCATTAAT 129005 32 81.2 28 ...............CT....TT.A......C CGTTCATATAATACCATTTGCCGTTGAT 128945 32 78.1 31 ...............C.T...GATA...T... ACGGATTCAGATAATACCAGGTTCCGTCCAG 128882 32 71.9 0 CTT...............A...TA...CT..T | ========== ====== ====== ====== ================================ =============================== ================== 5 32 83.7 29 GGCCTGCCAGCCGGTGAGCATAGCGCCGCTGG # Left flank : TGACCGTAATACCTTCAGACAAGCGCTTTCCCAGGGCCAGACGTGTCCCGCGCACCTTGATGATAACGCTTCCGCTGCCTTTCTTATTCAATATATTCACCGGCGTCCCCTCATTGACCCCCAGGGCCTCAAGACGTCTGGTAATACTCTCATCCACTTGCACGCCCGATACTACATACCGGCCGCCGATTTCACACTCGTTCAGCTTTTTCTGCATTGCTGCCTGTCTCCTTTTGTAGTTGCATTTTAACCATATTCATTGTATGCTTATTGCGAAAAAATGTCAATAAAAAGAGTTTGTTATGACAAACTCAATTTCAAAAAAGAGGATGCAGCGAATCTCTCCGCTGCATCCTTTCTATACGTTTCGGTTCTATTAATATTGATTTTAGGCTTTACTGCACCCAAGCTCCGGAACCATCCACATATTTTCCATCCGGCGTCCATGTATTATAATACATGGCTCCGTTGGTGCCCAGATAGTAGTACTTGCCATTGAT # Right flank : TATTAAAATAATACCATGCGCCGTTAATCTGCTTCCAGCAGGATGCCGGATATCCGCCTGTATCATAAGCATACCACACGCCTGTACCGTCCTGCTCCCAATGCCCGCTTCCGCCATAGCGGCCAAGCTCATCCTCATCAATATACAGGGAGCTGGAATCCTCGGACCATTCACCTGTCTTATTGTTGTAACGGGAAATGGCCCTTACACGGAAGGTATAGTCTCCTTCCCGGTTAAAATAGCCTGCAAAGTTATAGGAGGTTCCTGTGGTGCTGACCGTAGTGACTGTCTTGTCGTCACGGAGGAGTTTCACATCGTAGCTCTTAGCGCCCTCAATCTCCTCCCACTCAGCCGTGGTGTCACTCCACTCCAGATCCGACGCGCCCTGAAGCTTACCGCCGATACGTTTTAGCTCAGCATACACCTCAATGTACTGGCCATCGTCATAAATCTTTGCTTTCTTGAAATCCGCATTACATCCGGAAAGAGAGAAATGGCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.19, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTGCCAGCCGGTGAGCATAGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 123812-125705 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851086.1 [Clostridium] clostridioforme 90A4 acsNX-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 123812 32 100.0 34 ................................ ATCAATCAACGAGTTTCACCTCCGCCCCGTCCAG 123878 32 100.0 34 ................................ AACAGATATGAAAGAGGACTTCGTGGAACCTCTC 123944 32 100.0 34 ................................ TTCAAAATCGCCAGTCCATTTACCCCTATGGAAA 124010 32 100.0 33 ................................ TCCGCCTCTGCTATAAAACCTATCTTGTCAGGT 124075 32 100.0 34 ................................ ATACGGTATCTCTCCGCTCTCGCACATCTCATGG 124141 32 100.0 36 ................................ CACCTGGGCCGGGGCCATGGATGCAAGGTCCAGGAG 124209 32 100.0 34 ................................ CGTCAAGTATGTCGGATGTGGGAAAACAGGCTAT 124275 32 100.0 35 ................................ CCCCAGGCGGGTACCGCAATGGTATCCAGTCATGA 124342 32 100.0 34 ................................ ACCCGAGATGTCCAGAAGGTTACTTTCCAGCCTT 124408 32 100.0 35 ................................ ACAAACCTTAAGGTCACTGCTTACAACGCTTATGC 124475 32 100.0 36 ................................ ATATCTTTCCCTTTCCGCCCTTCCGGGCAATAAAAT 124543 32 100.0 35 ................................ AAGCGAGTGAATTAAGAACAGTAAAAGTGCGCAGA 124610 32 100.0 34 ................................ ACAAAGATGACCACGCGCCTGCGGGATGGTGGAT 124676 32 100.0 36 ................................ TACCTCTAACATCATAAAGGTAAGGGTGCCCAAACA 124744 32 100.0 34 ................................ AAAGTAGTAGTAGACTTAGCATGTCCCAGGATAC 124810 32 100.0 33 ................................ CCTACAAGGAGCGCATTATATACTCTTGCTTGA 124875 32 100.0 34 ................................ TGTACTGAATAAGAGTAATACCCCCGCTTGCCAC 124941 32 100.0 34 ................................ CTCGAACCGAAACGCCTTTAATGTCGCCGTCCCC 125007 32 100.0 35 ................................ TCCACAATCTTGACAATAGTCTTGCCCCATCTCAA 125074 32 100.0 33 ................................ TTGTGCAGTATTTCAATGCGGTGTTTCTGGTAA 125139 32 100.0 35 ................................ GCTATTATCTTTTTTACCTCACTTTCGCTGATTTC 125206 32 100.0 37 ................................ CCTTCCTGGCCGTCCTGCCCTTCCTTGCCTGCCTGCT 125275 32 100.0 35 ................................ ATCATGCCGTTCGTGATTCCCACGCCCGCCGCCGT 125342 32 100.0 34 ................................ CCTCACGTGCCCGTCCCCGGCCGTCTGGTACTGC 125408 32 100.0 34 ................................ ATCCATTAACTGAGCCGCAAGCTCACCCGTCTGC 125474 32 100.0 34 ................................ AGACCAGCAGACGGCCGATTTTATCAATTGTGTC 125540 32 100.0 36 ................................ ATGGACATGTACCGGCTGGCCGTTGACTGGCTTATG 125608 32 100.0 34 ................................ CGCAATCCGCAGTGCACCTCTGGCATCCGTAATC 125674 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 29 32 100.0 35 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TTCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGAGCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //