Array 1 84578-84190 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFNY01000012.1 Acinetobacter baumannii strain 4300STDY7045863, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 84577 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 84517 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 84457 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 84397 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 84337 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 84277 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 84217 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 89666-92635 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFNY01000012.1 Acinetobacter baumannii strain 4300STDY7045863, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 89666 28 100.0 32 ............................ ACGAGACGCTTGAGGTCGGAAAGGCTGTATGC 89726 28 100.0 32 ............................ TTCAATTGACACCATTGCGAAGCCGTGACCAT 89786 28 100.0 32 ............................ GTACTCGTCAAGAATGAGCAAGTCATAGGTTG 89846 28 100.0 32 ............................ TGAAATGATGCTTGATACAAGTAATTGAGTTG 89906 28 100.0 32 ............................ TTCTACAAACTTGAAGATTTATATGTTGAGGA 89966 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 90026 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 90086 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 90146 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 90206 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 90266 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 90326 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 90386 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 90446 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 90506 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 90566 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 90626 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 90686 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 90746 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 90806 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 90866 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 90926 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 90986 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 91046 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 91106 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 91166 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 91227 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 91287 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 91347 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 91407 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 91467 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 91527 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 91587 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 91647 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 91707 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 91767 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 91828 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 91888 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 91948 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 92008 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 92068 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 92128 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 92188 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 92248 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 92308 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 92368 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 92428 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 92488 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 92548 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 92608 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGACATTCAGACTTTAACAATAAACTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGATATTCGTCTTGGCAAGCACCAATGACAATAGAAGGCTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACTCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGAAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGTTAGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //