Array 1 158683-157553 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMVD01000003.1 Lactiplantibacillus plantarum strain SF2A35B Contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 158682 28 100.0 33 ............................ CACAAGTACGGTGTCCTTGTAGCCTACGCAAAA 158621 28 100.0 33 ............................ CAGTTTTACAAATTTACCAGCCGCCGTCGAAGA 158560 28 100.0 33 ............................ TTATTCACCCTCATCGATATCAGGTTCGGCATT 158499 28 100.0 33 ............................ TACTATCAACTGAAAGACCTGTACCATCATGTA 158438 28 100.0 33 ............................ CTAATATCAAAATCTAAGTTATGATAAAATAAT 158377 28 100.0 34 ............................ CAAGAAGACTTATTTACAATTTTTACAAGCCTTA 158315 28 96.4 33 ......................C..... TAAGCCGTAAAAATATATATCGTTATGATTGGA 158254 28 100.0 33 ............................ TAGCAGTTATCAACCGTTAAACCGGCCGATCAG 158193 28 100.0 34 ............................ CATCAGGAACCGGCTTATTAGTAGCTTTGATTTG 158131 28 100.0 34 ............................ CAATGAAGCAGACAAATTCTTAAACGATGTATTG 158069 28 100.0 33 ............................ TAATACGGGTAAAGGCGCAACCGTTGATCCGCG 158008 28 100.0 33 ............................ TGTCTCGCCCCTCGTATAGAAGCAGTGATGCGT 157947 28 100.0 33 ............................ CCTGCCAGGGAGATAATTGCAGTTAGTAGGCTC 157886 28 100.0 33 ............................ TGGTCAATTAACGGGTATCGCTGAACAGGTTAA 157825 28 100.0 33 ............................ TCATTATCAACATCTCCATCTTTCTTCACATAC 157764 28 100.0 33 ............................ TGGTCCCGTCAGCGCTAGTCGTCTCATCTTCGT 157703 28 96.4 33 .C.......................... TAAAGTGTTGAAAAAATCAAGAACATTCTTGTT 157642 28 100.0 34 ............................ CGACCTTGATAAATGGGTGCGCTATTCCTTGGAG 157580 28 92.9 0 .......................A...T | ========== ====== ====== ====== ============================ ================================== ================== 19 28 99.2 33 CTGTTCCCCGTGTATACGGGGGTGATCC # Left flank : GAAAATCGGCGCCCAATCGACCTTAAAAAACTAATCAAGAAACGTGGGACATTTGCTTGGGAATGGATGTACTCAAAATCCTACTACCACACGGCCGACATGATTAGTCAGCACGATATCTTAGAAACCATTGCGGGTTTGCTTGACCGTGGCTTGCTTCAAAGCACGCTATCACAGACACTACGGCCAATCAACGCGCTTAACTTGCGGCAGGCCCATCAACTTATTGAGCAGCATCATATGATTAGCAAGGTAGTTATTGATGGATGGGAATGAGTTGACGTGTATTACGGCTCACGCGATAATGATCAACTTTAACTCGCCAAATACGCTGTCCTGTTCTGTCTTTTGATGCTTACAACTGATGTTGCACTCCAATGGAGAAATTATTGATATTCTTGGAGCCATACCTTATAGTCAAAGTAGTGGCGATTTTGCAAGTTAACTAAAATTCCTTGTTTTGTTATTTTTGATTGTTGATTTACCGGGATTTATTTAGT # Right flank : AGGTCATTAAACTTTCCAGTCCGAACCAACGTCAAACCTATGGTATCAGATGGTATCAGACTCGCTTATTTTAGCATCGCCCCCCGCTAAACTACCAAACTTTCTTTTTCAGTTTCCAAAATATTAGTGCTATGATGATAGCATCAATTTGACTAAAACACTTAATCAGAAAGGACTTTAAAATTGGCATTTAAAACACCACTGGCTGATCAGATGCGCCCGCAATCATTGGAACAGATGGTCGGACAACAGGATCTGTTGAAGGCAGGCCAGCCACTACGCCAGATTATTGATCAACATGTTAATATTCCACTCATTCTGTGGGGGCCGCCGGGAACTGGCAAAACTAGTTTGGCGCAGATTATTGCGAGTCAAGACGATTATCCATTCGTGGCTTTTAATGCTTCGACCGAAAATAAGGCACAGCTGACGAAAGCCATCGCACAATACCCAGAGCAATCGTTTGTTCTATTAATTGACGAAATTCACCGAATGACTAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGTGTATACGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 161792-161093 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMVD01000003.1 Lactiplantibacillus plantarum strain SF2A35B Contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 161791 28 100.0 33 ............................ CAACTATACCAGATTTTAATTATTTCCCGTCTT 161730 28 100.0 33 ............................ TATCAGTAATCATGTCAGCCGTGGCGTCTAATA 161669 28 100.0 33 ............................ TCTTCTTTTGCCAAAGGTTTATCATCAACAAGT 161608 28 100.0 33 ............................ CAACTATACCAGATTTTAATTATTTCCCGTCTT 161547 28 100.0 33 ............................ TATCAGTAATCATGTCAGCCGTGGCGTCTAATA 161486 28 100.0 33 ............................ TCTTCTTTTGCCAAAGGTTTATCATCAACAAGT 161425 28 100.0 33 ............................ TTGGAAACCGCCCCACCGACAAGCGCGCCCCCG 161364 28 100.0 33 ............................ CGGCATGTAAAGCTTCGGTTTAATAACATCAAA 161303 28 100.0 33 ............................ TACGACTTAACTTATGATGATTCAACATGTCAT 161242 28 100.0 33 ............................ CCTTCGGCTTGTCACTCTCTAACGTGTCACCGT 161181 28 100.0 33 ............................ TGGCGCAGTTGCCGGTTTGATTGTTAGTGCGGC 161120 27 89.3 0 ...............G.A...-...... | T [161095] ========== ====== ====== ====== ============================ ================================= ================== 12 28 99.1 33 CTATTCCCCGTACATACGGGGGTGATCC # Left flank : TAATAATTGCTGCGGGTACAAAAACCACGCCACGAGCATCACTGACTCGAATCGCACTATCTTGGCGATCGAGTTTGGCATGTTCCAAGTATAAAAATGTTAATCGATCATGAATTCGACTCAATTCTGACAATTCTGGCTTTTTTGCTCCAGATTTTTTCATTAGTACTGCACCTCCAAAATATCTGCATCAAGTTCACACAGTTAACTCTCAAAAAACAATTTTTCCATGAGTAAAGAACATAATGCGCTTTTAAATATAGGATAAGTATTGGTCAAACGCGAAAGAATACGCTTGCATCTTGCTGTAACCCAGATGCTCAAAAAAACTCAGAGTATCATATTTCATCAAAATCAAAATTATCGCGCCTTCATAATTATAATATCATAATTCATTTGCCATAAAAAACACATATATGTATACTTATATGAGATACAAAGTTAACTGAAAATTGCTCATCAGCTCTTTCATATTATTGATATATCACCATTTCTTTAGT # Right flank : GCCTATTTGTTCGACGGGAATTTCTTCCCCGCTACAGGAAACCCATATTTTAATAAAGATTCAAGTCATCCCTAATTATACTGTTGAACATGAATCCAGTTGGATCCGGTTAGCCATTCGCAACATATATAGAAGAAGGTGAAAAAAGTGTTTGAATTACTTGAGGCTATTATTGACATCATCAAACATTTTGGAATGGCACTTGTATTAGGATTTTTAGCATATGCTCTAATTTATATAATTATCGGTGTATTTACGATGAATTAGATACGCTACTTTCCATAACATGAAATGGAATCTTCAGTTACTCTTTGGCGTACTTTCTACTTACTAATGCTTAATTTAATCCTTTATCTTAATCAAAAAGTATTGACGAAATATAGACATATGCAAAATAATTTCAAACCAGTCAAGATCAAACCAACTTGCTGGCTATATTTTCTAGTCGACCCATTTCGTTTCACATTTTAATTCAGCCTGATTATTGCAATATTTTCTTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCGTACATACGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 3 164642-164064 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMVD01000003.1 Lactiplantibacillus plantarum strain SF2A35B Contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 164641 29 100.0 32 ............................. TGTATCCAATTCTGGACCGTATTTTACTAGTT 164580 29 96.6 32 ............................A AACATTTGCCCCGCGTCATAATATCTTTTTAA 164519 29 100.0 32 ............................. AAATTTCTAATTTGTATTCGTACGAACGAAAA 164458 29 96.6 32 ............................C ATAGAATGTTTGGACTCCATTTACTGCAAGTA 164397 29 96.6 32 ............................C AATCAGAACCGGTTAAACCGGCTGTAAAGGGG 164336 29 100.0 32 ............................. GAAACCTCTGTTACTGTGATCAATGGTTATGG 164275 29 96.6 32 ............................C ACTTGCCGCACGGCATTTTCATACTGACGAGC 164214 29 93.1 32 ..............C.............C GGTTTCAAAGCCGCTAAAGACACTAAGTCTGG 164153 29 96.6 32 ..........................T.. AAGCAGATTGCCACGTTACAAGAAACCATCAA 164092 29 86.2 0 ...............A.......A.C..A | ========== ====== ====== ====== ============================= ================================ ================== 10 29 96.2 32 CTATTCCCCGTGTATGCGGGGGTGATCCT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA # Right flank : AACAAAGCCATAGATAAAACAACAAATCACTTTCGAACAACTGCGACTTCACAAATATAAAAGTGCATATTTTACACATCAGCACTACAAAGTCTCACTAAACGTTTAAAGAACCGTCGTTAATCAACTTATATGTTAACTCCAGTGTTGCCTTAGCATCTGAAAGCGCATTATGTGGCCTTAAGTTCACAATTTGATAATCTGCTAATACCGTTGACAGGCGATAATTATCCAAGAAGACATTTGTGCGTTTTACAATGGGCATGAGATCTGTTGTGTGATTGGTCAGTCTTTCTATGTCATTTTCTATAAAAGCTTGCTTCAAGAACATTTCGTCAAAATGGAAATTATAGCCTACGATTACACTATTACCAATAAAGACCTTCATTTCACTCAACGCCATAGCTATCGAAACGCCTTGCTCATTAAGCATGTCACGTGTGATTCCAGTAAGCGCAACAATTTTTTGGGACAACGGTCGATCAATTTTTATTAGTCGG # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCGTGTATGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 168041-167890 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMVD01000003.1 Lactiplantibacillus plantarum strain SF2A35B Contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 168040 29 100.0 32 ............................. TGTATCCAATTCTGGACCGTATTTTACTAGTT 167979 29 96.6 32 ............................A AACATTTGCCCCGCGTCATAATATCTTTTTAA 167918 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 CTATTCCCCGTGTATGCGGGGGTGATCCT # Left flank : AACACAAAGCGAGCCTTCAATCGAAGGCTCGCTCTTTTGTTGTACGGGTCACTGCTGCATTCAAGCCAAGGATCATACCCCCCGCATACACGGGGAACACATCAAAGGTATGTCTTCCTCTGTAACTGGTGGAGGATCACCCCCGCATACACGGGGAACACGGTAACCTTTTGACTGAGTGTATCAATTGTTGAGGATCACCCCCGCATACACGGGGAACACCATTATTACCTAATTGCGGATTGTCAGTGGCTAGGGATCACCCCCGCATACACGGGGAACACCCGGCGGTAAACTTGAAAGCGTCGTTTTTGATGGGATCACCCCCGCATACACGGGGAACACAACCGTTCCGGCTTGCAGTAAAGTAACTAACGGGGATCACCCCCGCATACACGGGGAACACTAATACGATTGTTGACACGGTTGATACCATGTAGGATCACCCCCGCATACACGGGGAACACTGACCGGAGCAACGCCGAACAGTGGCGGGCTAA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCGTGTATGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 168074-168471 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMVD01000003.1 Lactiplantibacillus plantarum strain SF2A35B Contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 168074 28 100.0 33 ............................ TACATGGTATCAACCGTGTCAACAATCGTATTA 168135 28 100.0 33 ............................ CCGTTAGTTACTTTACTGCAAGCCGGAACGGTT 168196 28 100.0 33 ............................ CATCAAAAACGACGCTTTCAAGTTTACCGCCGG 168257 28 100.0 34 ............................ CTAGCCACTGACAATCCGCAATTAGGTAATAATG 168319 28 100.0 33 ............................ TCAACAATTGATACACTCAGTCAAAAGGTTACC 168380 28 100.0 33 ............................ TCCACCAGTTACAGAGGAAGACATACCTTTGAT 168441 28 100.0 0 ............................ | GTA [168463] ========== ====== ====== ====== ============================ ================================== ================== 7 28 100.0 33 GTGTTCCCCGTGTATGCGGGGGTGATCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATCACCCCCGCATACACGGGGAATAGTTAAAAAGATATTATGACGCGGGGCAAATGTTTGGATCACCCCCGCATACACGGGGAATAGAACTAGTAAAATACGGTCCAGAATTGGATACAAGGATCACCCCCGCATACACGGGGAATAGTTAGCCCGCCACTGTTCGGCGTTGCTCCGGTCA # Right flank : CTTGGCTTGAATGCAGCAGTGACCCGTACAACAAAAGAGCGAGCCTTCGATTGAAGGCTCGCTTTGTGTTCTCAATTATTCAGTGTGGTGTTTCCGAACTGGACTGACCCAGGTGCCGCTGCCGTAACCCAGGATGGTTTTAACGGCTGGAACCAACGTTGTGACCAGGGCGAGGGCGTTAACCTGCCAATAGATCAGCATATAGAGTGGCATGAAAATCAGATATTTAAACTTGCGGCCACGGTCGTCAACGATCAATGCGGACAATAGCTGCAAGACGCCGGCGAACATTTCGAAGGTCACGAAGATGAAGGCCATGCAGAACATATGATAGACGCGCTCGTAATTGCCGGTAAAGAAGAAGGTGATGAGCGAGATCAGGAAGATCAGCGTTGAGACAAAGAAGAATAGGGACCAGATGATGCTCAGCGTTTGATCAGTAATAAAAGCCCATTGCTTCAAATACTTGCCGGGATGACTGGCAACTCGTTTAAAGTTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //