Array 1 35617-35055 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PPRO01000138.1 Staphylococcus massiliensis CCUG 55927 dd181501-b6ab-4cb8-b883-40a4e737d869_c139, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     35616	    36	 100.0	    30	....................................	AAATGACAACGAATAACAAACTTATCGACA	
     35550	    36	 100.0	    30	....................................	GGCATCCGGTTTCTTAACCTTAATAGATGC	
     35484	    36	 100.0	    30	....................................	TATGAAACAGATGAAAAAGGCGTATCAAGA	
     35418	    36	 100.0	    30	....................................	TATGAAACAGATGAAAAAGGCGTATCAAGA	
     35352	    36	 100.0	    29	....................................	TGTAACTGGTCAAACAACTGGTTATTCTG 	
     35287	    36	 100.0	    29	....................................	AAACACACACTATTAATTTTTTAGATGGC 	
     35222	    36	  97.2	    30	................T...................	TGGGAAGATTGCACGACTCTATTTGAGCAT	
     35156	    36	  97.2	    30	.............A......................	ATTGATGTTGCGTAAGTAACTAACCACGTC	
     35090	    36	  86.1	     0	...............................TCAAG	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  97.8	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC	                              	       

# Left flank :   CAAATGAACAACCTATCAAATAACAAAGGGCTACTGATTTATCTTTACCCTGAAGCGAATTTAAGCATTAAAGAACGATTGATCTTCAGGGAAGTACTGAATGACTTACCAATTAAAATCATTGTGCTAACACAATCTCGCTATTTTCTAGCAGACTCTATTGATGGATTAAATTATTTACGTAATTCTAAGCAAATGATTACAGTCGATTTTATAGAAAATTGTTATTGGGAAGCACCATTGAATTTTAAGAGGGAAGATATAGTAGTTAGTTTGAAAAATGTTTTTGATCAATATAGTCACTGTTTTGAAATTCATCCAACTATAACGAATTATCACCTGGGTGATATAATGGTATTCAAAGATATAGATATCTATGTAATTGTACGATTTCTTAGATTCTGTAAATTAGATTACATTTTAGATATTGATGATACTAAAATTAGTGAACCACTGGCATTATATTTAGGTTTAAGTACAAGTTAATTGATTTACTAGAG
# Right flank :  ATACTGACTTCAAAAATTTCTTCAATGAAACTCAGTATTCAAATTTTAAATCACTTCATAGCGAGATTGAGGATCTATCCTTAATTCTCGCTTTTTTATTCCCCTAAAACACTTAGGAACCATTTTCAACGAGTTGGGCAAAATGTACCAAAAACCCCACTAAATTTAATAAAATACTTTTTGTTAAAAGTAATCAGGAAACTTAAGCATCCACAAACACAAAAATTTACACGGGGGTTCTAAATGAAAACTTTTGCTTTTAAACGAATTGTATCTTTAACGCTTGCGACAGGGCTATCTTTCACGACGTTCGCATACTCAGCTCATGCGGACGAAACGGTTCCGGAAGCACCTATTAAAGAAGGCTCAAATTACTCAAATCAATTTAATCCAAGTGCAGTACCTGAAGACGCGCAGTTAAGCGACCTTTCATCTAAAGAGAAAGCCAAAGCTCAGGCAGATGATTCTTCTCATAAAAACAAATATCCAGTAGTCTTTCT

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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