Array 1 1174794-1173568 **** Predicted by CRISPRDetect 2.4 *** >NC_012891.1 Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1174793 36 100.0 30 .................................... AGACGAGTCAAGAACAAGGGCTAGACAGAA 1174727 36 100.0 30 .................................... CGGCACGCTCATTGGCCAATTCCAAGTCTG 1174661 36 100.0 30 .................................... TAACTGGGGCGGTAGTTTTACTTGTACCAT 1174595 36 100.0 30 .................................... ATCTCATTTTTGAAAGTAAAAACCGTCTTT 1174529 36 100.0 30 .................................... TACTGTTGGACAGCACATCTTTTTGAGCAT 1174463 36 100.0 30 .................................... AGCGTGCTAGATATGTTTACTATGATGCTT 1174397 36 100.0 30 .................................... GGCGTGCAACCACCGTGAAAACACTGTTGC 1174331 36 100.0 30 .................................... ATTTTTTAAATAAAGGATTAATAGAATATG 1174265 36 100.0 30 .................................... CATGATGTTTGCGAATCATGAGATTGTATT 1174199 36 100.0 30 .................................... GAGAACTACTTGATGGAGAACTGGAATACT 1174133 36 100.0 30 .................................... GAATCGAGTAAAATATGAGAAAGCTTTTGC 1174067 36 100.0 32 .................................... CCTCGTAAGCCCCGCTCCATCTGCTAAAGCGT 1173999 36 100.0 30 .................................... CTATATTTGGGTGACATATATCAGCGTGAC 1173933 36 100.0 30 .................................... TTTACAAATACAATTGGAACAATCAGTGTT 1173867 36 100.0 30 .................................... TTAGTCTGTGTCAGCGTGATAGCCACTTTT 1173801 36 100.0 30 .................................... TGGTAGTGTAAATGCTTTGTTTCCTAAGGC 1173735 36 100.0 30 .................................... TCCGTTGGGTGGTGCGCAGAGCCTTGATGA 1173669 36 100.0 30 .................................... ATCGACAAGATACCAAAGCTATTTAACTGT 1173603 36 94.4 0 .................................TT. | ========== ====== ====== ====== ==================================== ================================ ================== 19 36 99.7 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AGAAACCCGAAGTGAAATCGATGATTGACAAATTGGTTGCTACGATTACAGAACTGATTGTCTTTGAATGCTTAGAAAATGAATTAGATTTAGAGTATGATGAAATCACAATCCTGGAATTGATTAAGTCCTTAGGAGTAAAAGTAGAAACGCAAAGTGATACTATTTTTGAAAAATGTCTAGAGATACTTCAAATTTTCAAATATCTCACTAAGAAAAAGTTGCTTATTTTTGTCAATAGCGGAGCTTTTCTAACAAAGGATGAAGTGGCTAGTTTACAAGAGTATATATCATTGACAAATTTAACAGTTCTCTTTTTAGAAGCACGTGAACTATATGATTTTCCGCAGTATATTTTAGATGAAGACTATTTTTTAATAACTAAAAATATGGTATAATATTCTTAGTAAATACAGTAATACAGGGGCTTTTCAAGACTGAAGTCTAGCTGAGACAAATGGCGCGATTACGAAATTTTTTAGACAAAAATAGTCTACGAG # Right flank : AATATCGTCAATATGACTTGAGAGAGGGATAAATACAATATCCTTATGCCTTCCCATTCTTTCTATTAAAACGTTTTCATGTTATAATAGTCAAAAGGAGAAGGAGGGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCGGATGGGGTTGAGCGAGGGTTAGTTGGAGAGGTTTTGCGGCGGATTGAGCGTCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGTCCGGAACTCTTGGCTAAGCACTACGAAGCCTTGGTAACTAAACCATTTTATCCTGAGCTTGAAGCTTACATGACAAGTGGTCCTGTTTTAATTGGGGTGCTGTCGGGAAATCGGGTGATTTCCTCTTGGCGAACCATGATGGGGGTAACTAATCCTAAGGATGCTCTTCCCGGGACCATTCGTGGTGATTTTGCCCAAGCTCCTGGTGATGATGGAGGTATTTTTAACGTGGTGCATGGGTCTGATTCAAGAGACTCTGCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //