Array 1 302-2159 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQUL010000035.1 Corynebacterium diphtheriae bv. mitis strain 09-18 NODE_35_length_5573_cov_32.808116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 302 28 100.0 33 ............................ CTTTCCTTTCTACTTGACGGATCTGTGTAAGAG 363 28 100.0 33 ............................ CAGCGCGGTGCAGACGGACTAGCGTGGGTACGC 424 28 100.0 33 ............................ CAACATACCTTTACGACCATGGGAAAGTAGTGC 485 28 100.0 33 ............................ GCCGCGTCAGCCCATACGAGCTGCTCAGCGAAG 546 28 100.0 33 ............................ CTGTTAAAAACTTCGGCGATGTCGTGCCCTTGC 607 28 100.0 33 ............................ TAGGCTGTTATCGAAATTGTCAACAATGGATCG 668 28 100.0 33 ............................ TGCCATGATCGTCTTTTTTGATACCCCGACAGC 729 28 100.0 33 ............................ TTAAGGCTGGTGCGGATGAGGTTCTTTCCCAGA 790 28 100.0 33 ............................ AGTATCGGGTGCTGGGATGGCACCCCAGAAGAG 851 28 100.0 33 ............................ TAGTCGATGCGGCAAAAGAAAAAACATCTTCCG 912 28 100.0 33 ............................ GGCCATGAAGCGCTACATTGACCTATCGAGACC 973 28 100.0 33 ............................ CGAGAAATGACTAATCGGATAACACCAGTCAAG 1034 28 100.0 33 ............................ TATATCTGGCACGGCCGAATCCTACAGGCATAC 1095 28 100.0 33 ............................ GCAACATTATGAAGGGGCTTAAAGATGGTCTTG 1156 28 100.0 33 ............................ CAGCGAGCTTTTTCTCAGCAATGCCCTTGAGAC 1217 28 100.0 33 ............................ GCCGCATTGAGAGCTAGGATGCCGCTAGGTGCG 1278 28 100.0 33 ............................ TGCTTCTTCGAGGTTGTGGACGTGGTAGGCAAA 1339 28 100.0 33 ............................ TTCGGTTTCTTCCTCAGCTTCTTCCGCCATTGA 1400 28 100.0 33 ............................ TACCGGTGTGTACTCATCTTCGGCAGCGGTCAC 1461 28 100.0 33 ............................ TAGATCATATGTATCACCATCATCAAGCAAGGC 1522 28 100.0 33 ............................ GTTTGGTAAAGTTCTATGAAAGCCTTGGTTTTG 1583 28 100.0 33 ............................ GCATCCCTCCTATTTTTGGTGATAGTGGGATGG 1644 28 100.0 33 ............................ GACGCGCTCACCAGCGTATCGGCAGAAACCTCG 1705 28 100.0 33 ............................ TCATTCTGAATGTCATTTTTAATGGAATCCAGG 1766 28 100.0 33 ............................ AATTCCTCCATCTCGGAAGACGTCAACAACTCC 1827 28 100.0 33 ............................ ACCATTGTGTGAGGGTAGGGGGTCTTTTCTGCG 1888 28 100.0 33 ............................ ATCTTGGTGTGCCTACCCGTGATGTATCCGTAG 1949 28 100.0 33 ............................ GTCGTGGATTTTTACTTTTGCTTCCCAAATCGC 2010 28 100.0 33 ............................ AGAGCGGTGAAGCTCATTGGGGGTGAAGCTGGC 2071 28 100.0 33 ............................ ACATTGCGCGTGCTTGCCGTATCGACGGCGAGG 2132 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 31 28 100.0 33 GGCTCATCCCCGCTAGTGCGGGGAAAAC # Left flank : TGGGACTTATTTCATCGCTGGTGGTCGGACATACTTCACGCTGGCATCCACATTACTTTGAGACCTCGCACATTGTGTGCGGGTCAGGTTCCTATTAGCAGTCTGGAGTATGTCACTGCCTTCGGCGGCATCACCCCCCGGATCATTTTCTTAACAGGGACGAAAATAAGCCATATCGAAGCCAGCGACTAGTTCCACTGCCACAAGGCAGAAGGAACGCAGATAAACATAGCCTGCCCCAGCATGGGGCTAGGAGTACGAATCCTGGGCTCCTTTAAGCGGAACTGCCAACAACGTAATGG # Right flank : CACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTGTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTACGCGTCTTCCTTTGGGCAGACCTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAAGCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGGCTCGCTACGTGTCATTCGGGCCGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGCTTCTTTCCAAGTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCCGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 427-155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQUL010000014.1 Corynebacterium diphtheriae bv. mitis strain 09-18 NODE_14_length_60136_cov_38.148678, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 426 29 100.0 32 ............................. AGACGGTCTAGCGTGGATACGCTTCCGCAAGA 365 29 100.0 32 ............................. TCCATAGTATTTCAAACCTTCCTAGACCGTTT 304 29 100.0 32 ............................. ATATTCGTTATTATCAAAGTAACACTGCACTG 243 28 93.1 32 A......................-..... CCGGACGCTGGTGGGACGGCGACAAGGGCGGG 183 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.6 32 GGGCTCATCCCCGCTAGTGCGGGGAAAAC # Left flank : CTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCGCGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCACCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTCTCCACAGAATACACTGTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATCCCAAAACCCGTTCTTCAACAAAGATTCATCCACCCTGCTAGTGCAAGGAATCACGGCGGTCCAGTTCTCAAAGTCCCT # Right flank : CGCTAGAAGTGGGCTAGGCTACAGAATTAGGGGGGTGTTCCTATATAGGTTGTCAACCTCGCGGGTGGAGAAATCGGGGGCGGATTCTCTCTGTGGGGTTGTGTGGACGGGTTTGTTTTCGGGCATGACAGCTAGCCGACTGGGATTTTACCCGG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCTCATCCCCGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //