Array 1 123588-122461 **** Predicted by CRISPRDetect 2.4 *** >NZ_BARD01000016.1 Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 123587 47 100.0 30 ............................................... GTACAAATTGTTTGTACCATGTTTTAGAAT 123510 47 100.0 30 ............................................... TAAATCCTGTAATGTTAATTCAGAATCAGC 123433 47 100.0 30 ............................................... TACCGAGCTTCCGGAAATGCAGGAGGATAT 123356 47 100.0 31 ............................................... TAGTGGGTGACAGTATCATCATCAAAACATT 123278 47 100.0 30 ............................................... TAGAATGAAAAGACCTCGTAATACATTAAA 123201 47 100.0 30 ............................................... TATGTAATAGACGATCCTTTGGCCTGTAGT 123124 47 100.0 30 ............................................... TATTCATACGCTCATAAACTCGCAAGACAT 123047 47 100.0 30 ............................................... TGCGCTGCAGCACACGGAAAAGCCCGTGCA 122970 47 100.0 30 ............................................... AAAAAGTATGTCTTGAAGAAATTAAAAAAG 122893 47 100.0 30 ............................................... CAGCCGTCGGCATGGCCGCCCAGGCCCAGG 122816 47 100.0 30 ............................................... TAATCTTCTAGAATAGTAGTTGGAGATTTA 122739 47 100.0 30 ............................................... GAAGACGAAGAGGGCGCAAATTTCGATCCG 122662 47 100.0 30 ............................................... CAATTAAAGAGAGTTAAAAAATCAGAAGCT 122585 47 89.4 30 ..................T....T..A.....A.....G........ ATTCTGAGGGCTACTTTGACGTGACCAAAA 122508 47 74.5 0 ..................T....T..A......G..G.TAGA.T.CT | T [122468] ========== ====== ====== ====== =============================================== =============================== ================== 15 47 97.6 30 GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Left flank : GCTCTTGTTACCTTTTCCATTTTACGAT # Right flank : AAGGAAATTTTACAAATCATGGATTAAATGTTATATTGAGGTCTTCATAGATATTTAGAAACCTCCTATATTTGCAACAAACCTTTCCATGCCCTTAGAATACCGAAAATTAAAACCTTATGAAAGCAGAATTTACAGAGAGATTCGCTTGGAGAGTCTGAAGAAATTTCCTGAAGCTTTTGAGGCAGATTATCAGGATGCGTTGAGAACTGAGAAACTTCGATTCGAGATTGATATTGAAAATCAGGAAACCGACAGATTTATAATTGGTGCATTTTATGGGAATGAGCTTATCGGTATCTGTGGTTTTGTAAAAGATGAAAGTGGCATAGGAAATGTATTTCAGATGTATGTTAAAGAAGAATATCAGGGGAGAAACATTGGTATGGCGCTTCTTCGTACGGTTATAAAGGAAGCCGATACAAAAGAAATTATACTGGAAGTAAAGCCAGATAACTTAAGTGCTTTTCATTTGTATCAGAAAGTAGGGTTTAAAGAAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.60,-4.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //