Array 1 17029-20120 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKEC010000019.1 Acinetobacter baumannii strain AB227-VUB NODE_19_length_42239_cov_26.912994, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 17029 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 17089 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 17149 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 17209 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 17269 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 17329 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 17389 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 17449 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 17509 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 17569 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 17629 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 17689 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 17749 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 17809 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 17869 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 17929 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 17989 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 18049 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 18109 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 18169 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 18229 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 18289 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 18349 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 18409 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 18469 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 18529 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 18589 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 18649 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 18709 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 18769 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 18829 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 18889 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 18949 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 19009 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 19069 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 19130 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 19190 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 19250 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 19310 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 19370 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 19430 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 19490 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 19550 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 19611 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 19671 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 19731 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 19791 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 19851 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 19911 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 19971 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 20031 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 20091 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 52 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //