Array 1 2709993-2705785 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHHZ01000001.1 Tissierella praeacuta strain NCTC11158, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 2709992 29 100.0 37 ............................. GATTTAAAAAGAATAGTAATATCCATAGATCCTAATC 2709926 29 100.0 37 ............................. TCTTTATAATAAACCTCTTTGACTTTAATAGCTTGTC 2709860 29 100.0 37 ............................. GAGGGAGTATATGTATTAAGGCGTGCAAGCAAAGAAC 2709794 29 100.0 38 ............................. TTAGAATTAGAATTTGCAGATGGAACGATTAAAGAAGC 2709727 29 100.0 38 ............................. ACATTGTCAGTTAGTGAATCAGATATAAATCTGTATCC 2709660 29 100.0 37 ............................. AAGATTAATTTTAAAGTAGAAGGGATGGATAAACTTC 2709594 29 100.0 38 ............................. CCCAAAAATCTAAAGGGGCTATTACTGTAGAAGGCAAC 2709527 29 100.0 38 ............................. AGAACAGAAGTAATAATTGAAAGCATTTAGAGCAAATC 2709460 29 100.0 37 ............................. TTTAAAACTTATGTTCTTTATTGATTTATATAAAAGC 2709394 29 100.0 36 ............................. ACCTTCTTCTTTTGCTAAATCTGGATTAGATAACAT 2709329 29 100.0 37 ............................. TCAGCTTGCGTAGATAGGGATGGAGTTATTCATATTT 2709263 29 100.0 36 ............................. TATCTAGGTTTCAATTTTTCTATGTGAAATGTAGCC 2709198 29 100.0 37 ............................. TCTTGATGGAATTGCCAATACTTGAATTCTTAGCTGC 2709132 29 100.0 37 ............................. TGTCCCGCACCTGCTGGATGTGCTAAAAGTATTTTAA 2709066 29 100.0 37 ............................. ACTTTTTCAATACTGTCTATTACATAAACTTCAAATC 2709000 29 100.0 36 ............................. AAAGAATAGGTGTTATTTTTATGCTTGAAAGGTGGT 2708935 29 100.0 35 ............................. AAAGTTGAAGTATACGTGGATAGCAAGCAAATACC 2708871 29 100.0 35 ............................. AAGCTTATATATTTAATACAAGTATCAGGGTTACA 2708807 29 100.0 36 ............................. CATTCCTTCGAGTACAGATTCTAATATAATAGATTC 2708742 29 100.0 37 ............................. TATTGTAACTATAGAAGGGGTTATAGAGTGTATAATA 2708676 29 100.0 36 ............................. TAATAATAATAATCATGGTATATATCTAAAATTGTC 2708611 29 100.0 37 ............................. ATAATTCCTCTTTTCTCTAAAGGATCCTCTTGCTTTT 2708545 29 100.0 36 ............................. TCATAGGTACTTATAACAAAACCATTATGGGTATAT 2708480 29 100.0 36 ............................. GTAATTAAATTACTTTTAGTGTAATCCCATGATTTC 2708415 29 100.0 36 ............................. GAAGTACTTGTTCAAATTAGGTCTGAATTTCTTTGG 2708350 29 100.0 35 ............................. GAATCAGAAAAAACATCTTTTTTATAATTAATCAA 2708286 29 100.0 36 ............................. TTTATCCATCTTGATAATGTTTCTTCCGTTATATTT 2708221 29 100.0 35 ............................. AAGGATTAACTCAAGAGGAATATATGAGAATATGC 2708157 29 100.0 35 ............................. TTTTTATTTTTTGTTTATCAGTTTCTAGCATTGGG 2708093 29 100.0 36 ............................. TTGAGATTTACACATGTTGCGGGAGCAAAAGTTAGA 2708028 29 100.0 35 ............................. TTATATACTTCTTCTACTGCCGATTCATCAAATGG 2707964 29 100.0 37 ............................. AAATAACAAGTGATCCTAATAGTTTGTACGAAGTTAC 2707898 29 100.0 35 ............................. AGGATTTATAACTAAACAAGAAGTTGCGGCAATCA 2707834 29 100.0 36 ............................. ACCCCCCACCTGGTTTGTTAAAGTTGCGAAGCTTTT 2707769 29 100.0 36 ............................. TACTGGCCCCAGGTCTAACATAGCTTTACAAACTGG 2707704 29 100.0 36 ............................. GGGGTAGATGATGTAGAGTTAGAACTAGAGAAAATT 2707639 29 100.0 37 ............................. TCTTCTTTTTCTAGACTTTCTATTTCATTTTGCATAT 2707573 29 100.0 36 ............................. GGACAAGTTTTAGTTACACCAGGACCTTCTCTATGA 2707508 29 100.0 36 ............................. CCTGATGATTCTGACTCTATATTTTATTATTTTGAG 2707443 29 100.0 36 ............................. ATTATTGAAATATATTTTAATATATTGAAATATATT 2707378 29 100.0 35 ............................. ATGGGTAAAAGCACAATACAAAGGAAACATCAAGA 2707314 29 100.0 36 ............................. GAAGCAAGGGAGCAGATGTTGAAAATAATGAAAACA 2707249 29 100.0 36 ............................. AGATACAAAATGTTACAAAATTATTATGAAGGATAC 2707184 29 100.0 36 ............................. GATATAACAAGAGGGACATCTGTTCTTTTAAATGTA 2707119 29 100.0 37 ............................. ATTTTATACCTCCTTTTCTATGTGTCTATCTATAACC 2707053 29 100.0 36 ............................. TTGTTTCATTTTCTTCTACAAAGGCATCTGTAACAT 2706988 29 100.0 36 ............................. CCTTATATAACGCTTGATGAATATAAAGAGTTAAAG 2706923 29 100.0 36 ............................. TTAGCTACAGGAGCTATAAAAACTTGTAGAACTAAT 2706858 29 100.0 36 ............................. AGTGATGAAGGAAGAGGATATACAGAAGAATACTTC 2706793 29 100.0 36 ............................. GTAATAGAAAGCTTAAAGCAATTAGGGAGATATACA 2706728 29 100.0 35 ............................. AGAGGACGTAAAGTTTGTCTACACAAAAGCAATAG 2706664 29 100.0 36 ............................. CCCCCAATCTAGTCTTTGACCGCATCTAGGACAATA 2706599 29 100.0 36 ............................. ACAAAAAAGTCGAACAGCTCAAGGAAATGAATATGA 2706534 29 100.0 36 ............................. ACATATTCAACTTTTGCACCTTCTTCTAATTTCTTC 2706469 29 96.6 36 ............................G CAAAAAGTTGAATTAGATTTTTCACCACTTCAAGGT 2706404 29 100.0 36 ............................. TATATTCGTACCTTTGTTATATTCGCTAAACTCTAC 2706339 29 100.0 36 ............................. TGATTTAATAGACGTACAATAGGAGGAAATGGAAAT 2706274 29 100.0 36 ............................. GTTGCAGCTGCATATACTCCAAACATTTCTTCTTGA 2706209 29 100.0 36 ............................. ATTTTAAAAGGTGAAGAAATTTTGTTTGAATTTGTA 2706144 29 100.0 39 ............................. TTATCTTGTCTTAGGACTTTAGGTTTCTTATTTTTTATG 2706076 29 100.0 36 ............................. ACTCACACATGGAAGATTAAAGGCAATAGAATTATA 2706011 29 100.0 36 ............................. TTTCTTTTTCGTTTACAGGTTTATTCACTGTAAAGT 2705946 29 96.6 37 ...........................G. ACTCATAGACTTGACGAAAGAGATTTAGTATATCCAT 2705880 29 100.0 38 ............................. AAATATACATTTTGGTAAGGTTGTTTTAACACTAATCC 2705813 29 79.3 0 ..............T...G..T..GC..C | ========== ====== ====== ====== ============================= ======================================= ================== 65 29 99.6 36 CTTTAATAGAACTAGAGTAGAATGTAAAT # Left flank : GAATATTCTGGATTTAAAATATGGTGGTGATATAATATGTATGTGATACTTGTTTATGATATTTTGGCAGATGATAATGGTTCCAGAGTATCTAGAAATACTTTTAAAATTTGTAAGAAGTATTTAACTCATATTCAAAAATCAGTATTTGAGGGAAATTTGACTGAGTTGAATTATATGAAGTTGAAAACTGAATTAAATAAACATATTAGAAAGGATAAGGATTCTGTATTGGTATTTAAGAGTAGAGATGAAAGATGGTTAGAAAAAGATTATCTAGGAATAGTGGATGAGAAAACATCTAATTTTTTTTAAATTATATCTTGTCGACCTATAATAGTGCAAATATTGTAGGACATTGACAAACAGTTATATTTAATAAATGAAAGTGATTATTTGAAGATTTCAGTAAATAAACACACTAATATAACAAGTAAAATTAGAGATCGACAAAGATGATATATTAACATCAGCAAAATCAATGAGTTGAAAGAAACGCC # Right flank : CCCTTTTTGGACAAAATCCTACTTAACATAGATTTTATTAAATACCTATGATGCCTTTCCTAATGTCATAATACTTAGTTCCCTATATTCAATTGGCGTCTTATACCCTAAAGATCCATGAATCCTTAGGTTGTTATACCAATAGATATACTCCGCTAGCTCTAATTGTAGTTGTTCTAAGGTCTCGAATTTTCTTTGATATATGAATTCTGTATTTAATATTTTATTGGTAGCTTCACTAACTGCATTATTATAGGGGGTTCCCTTATTACTTAAAGATCTTTCTATATTAAAAGTACTTAAAATGTTATCTATTAGTGCATTATCATATTCATTACCACGATCTGAATGGAAAATCTTGATATCTTTTAGGGAGTATTTACATCTTAAAAGAGCTGTCTCTATAAGTTTGGCGTCTTTCTTAGCCCCAGCCGCATAACCAATAATCTCCCTATTATATAAATCTATTAAAGTACATACATAGTTCCATTTATCAGATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAATAGAACTAGAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //