Array 1 2518071-2520906 **** Predicted by CRISPRDetect 2.4 *** >NC_011662.2 Thauera sp. MZ1T, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2518071 29 100.0 32 ............................. CCAGGCGCAGAACGCCCGGTCGGCCTCGGCGA 2518132 29 100.0 32 ............................. TCGAACACGTAAGCCATGCCGCCGCACTGCTG 2518193 29 100.0 32 ............................. TCGCCCTGCTCCATGCTCTCGAATGCGAGCGA 2518254 29 100.0 32 ............................. TCGTTGATCGTGATCGGCTCGTCGGCGTCTTG 2518315 29 100.0 32 ............................. CTCGAAGAAGCGCCGCCAGGCGACAAGCCCGT 2518376 29 100.0 32 ............................. GCGACCTTCTCAGCGTCATACAGGCCGTCCGT 2518437 29 100.0 32 ............................. CATCGACATCATGTGGGAGGCCCCTACGGTCG 2518498 29 100.0 32 ............................. AGGGCGCGCCGTGCTCGATGATCCGGCGTCGG 2518559 29 100.0 32 ............................. CTGCTCGAGGCCTGACATGGACAAGATCACAG 2518620 29 100.0 32 ............................. TCGCGCAGGCCGCGGGCGATCCACGTCGGGCC 2518681 29 100.0 32 ............................. GTGCCGGCGGTGTCGTGCTGGTGCCAGGCGCC 2518742 29 100.0 32 ............................. TCGGCGACGAAGTTCCGGTAGGTCGCGCCCGG 2518803 29 96.6 32 ............................G CTGTCGCGGCGCTTGTCGGCCTCGTCTTCCAC 2518864 29 100.0 32 ............................. GCGGGAAGGGCGCGATAGATCTGCGCAGCGCG 2518925 29 100.0 32 ............................. CTCCGCCCGCTATGACGGGCAACCGTAACACC 2518986 29 100.0 32 ............................. TTGAGTTGCTCGATCGTGGCGGCCTGAACGAC 2519047 29 100.0 32 ............................. CGCGACTACTACATGCCGCTGTGCATCCTCAA 2519108 29 100.0 32 ............................. TTGCCGATGATGGCGACCGTCTGCTCGAGCGA 2519169 29 100.0 32 ............................. GTGTTCCGTGCCGATTCGGTTGCCCCATTACC 2519230 29 100.0 32 ............................. GTCCACGAAAAAATACCTATGGATTGCAATCA 2519291 29 100.0 32 ............................. TGTACCTGAATCGAGTTTCGTCGCCGGAGTGG 2519352 29 100.0 32 ............................. GAGCCCGGGCGGGGGGATTGCACTGTTTGCCG 2519413 29 100.0 32 ............................. GTCCAGGCATAGGTCGGGCTAGTGACGCCACT 2519474 29 100.0 32 ............................. TGGATCGGGTCTTCGGGCATTCCGACCTCAAC 2519535 29 100.0 32 ............................. TGTACTGGGTGATCAGATGCACGCCCCAGACG 2519596 29 100.0 32 ............................. GGACAGACCGCTACCGTCCTCGCGTCGTACAA 2519657 29 100.0 32 ............................. GGACAGACCGCTACCGTCCTCGCGTCGTACAA 2519718 29 100.0 32 ............................. GGACAGACCGCTACCGTCCTCGCGTCGTACAA 2519779 29 100.0 32 ............................. TCAGCCAGGAACAGCGCGACAGTCTGCGCCGC 2519840 29 100.0 32 ............................. GTGCGCTCCCACGGATAGAGTTGCGCCGCCCG 2519901 29 100.0 32 ............................. CTGAGCCGCCAGGCTGTCATCAATGACGACCT 2519962 29 100.0 32 ............................. GAATCTCGCCTGCCTTTCATTGAGCGCCATTC 2520023 29 100.0 32 ............................. GGCGGCGTTGTAGATCGGCTGTCCCACATCCA 2520084 29 100.0 32 ............................. TCGGAGGTGGCGCCCCCGTTTTGGCCTTCGGC 2520145 29 100.0 32 ............................. CATTCCGGCGTCGGATAGAACTGGTGCGACTT 2520206 29 100.0 32 ............................. TGCTGTGTTGCGTAATTCGCCGACAGCACGCC 2520267 29 100.0 32 ............................. GCCGACGAACGTCCAAGTGTGGTCCTCACCCT 2520328 29 100.0 32 ............................. GAATACCAGATCCCGCGCGGTCGGGTCTATTT 2520389 29 93.1 31 .........A..................G CCGATCGACGCCGTCACCGGCGCCACCATCG 2520449 29 100.0 32 ............................. CACCTCACGGCCGCCCCGCGATCACGTGGTCA 2520510 29 100.0 32 ............................. CTCCACTCGTGTGTACGGGATGCCCGTTCCAC 2520571 29 100.0 32 ............................. GGCTCGGTGTGCGCGGCAAGGAGGCTCGGTCT 2520632 29 100.0 33 ............................. GGAGTCGCTCACGGTGTTCTCGGTGTAGGCGGG 2520694 29 100.0 33 ............................. GGAGTCGCTCACGGTGTTCTCGGTGTAGGCGGG 2520756 29 100.0 32 ............................. GAGCGGCCCGAGTATCCGCCGGTGCTGACCGG 2520817 29 100.0 32 ............................. CAGTACTTTGGCCTCACCACGCCCGAGCTGCA 2520878 29 96.6 0 ........A.................... | ========== ====== ====== ====== ============================= ================================= ================== 47 29 99.7 32 GGTTCCCCCGCGTCCGCGGGGATAGGCCC # Left flank : CACTCGACGGTGCGCCAGACACTATCGACCGATTGGTGCGACGCGAGGCGGCAGCGGTTTTCAGGAAGCAGTCCGTGATTCCAACAATGATCGACAAGATCAAGGCTGTGTTGCGCATGGAGGAAGTAGATGCCGCTGGTGGTGATAGTGACGCGTGATGTCGCCGATCGTTTTCGAGGCTTTCTCAAATCGGTGATGCTTGAGGTTGCCCCTGCAGTCTACGTATCACCACGTATGAGTAAGGGCGTGCGGGATCGGACTTGGAACGTACTCGCCGAGTGGCACGACTTCGAGCCGCGCGGCAGCATCGTCATGGTCTGGCGCGACAACAATGAAACTGGCGGCGTCGGCCTCGCTCATCTCGGAGAGCCGCCGCGAGAACTGGTCGAGATGGATGGGATGTGGGTCGCCCGGCTGAGGCGACAAGCTCAATCTCTTTAACAAATTGGGAATATGGTTTCTTGAGTTTTCCTTTTTGAGTCATGGGCTTGACTTCAAGA # Right flank : CTTCCCTTCTAGATGTGATCTTGAGAGGGCGAGCGTATGACCTCACAGGCATGCTGCCTACGATCACGAATATCCGCTCACCGGTTCACCCACCCCCCGCACACCGGAAACACCTGCCCCACGAAGCAGTTCGCCGCCTCGCTGCACAGATAAACCGCAAAGCTGGCGTCCTCGTCCGCCGTGACCAGGCGCCCCAGCGGCACCTGCCACTTCAGGCGGTCCTTGAACGCCGGCGTGGCCTGGACCTCGGGCGGGAAGTAGGTGGGGTTCTCGACGAAATTCTGCGCAATGGCGTTGACCTGGACGCCGTGCGCCGCGGCCTCGACGCCCACCGCCTGGATGTAGGCCAGTTGCGCACCGCGCGCGGCGGCGTAGCTCGAGCGCAGGGCCATCCCGCGCAGGGCGGCGGCGCTGCCCATCAGGAGGATCTTGCCCGCCTTGCGTTCGATCATCTGCGGCAGGACGGCGGCGACCATCTCCCGCATGGGATGGACCAGGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGTCCGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //