Array 1 2386423-2386000 **** Predicted by CRISPRDetect 2.4 *** >NC_012658.1 Clostridium botulinum Ba4 str. 657, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2386422 30 100.0 36 .............................. GTTAATGTATTTTGCATTATATTTGCATTATTAATA 2386356 30 100.0 35 .............................. CCTTCTTTCTAAGCACATTTTATAAGTGCTTTATT 2386291 30 100.0 34 .............................. GTGTTAGGATCATATGCACCTATAATTTCTTCTT 2386227 30 100.0 36 .............................. AAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGT 2386161 30 100.0 36 .............................. TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC 2386095 30 100.0 36 .............................. GATGAAGAAATAAAACAAAACATTTCCAGTAAGATA 2386029 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATCATCGGGAAAGCTTTCTGGAAAATCTTGATATTCCAATGGGGATGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGACTAATTTTCCTAACGTAGATATAATACCATTCACCAAGTTGAACCTTAACATAGGATGTATTTAAGATAAAAAAATGAAAAATATGAAGCATATTTAGTATTGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : ACTATTCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAATTTCCTTTTAGGTGCAATTATTTTTGGGTTATTGACTTGTAGTCTAAAGCTACACCATAAAAAGGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATGCGGTGAATTGTATTACAAATAACTAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATCATAACCTAAGTAATTTATAAGAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATCTATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTGTACGGAAAATATTAAATTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 2386837-2386676 **** Predicted by CRISPRDetect 2.4 *** >NC_012658.1 Clostridium botulinum Ba4 str. 657, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2386836 29 100.0 38 ............................. ACTAATTTTCCTAACGTAGATATAATACCATTCACCAA 2386769 29 100.0 36 ............................. ATAAAAAAATGAAAAATATGAAGCATATTTAGTATT 2386704 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 100.0 38 GTTGAACCTTAACATAGGATGTATTTAAG # Left flank : GAATAAAATAACCTCTAACATTCTCATTATAAACTACCTCTTATTTTATCTGATGACTACCTGCCCTACCCTAGTACTGCTATTTTTTATAAGTTGCAGATAAGAGCAGCTACGTCCCCATGTTAGTTCTTCTAAGCTTCAACTGGAGTAGGGATTTCTTCTAAGCGAACTCCGTTTGAAACTAAGAAGTGTTTGGTCAAATTCATCCGTAATGAAAAACATCAATGGATGATAATTAAATAATAAGCATTGAAGTATACTGCAATGTCAAGTCTATTTGAGAATATTTATGGTGTCAGATACTGTGCGTCCATTATAGTAGTTTTTCCAGGTAAATTAAAAAATAAAAGTAATGTAAACTCAATCATATTAGTGGTCTATATAGGATTTTTTATAGAAATTTCTATTTTATAAAATCATCGGGAAAGCTTTCTGGAAAATCTTGATATTCCAATGGGGATGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTG # Right flank : CAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATGTTAATGTATTTTGCATTATATTTGCATTATTAATAGTTGAACATTAACATGAGATGTATTTAAATCCTTCTTTCTAAGCACATTTTATAAGTGCTTTATTGTTGAACATTAACATGAGATGTATTTAAATGTGTTAGGATCATATGCACCTATAATTTCTTCTTGTTGAACATTAACATGAGATGTATTTAAATAAGTAAAAAGATTAATAAAAAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //