Array 1 14007-10502 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPUL01000015.1 Eggerthella lenta strain A2 A2000015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 14006 33 100.0 34 ................................. ATCGTCCATAGCGTCAGCCTGTGCGCCCATCACG 13939 33 100.0 34 ................................. AAGCCGTTTGTAATCCCTATAAGCCGTGTACGGT 13872 33 100.0 33 ................................. CACGTGGTTACGCTGTAGTCATAGCGCGGAAGC 13806 33 100.0 34 ................................. ACACTATGCACATAATACTTGCGGCGTATATAGT 13739 33 100.0 35 ................................. CCGTGTGTCGGGGTGTGCGGGCTTGCTGAACGGGT 13671 33 100.0 34 ................................. AAGAAGTACGGCACCCCTTGCGACGCGACCGAAG 13604 33 100.0 34 ................................. TGCATCCGCAACACGGGCGCGGGCGTTCTCGTTA 13537 33 100.0 34 ................................. TCAACCTCCACGACCTTCCCCACCATGTCATCGA 13470 33 100.0 34 ................................. ATGCCCGGTGACGCATCTCCCATCATCTCCGGCA 13403 33 100.0 33 ................................. AGGAACGTGAAGCCGCGCGTGAGCTTCGTCATG 13337 33 100.0 33 ................................. GAGACGGTCGCCCGATCGTCCGATGACGGGGAG 13271 33 100.0 33 ................................. ATCACTCGCAGCATCTTGGGAAACCTCCTTTTC 13205 33 100.0 34 ................................. CGTCGCGTGGTGCAGGGCGCGCAAACGCTGTCCA 13138 33 100.0 35 ................................. AGCTCCAATACCATTTTAAATTTTACTTCCAACGG 13070 33 100.0 38 ................................. AACGAACGCTCCGACATTGACGGCATCTCCCGTAGGGA 12999 33 100.0 35 ................................. TCCAGCGCGCTCATGATGGTGGCCCAGTCCATGGC 12931 33 100.0 33 ................................. TTCGCAGCCGCGCCTTTCGTGGCCATGTCTCGC 12865 33 97.0 34 ......T.......................... ACTCCGAGCGACTCGCCCGTGCGGGCGCTGCCGA 12798 33 100.0 34 ................................. TTGGCCGCTCATCGGTACAGACCAATCGCAGGAA 12731 33 100.0 33 ................................. GTTGTCAAGCTCTGCTTCGCCTCCCAGTCAATG 12665 33 100.0 33 ................................. GGCCAGCAGCGCGACGCAGCGCCTCATGGCGAC 12599 33 100.0 33 ................................. CTGTAATGCCTGATCTGTTTGCCGATGTACTCA 12533 33 100.0 33 ................................. GAGAGCGCGGAGCATATGACGCAGTGCGTCTGC 12467 33 100.0 33 ................................. GTCAACGCCGGTGGCACGTGGCCTGCGTCCCTG 12401 33 100.0 32 ................................. ACGCGGCTGCCGTCCTCCATGCGCGCGTCCAT 12336 33 100.0 33 ................................. GAGACCGAAAGCCGCGATTCGTCGAGCATCGTC 12270 33 100.0 35 ................................. GCTTTCGTCTGCTACCTGCTCGTCAGGGATGCGCG 12202 33 100.0 33 ................................. CGCCTGCTTTGCAGGGTCTTGCAGATCGGCGGT 12136 33 100.0 35 ................................. TCCTTGACGTAGAGATAGCGAAACTTGCCGTAACG 12068 33 100.0 33 ................................. AACTTTATCACACTGTCTCGGCTCGATAGCTCC 12002 33 100.0 34 ................................. AAGCGCGGGATGCTCGTTGATCTTGTCTACTACA 11935 33 100.0 34 ................................. CGGCATGGACGGCGATGATCTTGTTGAGGGCGTG 11868 33 100.0 33 ................................. GGATGCGAACCAGAAGAGCTCTACGGTCTCAAG 11802 33 100.0 34 ................................. CATACTGTGAAAGGGGTATAGCCAGGTTCGACGG 11735 33 100.0 34 ................................. CGTCTGGTGATCTCGTCCATTCGATCTGCTCCCT 11668 33 100.0 33 ................................. CGTATCCCAGTACTACCCTGCGGTCGCTGGCGG 11602 33 100.0 33 ................................. TGCCATGCCCTGACCCCTTCAACGGTGGACATC 11536 33 100.0 33 ................................. CGACCTTGCGCGAGACGATGCCCGAACCGTCGG 11470 33 100.0 35 ................................. TCTCCGCTTTCGTCTCGCGGCCATTCCATCCCCGG 11402 33 100.0 34 ................................. CACGCACCCACCATGTGATAGCTGGTCGATCTGT 11335 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 11267 33 100.0 34 ................................. GTCTCTGCTGGAAGCCAATCGGTCTACATCGAAA 11200 33 100.0 35 ................................. GGGCATATCGGCATAGCATGGTACGAGGAAGCCGA 11132 33 100.0 33 ................................. AACAGAATGTCCTCGTCGTGGGCGCTGAAGCCG 11066 33 97.0 33 .....................A........... TGACGAGTATCGCCTATGGCTTGAAAGCGAGGT 11000 33 100.0 33 ................................. AAGCACACCACCAAGCAGACGCGCAGCCTCATA 10934 33 100.0 34 ................................. GTCATCTAGGACGTTGCCGGAAACGACATCCTGC 10867 33 100.0 34 ................................. GTGCCTCACCGGCCGGCACGTACGCTCGCGCACG 10800 33 100.0 34 ................................. CAGAACTTCGCGATGGCGAAGCAGAGCGGCTACG 10733 33 100.0 35 ................................. GTCCCCGTCGGCGGCTTGGTGTCCATGCTGATGAT 10665 33 100.0 33 ................................. TCGTCCTCGCTGAGGAAGTAGGGGTCGAGCGAG 10599 33 100.0 32 ................................. AAACGGTTGAACGATTTGCGGACGCTGGCGAG 10534 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ====================================== ================== 53 33 99.8 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCTGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGGAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAACAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAACCAACGTACGAAGCTGAAGGGTTCTTGGCGTTGTAGGACCATGGTGCGAGCATGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCA # Right flank : TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACACGTCATCGTTCAGCTTGCGGGCGCGCGGGTTGAAGTCGCGAGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCTCAAACGAGGGGGTAACCGATCCTTGCCGTCGCTTCCTATCGAGACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGCCTGCGCCGAGTTGTGAAAGGCGCAGGCGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAGCTCAAACGTCGTGCAGTCCACCAGCCCGCGATTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //