Array 1 7420-7720 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHNZO010000019.1 Paenibacillus sp. SM 69 NODE_19_length_148807_cov_47.976125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 7420 29 96.7 36 .....................-........ CGGGTCGTCTCCTGAATGAATTGCTTGGACTCATCA 7485 30 100.0 39 .............................. CTGATGCACTTAATGTGGATGATATCCACGGGGTGTATC 7554 30 96.7 39 ...C.......................... ATCATATGCCCGTCGCCTTCCTGAATCTCGCCATCTTGC 7623 30 90.0 38 ....A............A.....C...... AAACAAACTGCACTAGTTCCTGACTGGCAGATTATTTA 7691 30 93.3 0 .A..A......................... | ========== ====== ====== ====== ============================== ======================================= ================== 5 30 95.3 38 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : ATCCTCGCCGTACAACAGGTGGTGCGCCATGCTGGCTGATGCTGAAAGGAAAGTGCTGCGGATCATTGCGAATTATTCGGCTGGCCGTCGAAGGATGCCTTCATTACTGGAGTTAGAGAGGAAAACGGGAAAGAGTCAAAAAAAGCTATTGGAGACTTTGGCGGAGCTGGCGAAGGAAGGTTATATTTCTTGGACCCCGGCCGATCCTGAACGGATCACGTTGATCCAAGCGTGGGAACGTGAGGACAGGGAAAACTGGTGGCGGATGTACGGTTCAATGTGAATCCAGAACCATGGCGTCAAGGTGGAGTTGGGGGCGGATTGGGGACAAACTTCACTTGGATTCACAAAAATTCACTCGGATTACGAACAGATACGAACGGGAAAAACCCTCGATTATCGAGGGTTTTAAAGATTTACTCGGATTCAATATAGGTACATTTCAATTTATGAGGAATTGAAACCCGCACCCATTGGTTCGATGTTAACTTCGAAGTTGA # Right flank : CTCCGCCGCTTTATTCAGCCAGTATAGTGAGCATGGCGTGCATGACCAATATTTCGTTGAAGGAATGAACCTGGGCTCAAGTGGAGGTCATTCCGCTCGATTATGCGCCGTGGCGCGGCCGAACAATGCAAGCAAAAAAACCTCTCGAGATCGTCTCGAGAGGCTTTACGGCGATTAGAACGTAATCGAATGTCTGCGGTCTTGGATGCGTTCGCCGGAACGTGTTCGTTCGACATAGTGAAGCTTGTTGTCCGTCATCAATAAAATCGTAGAGCTTCTCGTACCATAATGATCGCTCCGAATGTAAATCGAAGAGAGGAGACGCTCCCACTGCAGCGGCACGCCGGTGGCAGGCAGTGCATCGTCAGGTGCCGGCTCCGCGTCCTCAAGCAGTTCAAACAACGCATCGACCCGGTCCTCCCGAACGTCCTCCAGCTGCGCTCCCAGCTCTTTCTTCCCTTTCGTTACCTTCGGCCAATCGGTGTCCAGCAGATGGTTGC # Questionable array : NO Score: 6.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 30094-30522 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHNZO010000019.1 Paenibacillus sp. SM 69 NODE_19_length_148807_cov_47.976125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 30094 30 93.3 38 ....T............G............ TAGAGTTTGTTCTGACTGTGCAATTGCCGATACGCGAA 30162 30 96.7 35 ....T......................... GAGTCAAACTCTTTGATTTGGGACTTGTATAATTC 30227 30 96.7 37 ....T......................... CGATAAGCTCGTTTGATTCCACAGTACGACCGAACGC 30294 30 100.0 37 .............................. TTCGGTCGGTATGGTGGCCTTCGGCCGCCAAACAGCC 30361 30 80.0 35 .......................AAACTC. TTAGCGGTCAGCTTAGGCAGCGTCGTCTGGATTCG 30426 30 100.0 37 .............................. TGGATTCGGTCCGTGGTCTTGATGTCGGCAAAACAGT 30493 30 83.3 0 ................CGGAA......... | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 92.9 37 GTTTAGAACGTACCTATAAGGAATTGAAAC # Left flank : CGAAGTCGCTGCTGGCCGCGATCCCGGTTCCTGACCCGAAGGTGGAATCGCAGAAGACGTTCACCGCTGTAGAGGAGTCCTCGAAGGCGGACCCATACGGCTTGGAGCGCTCAAGCTTTGTTGAAGTGAAGAAGGGGCATTGGGTGGCGGTTGCTGAGGGGTAGGGTTAGGGATAAATAGGCAGGGGAGTTATAATTTAGGAGTCCGTCTCGTTCTTTGTGATCGGCTGCTGGAAGAATTTGAAGGTAAGGACATTAAAGAGGTAGAATTAGCTTATGCAATATAGAAACTAACCAAAGCAGAGTTGAATTCTGTTGGAAAAAAACGGGTAAAGATTTATAATGTAACTACGCATTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAATGAGGGCAGCGTGGTAACAGAGATTTTGGTAGCTGGTGTAAGGGAGAATTGTTTGTTAGATATGTGGGAATAGCGTAACGACGGCGTTTTTGTGG # Right flank : CATCCTTCGGCGACTGTAGGCGTCATAGTCGAGGTTGTTCCAGCTAGGCATATTTTTGGATTCCCAACATTTAGAGCTTCGAAAAAGAGGATCTGGGTTCGAAGGAAAAAAGTCTTTACGGATCGACATCTGTATCCGGAGCAACATGATTGGTGATAAACCTGCATCAACTTGAAGCGCTGCATATACCGTACACCGTCGTTGGAGAGGCTGCAACAAAGAGCATCCTCTCCCTTGAAGGAGAAGATGCTCCTTGACACTAATGGTTTCATTATTGACCGCAATGGAAGCTGTTTTACGGCCTTTACGTATATCCGTGTCGATTTTTACAATCTAAATAGATTAAGTATGAAATGCCCGGGCCATCGCATCCAGATAGCTCTGAACGGCGCGCTGACTTACTTCCGCTTCTGGAACGAAACTTTCAAAAAGGTGAAAGCATCCGGGATACAGGTGAAATTCGACATCTACACCTGCCTGTGCAAGTCGTGTTACATATT # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:0, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACGTACCTATAAGGAATTGAAAC # Alternate repeat : GTTTTGAACGTACCTATAAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //