Array 1 2053736-2048267 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035281.1 Aminipila luticellarii strain JN-18 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 2053735 33 100.0 36 ................................. AATCCATATATGTTAAAGATTGACAATATGCTAATG 2053666 33 100.0 35 ................................. AAAGTGGGAACAGTTTAAATGAAACATTAGATGAA 2053598 33 100.0 35 ................................. ATGTAATGGAAGTTGTAACAGAGATTGAGATACGT 2053530 33 100.0 34 ................................. TGAAAAGCTTGAAAGAGAAATCGAACTAGAAAAG 2053463 33 100.0 33 ................................. TTGTTCCCCTGCAATTTCTGTAATCCAGTCTAC 2053397 33 100.0 35 ................................. AGCATGAATACGACCATTTACAAGGTGTATTATAT 2053329 33 100.0 34 ................................. ATGTAAAATTACTTATTGGTCACGCTCTAAAGGA 2053262 33 100.0 36 ................................. ATCATAGTAGTAAATATATTGTTAAGTGGTGTATAG 2053193 33 100.0 34 ................................. ATTAGATATGTTGACTTCAGCTATGAAAGCTAAT 2053126 33 100.0 34 ................................. TATTGGAACAGAAAGTGGTTTATTAGTTGATAGT 2053059 33 100.0 35 ................................. TTAAAAATACATTCTTTATCTTTAATTATTGCTTT 2052991 33 100.0 34 ................................. TGTTGGAGTGTATAAAGAGGATAGCCTTGTAGGC 2052924 33 100.0 35 ................................. AATTTTATTTGGGATTAATTGCAATTTTCCACTAC 2052856 33 100.0 34 ................................. CATGAACTTATCGAACTTATCTAAATACATTATA 2052789 33 100.0 35 ................................. AGCTTAGCCATCCAAGCCCTACAAGAGAAAGCCGC 2052721 33 100.0 33 ................................. AGTTTGTGTTAAATCGTTAATTTCTCTTAAAAG 2052655 33 100.0 34 ................................. CTTGCACTAGATTAGAACAGGTGCAGGAGATTGC 2052588 33 100.0 34 ................................. TATGTTATAATGATTAAAAGTGAGGTGAAATTAG 2052521 33 100.0 34 ................................. ATTGTTTACATATTTTTCCTGATGGTTTATAATT 2052454 33 100.0 35 ................................. TTAGAGCTGTATGATATTTTGTGTGCTCATCACTA 2052386 33 100.0 35 ................................. CAATTGAAATAGATTCGGTGGATGAATTTATAAAT 2052318 33 100.0 33 ................................. TGCCACAAATACAATTTATACAAAATATATGGT 2052252 33 100.0 34 ................................. TTAGTCGGGGGTGGATATGACGGAGCTGCAGGAA 2052185 33 100.0 34 ................................. AAGAATTGCTTGCTTATAATGCTACTTTAATAGA 2052118 33 100.0 33 ................................. CCTCCCTTTTATTATTTAGAATGGAGGTTAGGT 2052052 33 100.0 34 ................................. GGTTACAATAAAGGTTATTGGGAAGGTGATTTTA 2051985 33 100.0 33 ................................. TATAGAATTAATTAAAGTAATGATGACTAATAT 2051919 33 100.0 33 ................................. TTGTTTATACAAAAATAATTCAAAACAATACAG 2051853 33 100.0 34 ................................. ATAAGAGAATTAAGAAGAATTGCAAATGAAGATG 2051786 33 100.0 33 ................................. ATTACATAAAAGGAGGTGAGCCGTATGGCTAAA 2051720 33 100.0 34 ................................. AGTATCTATAATCTGCTGTGCGACTAATGGTTCT 2051653 33 100.0 35 ................................. ATAAAGTCGCTGGCCTCTCGAAAGGTTATAGGTCT 2051585 33 100.0 35 ................................. GCCTTTGTACTCATAGGGCAGCCTATACAGCCAAG 2051517 33 100.0 35 ................................. ATTGGAATTGCTCCAAGTGCTTTTAAATTTTCCTC 2051449 33 100.0 35 ................................. TTTGATGAAGTAGCACTACAACCAGAATCCTTTGT 2051381 33 100.0 34 ................................. CACATGTTTAAAAAGCTATCTACGGCTTTATTTT 2051314 33 100.0 33 ................................. ACCTTTGTTATGAAAAGCCAACAAGATGATACA 2051248 33 100.0 33 ................................. TCTTTCAACTTCCTGTTGAATTAAGGTAACAAT 2051182 33 100.0 32 ................................. TCACAGTCATTTTGGACACCTCTTTCTATATA 2051117 33 100.0 35 ................................. CAGTCAGTGAAGCAGATGGCAATAAATTATGCTTT 2051049 33 100.0 34 ................................. ACCAATCCAGATGTGCGTGCAGCTGCGCAACAGA 2050982 33 100.0 33 ................................. GGTCTTATCGCGTCAGTTACGGCGCGTAAACAC 2050916 33 100.0 34 ................................. CTCCCGAAATGCGCCCCTTTAAATGAACGATACC 2050849 33 100.0 35 ................................. ACTTTCCACTAAAAACTTTAGTGCCACAAGTAAAG 2050781 33 100.0 34 ................................. TAAATTAGTGATAGCAGACATAGGGTGCGCGTCA 2050714 33 100.0 34 ................................. GCGAAAACAATAAATGTAATAGCCATTAGTCCGA 2050647 33 100.0 33 ................................. AAGCCAACCATCGGGGGAAGTATTAAAAAATCC 2050581 33 100.0 34 ................................. CGATTGCGGTAACGTCAATCATAAATGAATTTGT 2050514 33 100.0 34 ................................. TTACGAATAGACGGGGAAGAAACCGACGCAACTT 2050447 33 100.0 35 ................................. CTTTGCTCCGGTCGGTCGCTCTCTTCCTCTATAAT 2050379 33 100.0 34 ................................. TCTATGACCTCCCCGTCCAGTTTAGGATCCATAT 2050312 33 100.0 34 ................................. CTCCCGAAATGCGCCCCTTTAAATGAACGATACC 2050245 33 100.0 35 ................................. ATAACCCACATATTTAAAATAAAATTATACATCGT 2050177 33 100.0 33 ................................. GTATGAAACGGGCGTGTTATTCATTAGCCGTAA 2050111 33 100.0 35 ................................. AGTAGTAACGAAGAAAAGAACACAAGTCCGGCGAT 2050043 33 100.0 33 ................................. GGCTTTAAACTAACAGACTTCGGAGCATCGACT 2049977 33 100.0 33 ................................. AATGAGAATGACGAGGTATAAACATGAATGTAA 2049911 33 100.0 34 ................................. GTATTGATAGAATCACGGAGTTAGTTCTCTTAGT 2049844 33 100.0 33 ................................. ATCTGCAATATTACCAATACCACAAGAAGGCTC 2049778 33 100.0 33 ................................. CTGTTCAAATTCAACATTACAAAATATTAAAAG 2049712 33 100.0 33 ................................. CTTTTTACAATGGATTAAGCAAGCCGAAGAATT 2049646 33 100.0 33 ................................. TATTATAACAATAGTTTTTATTTATGGTATTAT 2049580 33 100.0 33 ................................. ATTTACTTTGATTAAAATTATATTTTGTTTACA 2049514 33 100.0 33 ................................. CAACTTGAATTATATTGTCTTCTGTATCTTGTA 2049448 33 100.0 34 ................................. AAATGTCCATTTTAGATTGTGTTTATCTAGTTTC 2049381 33 100.0 34 ................................. GTTATAACATGGAGCAAGTTGGTGAAGTCTTACG 2049314 33 100.0 35 ................................. CTTTTTACAATGGATTAAGCAAGCCGAAGAATTAC 2049246 33 100.0 34 ................................. CTTTTTACAATGGATTAAGCAAGCCGAAGAATTA 2049179 33 100.0 35 ................................. GTCATAACATGGAGCAAGTTGGTGAAGTCTTACGA 2049111 33 100.0 33 ................................. ACTGACAGGTTTATCAATTACACATCCAGAACT 2049045 33 100.0 34 ................................. TCGTATACGCCTTGTTGCGGAATAAACTGCATAG 2048978 33 100.0 34 ................................. GGTTGCGGTACTCCGTTGTCTATGGAGGATTCTA 2048911 33 100.0 34 ................................. ACTATACTTATCCACAGATAATCATAAGTTATCC 2048844 33 100.0 36 ................................. ACTTCAGACTTTGAAGCACTAACCAAGCGAATAAAC 2048775 33 100.0 35 ................................. ACAAACTGGATGCACCAACGACAAATATATTAAAA 2048707 33 100.0 34 ................................. TTTAAATCACATAAATTTACAAATGACTTTTGTA 2048640 33 100.0 36 ................................. ATATTTTTATCGGCATAACATGGAACCAAGAGGTGA 2048571 33 100.0 34 ................................. GTACCATCTCCCATATTAGCAACACCAATTGCAA 2048504 33 100.0 35 ................................. CATCTTTAGCACCTCTTTTCACATTTTGAGTGTGT 2048436 33 100.0 37 ................................. GAAAAAAGCAAACTGCTATATTTAGCTGGGGATGATC 2048366 33 100.0 34 ................................. AGAGCTGATGGGAATCTATGAGGATGATAAAGAC 2048299 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 82 33 100.0 34 GTCGCTCCTCGCAAGGGGAGTGTGGATTGAAAT # Left flank : GGATGGTTATCCGCCGTTTCTATGGAAGTAAGGAGGAAAGGGCATGCTTGTATTAGTAACTTATGATGTTTCAACTGAAACCATGGCAGGGAAAAAACGGCTGAGGCATGTTGCAAAAAAATGTTTGTCATACGGACAGCGTGTTCAAAATTCAGTCTTTGAGTGCAATATTGACTGGAGTCAATATCTCAATTTGCAAAACGAATTGAAAACAATTATTAATACAAAAGAAGACAGCTTACGATTTTATAACCTGGGTAATAATTACTCAGAAAAAGTCATTCATATTGGGGCTAAACCTAGTATTGATTTAGAAGGAGATTTAATCATATAGAGTGGTAGGTGGAATTGGTGCGAAACACAAGCGAACATGAAATCGGTGAAAGGTTCGCACCAGAAGTCCAAAAGTTTTCTCTGTGAACTCGGCATTATTGGGCAACCGATAATCTGCCAAACACAAGATATGCTTTTAAAAACTATTTTTTTGAGCAAGTCTTGCG # Right flank : TTTGGAGTAATCGGTTTTGATGATTTTAAATGTTGCTTCTGCCACTGCATTGTCATAGGGACAGCCTTTCATGCTCAAAGAACGGCGGATGTGAAAGGTCTCAAGTGTTTCCTCCAGAGTCTTGTTCTTAAATTCATTTCCACGGTCTGTATGGAAAATCTGTATTTTATCCAGATTAACATTGACTCTGGAAAAAGCTTTGCTTACCAGTGCAGCATCTTTGTTCTTTCCTGCACTGTAACCGATGATTTCCCGGTTAAACAAATCAACAAGCACACAGATGTAATTCCAGCTGTTTCCTGCCCTTACATAGGTCAAATCACTGACTACTACGTTATATTGCGGCTGGTCAGAAAATTCCCGGTTTACTATGTTATGCACTTTGGATTCATTGCATTTATCAATATGCGGCTTATATTGTACCACCGTATAGGAAGAAACAAGCCCTTCCTGTTTCATGATCCGCCCAATGCGCTGGCGGGATACTACGAAGCCCTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGCAAGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA //